Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0430171 Helianthus annuus HOM05D000275 ORTHO05D000181 1.5e-58 229.2 107 100.0
HanXRQChr15g0489491 Helianthus annuus HOM05D000275 ORTHO05D000181 1.1e-24 116.7 67 85.1
HanXRQChr01g0018461 Helianthus annuus HOM05D000275 ORTHO05D000181 5.1e-14 81.3 52 71.2
ECA248G0963 Erigeron canadensis HOM05D000275 ORTHO05D000181 7.4e-13 77.4 49 69.4
Lsat_1_v5_gn_1_89881 Lactuca sativa HOM05D000275 ORTHO05D000181 9.6e-13 77.0 51 66.7
Actinidia31722 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.1e-11 72.0 51 62.7
CSS0044170 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 4.0e-11 71.6 51 58.8
Potri.001G232900 Populus trichocarpa HOM05D000275 ORTHO05D000181 5.3e-11 71.2 51 58.8
vmacro22473 Vaccinium macrocarpon HOM05D000275 ORTHO05D000181 5.3e-11 71.2 54 63.0
MSTRG.4993 Avicennia marina HOM05D000275 ORTHO05D000181 9.0e-11 70.5 52 57.7
MSTRG.28109 Avicennia marina HOM05D000275 ORTHO05D000181 1.2e-10 70.1 52 57.7
GSVIVG01006001001 Vitis vinifera HOM05D000275 ORTHO05D000181 1.5e-10 69.7 49 63.3
Dinv43951 Davidia involucrata HOM05D000275 ORTHO05D000181 2.0e-10 69.3 51 60.8
Potri.001G232700 Populus trichocarpa HOM05D000275 ORTHO05D000181 2.0e-10 69.3 51 56.9
Potri.009G025200 Populus trichocarpa HOM05D000275 ORTHO05D000181 2.0e-10 69.3 48 62.5
Sabra09G0016700 Salix brachista HOM05D000275 ORTHO05D000181 2.0e-10 69.3 48 60.4
Nn7g35873 Nelumbo nucifera HOM05D000275 ORTHO05D000181 5.8e-10 67.8 49 61.2
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 5.8e-10 67.8 50 62.0
Phvul.005G045100 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 1.3e-09 66.6 50 60.0
TAR623G0763 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.7e-09 66.2 51 54.9
CSS0001255 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 2.2e-09 65.9 47 59.6
SalBow4G2860 Salvia bowleyana HOM05D000275 ORTHO05D000181 2.9e-09 65.5 52 55.8
CiPaw.15G186600 Carya illinoinensis HOM05D000275 ORTHO05D000181 6.5e-09 64.3 49 55.1
Lalb_Chr20g0108251 Lupinus albus HOM05D000275 ORTHO05D000181 6.5e-09 64.3 48 58.3
Haze_03292 Corylus avellana HOM05D000275 ORTHO05D000181 8.4e-09 63.9 51 51.0
Glyma.08G161700 Glycine max HOM05D000275 ORTHO05D000181 8.4e-09 63.9 49 59.2
Glyma.15G265900 Glycine max HOM05D000275 ORTHO05D000181 8.4e-09 63.9 49 59.2
PGR042G3528 Punica granatum HOM05D000275 ORTHO05D000181 8.4e-09 63.9 50 56.0
DCAR_015724 Daucus carota HOM05D000275 ORTHO05D000181 1.1e-08 63.5 51 52.9
arahy.Tifrunner.gnm1.ann1.EB1W4P Arachis hypogaea HOM05D000275 ORTHO05D000181 1.4e-08 63.2 49 59.2
Cfa010681 Carpinus fangiana HOM05D000275 ORTHO05D000181 2.5e-08 62.4 49 51.0
arahy.Tifrunner.gnm1.ann1.JFR3PY Arachis hypogaea HOM05D000275 ORTHO05D000181 3.2e-08 62.0 49 57.1
Psat1g130320 Pisum sativum HOM05D000275 ORTHO05D000181 3.2e-08 62.0 49 57.1
QL04p000796 Quercus lobata HOM05D000275 ORTHO05D000181 4.2e-08 61.6 49 53.1
Manes.13G030000 Manihot esculenta HOM05D000275 ORTHO05D000181 5.5e-08 61.2 48 52.1
ClCG09G003610 Citrullus lanatus HOM05D000275 ORTHO05D000181 7.1e-08 60.8 50 56.0
PGSC0003DMG400031127 Solanum tuberosum HOM05D000275 ORTHO05D000181 9.3e-08 60.5 51 52.9
CsaV3_7G031570 Cucumis sativus L. HOM05D000275 ORTHO05D000181 1.2e-07 60.1 48 58.3
Sed0020486 Sechium edule HOM05D000275 ORTHO05D000181 1.2e-07 60.1 51 49.0
Lj3g0025801 Lotus japonicus HOM05D000275 ORTHO05D000181 1.6e-07 59.7 49 53.1
MELO3C023497.2 Cucumis melo HOM05D000275 ORTHO05D000181 2.1e-07 59.3 48 56.2
Migut.O00702 Erythranthe guttata HOM05D000275 ORTHO05D000181 2.1e-07 59.3 49 53.1
Gohir.A12G210900 Gossypium hirsutum HOM05D000275 ORTHO05D000181 2.1e-07 59.3 46 54.3
Gorai.008G229100 Gossypium raimondii HOM05D000275 ORTHO05D000181 2.1e-07 59.3 46 54.3
MD00G1187200 Malus domestica HOM05D000275 ORTHO05D000181 2.1e-07 59.3 49 55.1
Atru.chr11.2720 Acer truncatum HOM05D000275 ORTHO05D000181 3.5e-07 58.5 46 52.2
Cc02_g26700 Coffea canephora HOM05D000275 ORTHO05D000181 3.5e-07 58.5 45 57.8
Lj3g0012102 Lotus japonicus HOM05D000275 ORTHO05D000181 3.5e-07 58.5 49 53.1
Migut.N01650 Erythranthe guttata HOM05D000275 ORTHO05D000181 4.6e-07 58.2 49 53.1
Hma1.2p1_0128F.1_g059960 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 4.6e-07 58.2 49 55.1
VMungo1080G1094 Vigna mungo HOM05D000275 ORTHO05D000181 4.6e-07 58.2 49 53.1
Ca_03265_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 6.0e-07 57.8 49 53.1
MBI04_g37006_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 6.0e-07 57.8 54 46.3
Prupe.2G000900 Prunus persica HOM05D000275 ORTHO05D000181 6.0e-07 57.8 49 53.1
TPR.G17317 Trifolium pratense HOM05D000275 ORTHO05D000181 6.0e-07 57.8 49 53.1
COL.COLO4_17112 Corchorus olitorius HOM05D000275 ORTHO05D000181 7.9e-07 57.4 46 52.2
Gohir.D12G213500 Gossypium hirsutum HOM05D000275 ORTHO05D000181 7.9e-07 57.4 46 52.2
Oeu024945.1 Olea europaea HOM05D000275 ORTHO05D000181 7.9e-07 57.4 46 54.3
Aqoxy1G00467 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 1.3e-06 56.6 49 51.0
Aqoxy4G02395 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 1.3e-06 56.6 50 48.0
Ciclev10033098m.g Citrus clementina HOM05D000275 ORTHO05D000181 1.8e-06 56.2 48 47.9
Duzib068G1363 Durio zibethinus HOM05D000275 ORTHO05D000181 1.8e-06 56.2 46 50.0
Eucgr.H04731 Eucalyptus grandis HOM05D000275 ORTHO05D000181 1.8e-06 56.2 46 50.0
Solyc01g081600.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 1.8e-06 56.2 51 49.0
Sopen01g033150 Solanum pennellii HOM05D000275 ORTHO05D000181 1.8e-06 56.2 51 49.0
CAN.G1361.15 Capsicum annuum HOM05D000275 ORTHO05D000181 2.3e-06 55.8 46 54.3
SGA_v2.0_scaffold95G28758 Striga asiatica HOM05D000275 ORTHO05D000181 2.3e-06 55.8 50 46.0
Medtr2g062600 Medicago truncatula HOM05D000275 ORTHO05D000181 3.9e-06 55.1 49 51.0
Migut.H00916 Erythranthe guttata HOM05D000275 ORTHO05D000181 5.1e-06 54.7 51 43.1
Thecc.03G234300 Theobroma cacao HOM05D000275 ORTHO05D000181 5.1e-06 54.7 45 48.9
Duzib205G0001 Durio zibethinus HOM05D000275 ORTHO05D000181 8.7e-06 53.9 47 44.7


User provided reference genes

Program Settings