Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0431911 Helianthus annuus HOM05D007242 ORTHO05D009089 3.5e-75 285.8 275 100.0
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 3.1e-55 219.5 160 74.4
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 2.7e-27 126.7 165 49.7
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 5.3e-23 112.5 162 44.4
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 1.7e-21 107.5 139 47.5
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 6.5e-21 105.5 132 48.5
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 8.5e-21 105.1 138 47.8
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 8.5e-21 105.1 134 48.5
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.1e-20 104.8 136 45.6
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 2.5e-20 103.6 110 51.8
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 3.2e-20 103.2 128 48.4
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 7.2e-20 102.1 161 45.3
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.2e-19 101.3 132 46.2
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.6e-19 100.9 148 43.9
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 1.6e-19 100.9 116 49.1
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 4.7e-19 99.4 144 43.8
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 7.9e-19 98.6 97 51.5
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 7.9e-19 98.6 112 48.2
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 1.0e-18 98.2 112 50.9
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 1.4e-18 97.8 157 38.2
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.4e-18 97.8 141 41.1
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 6.7e-18 95.5 137 43.1
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 6.7e-18 95.5 128 45.3
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 1.1e-17 94.7 163 38.7
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 1.1e-17 94.7 122 45.1
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 1.1e-17 94.7 134 44.0
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 1.5e-17 94.4 110 50.9
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 1.5e-17 94.4 131 42.7
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 1.5e-17 94.4 161 41.6
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 2.0e-17 94.0 97 52.6
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 2.6e-17 93.6 143 42.7
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 2.6e-17 93.6 140 40.0
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 3.3e-17 93.2 130 46.2
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 4.4e-17 92.8 144 39.6
COL.COLO4_22144 Corchorus olitorius HOM05D007242 ORTHO05D009089 5.7e-17 92.4 102 48.0
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 5.7e-17 92.4 108 50.0
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 7.4e-17 92.0 137 40.1
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 9.7e-17 91.7 137 42.3
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 9.7e-17 91.7 161 42.2
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 9.7e-17 91.7 111 46.8
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 1.3e-16 91.3 130 41.5
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 1.3e-16 91.3 131 43.5
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 1.7e-16 90.9 126 45.2
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 3.7e-16 89.7 135 39.3
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 4.8e-16 89.4 106 46.2
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 4.8e-16 89.4 114 43.9
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 6.3e-16 89.0 95 50.5
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 8.2e-16 88.6 97 50.5
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 1.1e-15 88.2 143 39.2
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 1.1e-15 88.2 127 41.7
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 3.1e-15 86.7 132 37.9
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 4.1e-15 86.3 96 52.1
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 4.1e-15 86.3 135 40.7
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 1.2e-14 84.7 143 38.5
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 1.6e-14 84.3 134 38.8
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 2.0e-14 84.0 110 44.5
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 3.5e-14 83.2 131 39.7
CARHR143890 Cardamine hirsuta HOM05D007242 ORTHO05D009089 4.5e-14 82.8 124 42.7
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 4.5e-14 82.8 141 39.7
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 5.9e-14 82.4 126 40.5
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 5.9e-14 82.4 99 43.4
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 7.7e-14 82.0 99 43.4
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 1.0e-13 81.6 141 38.3
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.3e-13 81.3 141 38.3
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 1.3e-13 81.3 96 45.8
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 1.3e-13 81.3 96 46.9
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 1.7e-13 80.9 99 46.5
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 2.2e-13 80.5 137 40.1
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 2.2e-13 80.5 98 44.9
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 2.9e-13 80.1 119 43.7
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 2.9e-13 80.1 144 38.9
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 3.8e-13 79.7 146 36.3
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 5.0e-13 79.3 119 43.7
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 8.5e-13 78.6 114 43.9
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 8.5e-13 78.6 114 43.9
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 1.1e-12 78.2 127 40.2
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 1.5e-12 77.8 156 35.9
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 2.5e-12 77.0 134 39.6
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 3.2e-12 76.6 136 37.5
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 9.4e-12 75.1 133 37.6
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 3.6e-11 73.2 39 89.7
Glyma.08G053867 Glycine max HOM05D007242 ORTHO05D009089 3.7e-08 63.2 107 33.6
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 8.2e-08 62.0 39 74.4
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 1.8e-07 60.8 35 77.1


User provided reference genes

Program Settings