Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 8.9e-134 480.3 252 100.0
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 5.8e-117 424.5 251 85.7
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.5e-112 409.1 234 88.5
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 9.3e-107 390.6 245 78.8
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 2.7e-106 389.0 245 78.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.7e-105 386.3 245 78.0
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.9e-105 385.2 245 78.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.9e-104 382.9 245 75.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 9.6e-104 380.6 257 75.1
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 75.9
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.8e-103 379.0 245 78.4
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.8e-103 379.0 243 75.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.8e-103 378.3 243 76.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 6.2e-103 377.9 243 74.9
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.1e-102 377.1 245 75.1
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-102 377.1 245 74.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.8e-102 376.3 243 74.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.8e-102 376.3 241 76.8
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 2.4e-102 375.9 249 76.3
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 6.9e-102 374.4 241 76.3
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 6.9e-102 374.4 245 74.3
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 9.0e-102 374.0 245 74.3
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.0e-101 372.9 246 72.0
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 3.4e-101 372.1 243 73.7
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 3.4e-101 372.1 243 73.3
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.4e-101 372.1 245 74.3
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 4.5e-101 371.7 240 76.2
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 5.8e-101 371.3 243 73.3
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 5.8e-101 371.3 245 74.7
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 5.8e-101 371.3 243 72.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 7.6e-101 370.9 245 73.9
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 9.9e-101 370.5 245 73.9
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 9.9e-101 370.5 245 73.9
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.3e-100 370.2 241 74.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.3e-100 370.2 247 72.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-100 369.4 248 72.2
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 2.2e-100 369.4 248 72.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.2e-100 369.4 245 74.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.8e-100 368.6 245 77.6
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 3.8e-100 368.6 245 73.9
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.8e-100 368.6 245 74.3
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 4.9e-100 368.2 243 72.8
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 6.4e-100 367.9 243 71.2
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 8.4e-100 367.5 243 72.8
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 8.4e-100 367.5 243 72.8
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 8.4e-100 367.5 243 72.8
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.4e-100 367.5 245 72.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.1e-99 367.1 245 73.1
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.9e-99 366.3 245 73.1
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.4e-99 365.9 247 72.9
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.4e-99 365.9 247 72.9
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.2e-99 365.5 243 72.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.2e-99 365.5 246 72.8
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 4.2e-99 365.2 248 72.2
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 4.2e-99 365.2 245 73.9
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 5.4e-99 364.8 245 72.7
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.2e-98 363.6 245 73.9
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.7e-98 362.5 245 72.7
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.5e-98 362.1 245 71.4
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 3.5e-98 362.1 243 72.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 7.9e-98 360.9 243 72.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.0e-97 360.5 252 72.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.0e-97 360.5 245 73.1
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.3e-97 360.1 248 71.8
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.0e-97 359.0 243 72.0
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.0e-97 359.0 245 73.1
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.0e-97 359.0 245 71.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 5.1e-97 358.2 245 73.1
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 6.7e-97 357.8 245 71.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 5.6e-96 354.8 245 70.6
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.8e-95 352.4 245 71.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.4e-94 349.4 244 68.9
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 3.1e-94 349.0 262 66.4
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 5.3e-94 348.2 241 73.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.0e-93 346.3 243 70.4
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 3.4e-93 345.5 245 71.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.5e-88 330.1 241 69.3
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.3e-88 328.9 208 78.4
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.3e-88 328.9 247 67.2
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.3e-88 328.6 247 67.2
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 2.1e-87 326.2 245 66.1
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.8e-86 323.2 245 66.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 4.0e-86 322.0 240 67.9
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.6e-85 319.3 217 73.3
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.4e-85 318.9 208 74.0
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 4.5e-85 318.5 201 76.6
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 7.6e-85 317.8 245 65.3
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 7.1e-83 311.2 211 73.5
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 9.3e-83 310.8 246 63.4
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.7e-81 304.3 198 71.2
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 5.7e-80 301.6 184 81.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.3e-76 290.4 241 61.0
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.9e-76 289.3 201 72.6
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 3.8e-76 288.9 196 67.3
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 9.4e-75 284.3 245 61.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.6e-74 283.5 247 61.1
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 4.1e-70 268.9 240 60.4
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.4e-67 260.4 241 54.8
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.1e-66 256.5 251 51.0
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 6.7e-65 251.5 263 56.3
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.9e-60 236.1 238 50.4
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 5.5e-59 231.9 159 69.8
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.2e-58 230.7 239 49.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.6e-56 223.0 236 45.8
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 6.3e-55 218.4 201 58.7
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.0e-49 201.1 150 66.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.8e-49 200.3 159 64.8
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 8.8e-49 198.0 150 66.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.6e-48 196.4 117 79.5
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 4.4e-48 195.7 151 60.3
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-47 193.4 121 77.7
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.4e-46 189.9 122 71.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.9e-36 156.4 119 68.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 9.8e-32 141.4 92 73.9
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.8e-31 139.8 231 37.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 8.3e-31 138.3 91 71.4
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 9.2e-30 134.8 94 69.1
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.4e-17 94.4 71 63.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.2e-15 87.0 147 42.9
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.3e-07 61.2 38 71.1


User provided reference genes

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