Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 4.8e-55 217.6 113 100.0
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 8.3e-31 137.1 79 84.8
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 2.9e-28 128.6 77 84.4
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.4e-25 119.8 81 67.9
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 8.9e-25 117.1 81 67.9
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 2.6e-24 115.5 85 64.7
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 3.4e-24 115.2 79 73.4
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 5.7e-24 114.4 85 68.2
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 9.8e-24 113.6 79 68.4
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 9.8e-24 113.6 78 71.8
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.3e-23 113.2 79 68.4
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 1.7e-23 112.8 78 70.5
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 2.2e-23 112.5 79 67.1
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 2.2e-23 112.5 78 70.5
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 4.9e-23 111.3 91 61.5
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 4.9e-23 111.3 79 63.3
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 4.9e-23 111.3 79 67.1
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 4.9e-23 111.3 78 70.5
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 6.4e-23 110.9 82 67.1
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 8.3e-23 110.5 79 68.4
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 8.3e-23 110.5 79 69.6
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.1e-22 110.2 78 65.4
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 1.8e-22 109.4 79 65.8
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.8e-22 109.4 78 67.9
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.8e-22 109.4 79 65.8
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.8e-22 109.4 79 65.8
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 2.4e-22 109.0 79 64.6
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 4.1e-22 108.2 79 65.8
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 5.4e-22 107.8 79 67.1
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 7.0e-22 107.5 79 68.4
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 7.0e-22 107.5 78 65.4
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 1.2e-21 106.7 90 60.0
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.6e-21 106.3 85 57.6
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.6e-21 106.3 84 59.5
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 1.6e-21 106.3 81 60.5
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 2.0e-21 105.9 79 63.3
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 2.0e-21 105.9 79 63.3
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 2.0e-21 105.9 78 65.4
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 2.7e-21 105.5 78 67.9
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.5e-21 105.1 81 63.0
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 3.5e-21 105.1 78 66.7
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 4.6e-21 104.8 79 65.8
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 4.6e-21 104.8 79 60.8
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 5.9e-21 104.4 82 62.2
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 7.8e-21 104.0 78 62.8
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 7.8e-21 104.0 81 61.7
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 7.8e-21 104.0 79 64.6
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.0e-20 103.6 81 65.4
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 1.3e-20 103.2 90 58.9
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.3e-20 103.2 79 64.6
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 1.3e-20 103.2 79 64.6
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 2.3e-20 102.4 78 62.8
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.3e-20 102.4 81 64.2
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.0e-20 102.1 78 66.7
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 3.9e-20 101.7 79 59.5
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 5.0e-20 101.3 81 58.0
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 6.6e-20 100.9 79 58.2
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 6.6e-20 100.9 78 64.1
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.1e-19 100.1 78 65.4
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.5e-19 99.8 79 58.2
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.5e-19 99.8 79 57.0
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.5e-19 99.8 79 57.0
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.5e-19 99.8 79 57.0
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.5e-19 99.8 78 59.0
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.9e-19 99.4 86 54.7
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 3.3e-19 98.6 79 57.0
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 3.3e-19 98.6 79 63.3
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 4.3e-19 98.2 85 60.0
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 5.6e-19 97.8 79 60.8
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 7.3e-19 97.4 79 57.0
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 9.5e-19 97.1 78 60.3
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 9.5e-19 97.1 79 57.0
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.6e-18 96.3 79 55.7
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 4.7e-18 94.7 79 60.8
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 8.0e-18 94.0 108 49.1
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 8.0e-18 94.0 78 57.7
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 8.0e-18 94.0 89 52.8
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 1.4e-17 93.2 79 55.7
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.3e-17 92.4 78 57.7
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 8.9e-17 90.5 85 52.9
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 2.0e-16 89.4 79 58.2
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 2.6e-16 89.0 99 47.5
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 2.6e-16 89.0 79 53.2
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 2.9e-15 85.5 79 53.2
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 8.3e-15 84.0 56 66.1
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.4e-14 83.2 75 49.3
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.9e-14 82.8 70 54.3
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.9e-14 82.8 60 65.0
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.0e-12 77.0 56 66.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 2.3e-12 75.9 57 63.2
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 3.0e-12 75.5 57 64.9
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 3.9e-12 75.1 58 58.6
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.9e-11 72.8 77 49.4
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.9e-11 72.8 77 49.4
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 5.6e-11 71.2 57 57.9
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 7.3e-11 70.9 78 42.3
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.2e-10 70.1 56 55.4
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.2e-10 70.1 51 60.8
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 1.8e-09 66.2 58 50.0
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 3.1e-09 65.5 38 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 4.0e-09 65.1 54 55.6
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.0e-09 65.1 52 59.6
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 4.4e-08 61.6 58 53.4
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 4.9e-07 58.2 54 44.4


User provided reference genes

Program Settings