Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.2e-83 313.2 167 100.0
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 1.4e-58 229.9 169 71.6
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 4.1e-42 175.3 168 56.5
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.6e-41 172.6 173 55.5
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 2.6e-41 172.6 171 55.6
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 7.6e-41 171.0 173 54.9
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 2.9e-40 169.1 169 55.0
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 6.5e-40 167.9 177 52.0
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 8.5e-40 167.5 172 55.8
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 5.5e-39 164.9 174 51.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 7.2e-39 164.5 171 53.8
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.1e-38 162.9 171 53.8
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.0e-37 160.6 174 51.7
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 3.0e-37 159.1 167 52.1
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 5.1e-37 158.3 173 51.4
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 1.1e-36 157.1 173 48.6
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.9e-36 156.4 174 46.6
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 7.4e-36 154.5 168 51.8
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 7.4e-36 154.5 172 48.8
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 1.3e-35 153.7 167 47.9
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.7e-35 153.3 169 52.1
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 2.2e-35 152.9 172 47.1
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 2.8e-35 152.5 167 46.1
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 2.8e-35 152.5 172 50.0
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.7e-35 152.1 172 48.3
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 4.8e-35 151.8 166 45.8
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 6.3e-35 151.4 172 51.2
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 8.2e-35 151.0 166 47.0
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 1.1e-34 150.6 174 48.9
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.4e-34 150.2 168 49.4
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.8e-34 149.8 163 47.9
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.8e-34 149.8 163 47.9
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.1e-34 149.1 165 47.3
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.1e-34 149.1 157 50.3
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 3.1e-34 149.1 168 51.2
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 4.1e-34 148.7 167 47.9
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 6.9e-34 147.9 171 46.8
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 9.1e-34 147.5 174 50.6
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 9.1e-34 147.5 170 46.5
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.2e-33 147.1 163 47.9
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.2e-33 147.1 174 49.4
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.2e-33 147.1 168 49.4
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.5e-33 146.7 174 48.9
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.5e-33 146.7 167 47.3
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 3.4e-33 145.6 163 47.2
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 4.5e-33 145.2 168 48.2
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 5.9e-33 144.8 163 47.2
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 5.9e-33 144.8 163 47.2
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 5.9e-33 144.8 163 47.2
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.9e-33 144.8 174 48.9
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 5.9e-33 144.8 166 48.8
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 7.7e-33 144.4 172 48.3
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.7e-32 143.3 167 46.1
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 2.2e-32 142.9 154 50.6
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 2.2e-32 142.9 171 47.4
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 3.8e-32 142.1 174 45.4
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 5.0e-32 141.7 163 47.9
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 5.0e-32 141.7 163 47.9
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 8.5e-32 141.0 163 47.9
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.1e-31 140.6 152 47.4
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 2.5e-31 139.4 152 47.4
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 7.2e-31 137.9 161 46.6
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 7.2e-31 137.9 176 46.6
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 7.2e-31 137.9 171 44.4
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.2e-30 137.1 183 44.8
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.2e-30 137.1 168 45.8
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 1.2e-30 137.1 176 46.6
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.6e-30 136.7 168 45.2
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.6e-30 136.7 171 45.6
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 2.7e-30 136.0 168 47.0
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 6.1e-30 134.8 163 46.0
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 7.9e-30 134.4 172 47.7
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 1.8e-29 133.3 167 45.5
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.3e-29 132.9 167 47.9
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 6.7e-29 131.3 163 45.4
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.5e-28 130.2 169 42.0
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 2.6e-28 129.4 170 43.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 3.3e-28 129.0 137 48.2
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 9.7e-28 127.5 167 44.3
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 6.3e-27 124.8 160 44.4
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 1.1e-26 124.0 170 45.9
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.1e-26 124.0 164 44.5
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.8e-26 123.2 140 47.1
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 9.1e-26 120.9 165 39.4
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.4e-25 119.0 163 44.2
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.3e-24 117.1 169 43.8
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 8.5e-24 114.4 166 41.6
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 7.2e-23 111.3 165 40.0
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 8.8e-21 104.4 143 38.5
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 4.8e-19 98.6 145 42.1
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 6.3e-19 98.2 129 43.4
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 2.4e-18 96.3 169 36.7
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 7.0e-18 94.7 167 37.7
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 2.6e-17 92.8 151 41.7
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 4.5e-17 92.0 120 44.2
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.0e-16 90.9 151 41.1
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.2e-16 89.7 127 42.5
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 7.2e-15 84.7 77 63.6
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 2.2e-11 73.2 134 31.3
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 4.1e-10 68.9 61 59.0
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 5.3e-10 68.6 177 29.9
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 7.0e-10 68.2 130 33.8
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 3.8e-08 62.4 75 44.0
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.1e-07 60.8 181 28.7


User provided reference genes

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