Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0430081 Helianthus annuus HOM05D000290 ORTHO05D221646 8.9e-47 189.9 93 100.0
Prupe.8G142600 Prunus persica HOM05D000290 ORTHO05D007415 7.3e-09 63.9 35 80.0
RcHm_v2.0_Chr1g0363651 Rosa chinensis HOM05D000290 ORTHO05D007415 1.3e-08 63.2 35 77.1
FvH4_7g19760 Fragaria vesca HOM05D000290 ORTHO05D007415 1.6e-08 62.8 35 77.1
FAN03G2244 Fragaria x ananassa HOM05D000290 ORTHO05D007415 1.6e-08 62.8 35 77.1
FAN06G5088 Fragaria x ananassa HOM05D000290 ORTHO05D007415 1.6e-08 62.8 35 77.1
MD07G1176000 Malus domestica HOM05D000290 ORTHO05D007415 4.8e-08 61.2 35 74.3
CsaV3_5G036380 Cucumis sativus L. HOM05D000290 ORTHO05D007415 6.2e-08 60.8 45 62.2
ECA232G0301 Erigeron canadensis HOM05D000290 ORTHO05D007415 8.1e-08 60.5 35 74.3
arahy.Tifrunner.gnm1.ann1.AS9ABP Arachis hypogaea HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
arahy.Tifrunner.gnm1.ann1.IU7X6X Arachis hypogaea HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
CSS0015563 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
CSS0025800 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
DCAR_006445 Daucus carota HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.1e-07 60.1 35 71.4
Eucgr.G02820 Eucalyptus grandis HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
Lj5g0003555 Lotus japonicus HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
Os02g0805800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
Zm00001eb258280 Zea mays HOM05D000290 ORTHO05D007415 1.1e-07 60.1 35 71.4
HanXRQChr09g0246431 Helianthus annuus HOM05D000290 ORTHO05D007415 1.4e-07 59.7 35 77.1
Psat6g185080 Pisum sativum HOM05D000290 ORTHO05D007415 1.8e-07 59.3 35 71.4
TPR.G1810 Trifolium pratense HOM05D000290 ORTHO05D007415 1.8e-07 59.3 35 71.4
Cpa.g.sc53.63 Carica papaya HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 71.4
CiPaw.02G174700 Carya illinoinensis HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 71.4
CDE08G1592 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 71.4
Ca_10576_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 68.6
Cc09_g02000 Coffea canephora HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 71.4
MELO3C012436.2 Cucumis melo HOM05D000290 ORTHO05D007415 2.4e-07 58.9 45 60.0
Lalb_Chr06g0162261 Lupinus albus HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 68.6
Oeu034811.1 Olea europaea HOM05D000290 ORTHO05D007415 2.4e-07 58.9 35 71.4
CDE02G2717 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 3.1e-07 58.5 35 68.6
Aqoxy1G01252 Aquilegia oxysepala HOM05D000290 ORTHO05D007415 4.0e-07 58.2 35 71.4
Ciclev10030711m.g Citrus clementina HOM05D000290 ORTHO05D007415 4.0e-07 58.2 35 71.4
Lalb_Chr02g0142071 Lupinus albus HOM05D000290 ORTHO05D007415 4.0e-07 58.2 35 68.6
PGR142G4180 Punica granatum HOM05D000290 ORTHO05D007415 4.0e-07 58.2 35 71.4
SEGI_30113 Sequoiadendron giganteum HOM05D000290 ORTHO05D007415 4.0e-07 58.2 42 61.9
GSVIVG01016296001 Vitis vinifera HOM05D000290 ORTHO05D007415 4.0e-07 58.2 35 71.4
Gohir.A10G206900 Gossypium hirsutum HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
Gohir.D10G215000 Gossypium hirsutum HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
Gorai.011G240500 Gossypium raimondii HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
Hma1.2p1_0063F.1_g034380 Hydrangea macrophylla HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
Rhsim09G0040800 Rhododendron simsii HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
TWI63G0995 Tripterygium wilfordii HOM05D000290 ORTHO05D007415 5.3e-07 57.8 35 68.6
Atru.chr12.734 Acer truncatum HOM05D000290 ORTHO05D007415 6.9e-07 57.4 35 68.6
Actinidia03052 Actinidia chinensis HOM05D000290 ORTHO05D007415 9.0e-07 57.0 35 65.7
vmacro07077 Vaccinium macrocarpon HOM05D000290 ORTHO05D007415 9.0e-07 57.0 35 65.7
COL.COLO4_23704 Corchorus olitorius HOM05D000290 ORTHO05D007415 1.2e-06 56.6 35 65.7
Duzib106G1672 Durio zibethinus HOM05D000290 ORTHO05D007415 1.2e-06 56.6 35 65.7
Thecc.10G071500 Theobroma cacao HOM05D000290 ORTHO05D007415 1.2e-06 56.6 35 65.7
VMungo0720G0458 Vigna mungo HOM05D000290 ORTHO05D007415 1.2e-06 56.6 35 65.7
Hma1.2p1_0063F.1_g034410 Hydrangea macrophylla HOM05D000290 ORTHO05D007415 1.5e-06 56.2 34 67.6
Sed0009428 Sechium edule HOM05D000290 ORTHO05D007415 1.5e-06 56.2 45 60.0
ClCG05G020930 Citrullus lanatus HOM05D000290 ORTHO05D007415 2.0e-06 55.8 45 60.0
Nn2g10759 Nelumbo nucifera HOM05D000290 ORTHO05D007415 2.0e-06 55.8 35 68.6
Haze_16906 Corylus avellana HOM05D000290 ORTHO05D007415 3.4e-06 55.1 35 68.6
CANSAT56G0046 Cannabis sativa HOM05D000290 ORTHO05D007415 4.4e-06 54.7 37 67.6
Glyma.10G212000 Glycine max HOM05D000290 ORTHO05D007415 4.4e-06 54.7 35 62.9
Glyma.20G179100 Glycine max HOM05D000290 ORTHO05D007415 4.4e-06 54.7 35 62.9
Phvul.007G093900 Phaseolus vulgaris HOM05D000290 ORTHO05D007415 4.4e-06 54.7 35 62.9
QL08p056306 Quercus lobata HOM05D000290 ORTHO05D007415 4.4e-06 54.7 35 65.7
Medtr0224s0030 Medicago truncatula HOM05D000290 ORTHO05D007415 5.8e-06 54.3 35 68.6
Medtr1g095480 Medicago truncatula HOM05D000290 ORTHO05D007415 5.8e-06 54.3 35 68.6
Manes.07G104400 Manihot esculenta HOM05D000290 ORTHO05D007415 7.6e-06 53.9 35 62.9
SalBow3G1677 Salvia bowleyana HOM05D000290 ORTHO05D007415 7.6e-06 53.9 45 57.8
Cfa001614 Carpinus fangiana HOM05D000290 ORTHO05D007415 9.9e-06 53.5 35 65.7
AUR62037660 Chenopodium quinoa HOM05D000290 ORTHO05D007415 9.9e-06 53.5 35 65.7
AUR62041044 Chenopodium quinoa HOM05D000290 ORTHO05D007415 9.9e-06 53.5 35 65.7
Sc20g0001930 Simmondsia chinensis HOM05D000290 ORTHO05D007415 9.9e-06 53.5 35 65.7
TAR636G1312 Trochodendron aralioides HOM05D000290 ORTHO05D007415 9.9e-06 53.5 35 62.9


User provided reference genes

Program Settings