Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0433191 Helianthus annuus HOM05D011335 ORTHO05D013889 0.0e+00 1432.9 712 100.0
Lsat_1_v5_gn_8_141741 Lactuca sativa HOM05D011335 ORTHO05D013889 4.1e-67 260.4 287 51.2
HanXRQChr16g0531191 Helianthus annuus HOM05D009775 ORTHO05D011458 1.6e-66 258.5 630 29.7
HanXRQChr12g0359091 Helianthus annuus HOM05D014416 ORTHO05D011458 4.0e-62 243.8 696 29.0
Lsat_1_v5_gn_7_72541 Lactuca sativa HOM05D011335 ORTHO05D013889 5.9e-58 229.9 215 57.2
HanXRQChr01g0028051 Helianthus annuus HOM05D014416 ORTHO05D011458 5.5e-56 223.4 703 28.9
HanXRQChr02g0055151 Helianthus annuus HOM05D011335 ORTHO05D013889 5.5e-56 223.4 358 37.2
HanXRQChr14g0445841 Helianthus annuus HOM05D014416 ORTHO05D011458 9.4e-56 222.6 702 28.9
Lsat_1_v5_gn_8_4920 Lactuca sativa HOM05D011335 ORTHO05D013889 1.3e-52 212.2 422 35.5
Lsat_1_v5_gn_5_147040 Lactuca sativa HOM05D011335 ORTHO05D013889 1.7e-52 211.8 435 34.9
Lsat_1_v5_gn_5_65960 Lactuca sativa HOM05D011335 ORTHO05D013889 4.0e-46 190.7 326 34.7
HanXRQChr14g0450971 Helianthus annuus HOM05D014416 ORTHO05D011458 4.4e-45 187.2 701 27.5
HanXRQChr09g0239111 Helianthus annuus HOM05D009775 ORTHO05D011458 9.8e-45 186.0 188 45.2
HanXRQChr12g0375161 Helianthus annuus HOM05D011335 ORTHO05D013889 5.9e-42 176.8 238 40.8
Lsat_1_v5_gn_6_41521 Lactuca sativa HOM05D000056 ORTHO05D000019 7.3e-40 169.9 307 43.0
Lsat_1_v5_gn_0_40461 Lactuca sativa HOM05D009001 ORTHO05D011396 1.0e-38 166.0 744 22.2
HanXRQChr01g0030191 Helianthus annuus HOM05D009775 ORTHO05D011458 2.2e-36 158.3 257 37.7
HanXRQChr02g0055161 Helianthus annuus HOM05D009775 ORTHO05D011458 3.7e-36 157.5 166 42.8
HanXRQChr09g0239101 Helianthus annuus HOM05D011335 ORTHO05D013889 1.6e-31 142.1 190 39.5
HanXRQChr02g0042221 Helianthus annuus HOM05D009775 ORTHO05D011458 4.0e-30 137.5 215 33.0
HanXRQChr15g0468421 Helianthus annuus HOM05D009775 ORTHO05D011458 4.0e-30 137.5 215 33.0
HanXRQChr10g0315921 Helianthus annuus HOM05D011335 ORTHO05D013889 2.2e-28 131.7 399 31.1
HanXRQChr11g0340571 Helianthus annuus HOM05D009775 ORTHO05D011458 1.2e-26 125.9 215 31.6
HanXRQChr16g0527631 Helianthus annuus HOM05D009775 ORTHO05D011458 3.9e-25 120.9 407 26.3
ECA246G0066 Erigeron canadensis HOM05D009775 ORTHO05D011458 5.6e-24 117.1 167 38.9
HanXRQChr16g0527641 Helianthus annuus HOM05D009775 ORTHO05D013889 1.1e-22 112.8 147 46.9
Lsat_1_v5_gn_1_90641 Lactuca sativa HOM05D009001 ORTHO05D011396 1.3e-20 105.9 174 32.2
HanXRQChr11g0340581 Helianthus annuus HOM05D009775 ORTHO05D011458 3.7e-20 104.4 137 42.3
Lsat_1_v5_gn_4_119420 Lactuca sativa HOM05D009001 ORTHO05D011396 6.6e-17 93.6 191 29.8
ECA234G1155 Erigeron canadensis HOM05D009001 ORTHO05D011396 5.6e-16 90.5 347 25.6
HanXRQChr12g0359081 Helianthus annuus HOM05D014416 ORTHO05D011458 6.2e-15 87.0 144 31.2
HanXRQChr11g0345391 Helianthus annuus HOM05D009775 ORTHO05D013889 2.4e-14 85.1 270 25.9
ECA238G2699 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.8e-14 83.6 140 33.6
Lsat_1_v5_gn_1_101500 Lactuca sativa HOM05D009001 ORTHO05D011396 1.5e-13 82.4 129 31.8
Lsat_1_v5_gn_2_26020 Lactuca sativa HOM05D011335 ORTHO05D230817 2.0e-13 82.0 69 58.0
Lsat_1_v5_gn_3_26920 Lactuca sativa HOM05D009001 ORTHO05D013330 1.3e-12 79.3 112 33.0
Lsat_1_v5_gn_4_85540 Lactuca sativa HOM05D009001 ORTHO05D011396 1.3e-12 79.3 209 27.3
ECA234G3421 Erigeron canadensis HOM05D009775 ORTHO05D011458 1.7e-12 79.0 127 34.6
Lsat_1_v5_gn_9_102361 Lactuca sativa HOM05D009001 ORTHO05D011396 1.1e-11 76.3 132 32.6
Lsat_1_v5_gn_3_125401 Lactuca sativa HOM05D009001 ORTHO05D011396 3.2e-11 74.7 154 31.8
Lsat_1_v5_gn_5_59900 Lactuca sativa HOM05D009001 ORTHO05D011396 3.2e-11 74.7 411 25.1
ECA234G0032 Erigeron canadensis HOM05D055492 ORTHO05D000062 9.3e-11 73.2 247 25.1
ECA236G2459 Erigeron canadensis HOM05D009001 ORTHO05D011396 2.1e-10 72.0 466 21.2
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 1.3e-09 69.3 370 22.7
Lsat_1_v5_gn_6_78300 Lactuca sativa HOM05D011335 ORTHO05D013889 3.0e-09 68.2 101 40.6
ECA248G3750 Erigeron canadensis HOM05D009001 ORTHO05D011396 6.6e-09 67.0 335 23.6
Lsat_1_v5_gn_8_20701 Lactuca sativa HOM05D011335 ORTHO05D013889 6.6e-09 67.0 101 36.6
Lsat_1_v5_gn_5_156701 Lactuca sativa HOM05D011335 ORTHO05D229567 8.7e-09 66.6 234 29.9
EL10As4g23378 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-08 66.2 177 28.2
HanXRQChr10g0296371 Helianthus annuus HOM05D009775 ORTHO05D219877 1.1e-08 66.2 60 55.0
Ca_19281_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.5e-08 65.9 184 24.5
ECA236G1401 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-08 65.9 387 24.8
ECA247G0191 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.9e-08 65.5 135 28.9
Ca_23926_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 7.3e-08 63.5 184 23.9
Lsat_1_v5_gn_5_56341 Lactuca sativa HOM05D011335 ORTHO05D013889 7.3e-08 63.5 61 44.3
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 2.1e-07 62.0 177 26.6
ECA240G4466 Erigeron canadensis HOM05D000539 ORTHO05D000233 2.1e-07 62.0 200 24.5
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-07 62.0 204 27.5
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-07 62.0 204 27.5
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-07 62.0 204 27.5
SGA_v2.0_scaffold191G40501 Striga asiatica HOM05D002644 ORTHO05D003267 2.1e-07 62.0 178 20.2
Ca_02486_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.6e-07 61.2 188 23.9
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 3.6e-07 61.2 202 27.7
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 4.8e-07 60.8 180 26.1
Ca_04791_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.8e-07 60.8 184 23.4
Ca_05353_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.8e-07 60.8 184 23.4
Ca_18593_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.8e-07 60.8 184 23.4
HanXRQChr09g0262931 Helianthus annuus HOM05D000539 ORTHO05D000592 4.8e-07 60.8 199 24.6
HanXRQChr10g0317561 Helianthus annuus HOM05D000539 ORTHO05D000592 4.8e-07 60.8 199 24.6
HanXRQChr14g0441961 Helianthus annuus HOM05D000539 ORTHO05D000592 4.8e-07 60.8 199 24.6
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 4.8e-07 60.8 204 27.0
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 4.8e-07 60.8 204 27.0
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 4.8e-07 60.8 204 27.0
EL10Ac5g12071 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-06 59.7 118 31.4
Ca_11988_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.8e-06 58.9 185 23.8
Ca_19145_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.8e-06 58.9 467 21.8
Ca_23902_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.8e-06 58.9 184 23.4
Ca_05401_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 2.4e-06 58.5 185 24.3
Lsat_1_v5_gn_4_117321 Lactuca sativa HOM05D000607 ORTHO05D003284 2.4e-06 58.5 67 47.8
Sed0024905 Sechium edule HOM05D000539 ORTHO05D000592 2.4e-06 58.5 95 30.5
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 3.1e-06 58.2 146 25.3
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 3.1e-06 58.2 146 25.3
Lsat_1_v5_gn_2_52861 Lactuca sativa HOM05D000016 ORTHO05D000109 4.0e-06 57.8 79 32.9
Ca_20463_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.3e-06 57.4 184 22.8
HanXRQChr16g0505551 Helianthus annuus HOM05D009775 ORTHO05D011458 5.3e-06 57.4 88 38.6
Sed0026544 Sechium edule HOM05D000539 ORTHO05D000592 5.3e-06 57.4 95 30.5
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.9e-06 57.0 188 22.9
Sed0025490 Sechium edule HOM05D000539 ORTHO05D000592 6.9e-06 57.0 94 30.9
ECA236G3736 Erigeron canadensis HOM05D000539 ORTHO05D000233 9.0e-06 56.6 200 24.0
Medtr4g043785 Medicago truncatula HOM05D002644 ORTHO05D018018 9.0e-06 56.6 182 25.8


User provided reference genes

Program Settings