Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 7.0e-223 776.9 385 100.0
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 7.6e-161 570.9 310 88.7
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.4e-151 540.0 311 84.6
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 2.5e-135 486.1 307 75.6
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.2e-135 485.7 306 75.2
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.4e-133 480.3 306 73.9
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.0e-133 479.2 303 74.6
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.2e-132 477.2 306 73.2
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.3e-131 473.8 303 72.9
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.3e-131 473.8 303 73.6
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 5.3e-130 468.4 306 71.6
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 9.1e-130 467.6 308 72.4
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 2.0e-129 466.5 307 72.0
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 2.7e-129 466.1 319 71.5
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.0e-128 464.2 306 72.2
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.9e-128 462.6 335 66.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.1e-127 460.7 305 71.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 9.4e-127 457.6 307 71.3
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.2e-126 457.2 308 70.5
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.8e-125 453.4 306 70.9
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 3.0e-125 452.6 307 71.3
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 1.5e-124 450.3 307 71.0
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 3.4e-124 449.1 384 58.9
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.4e-124 449.1 296 70.9
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 3.4e-124 449.1 371 61.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 4.4e-124 448.7 304 69.7
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 5.7e-124 448.4 299 69.6
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 7.5e-124 448.0 307 68.1
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 7.5e-124 448.0 307 69.4
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.3e-123 447.2 307 67.4
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.3e-123 447.2 307 69.7
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 2.8e-123 446.0 305 71.5
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 3.7e-123 445.7 306 67.6
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 3.7e-123 445.7 308 69.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 6.3e-123 444.9 307 69.1
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 8.3e-123 444.5 305 69.5
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.4e-122 443.7 308 69.5
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.4e-122 443.7 307 68.4
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.8e-122 443.4 304 68.8
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 2.4e-122 443.0 302 69.9
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.1e-122 442.6 307 69.1
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 4.1e-122 442.2 307 69.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 4.1e-122 442.2 314 67.2
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 5.4e-122 441.8 306 70.6
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 9.1e-122 441.0 307 68.1
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 1.6e-121 440.3 307 68.4
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 2.0e-121 439.9 307 69.1
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 4.5e-121 438.7 303 69.3
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 7.7e-121 438.0 302 68.5
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.7e-120 436.8 305 67.2
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.3e-120 436.4 302 68.5
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 2.3e-120 436.4 307 67.8
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 3.8e-120 435.6 301 67.4
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 5.0e-120 435.3 303 67.7
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 5.0e-120 435.3 307 69.4
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 5.0e-120 435.3 303 68.0
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 6.5e-120 434.9 307 67.4
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.5e-119 433.7 301 66.8
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.9e-119 433.3 307 68.1
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 1.9e-119 433.3 296 68.6
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 2.5e-119 433.0 302 68.9
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 3.6e-118 429.1 306 66.7
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 4.7e-118 428.7 317 64.7
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 8.0e-118 427.9 308 67.5
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 3.0e-117 426.0 313 65.8
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 5.2e-117 425.2 328 64.0
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 5.2e-117 425.2 304 66.1
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 4.4e-116 422.2 280 73.2
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.3e-115 420.6 304 66.1
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.7e-115 420.2 306 65.7
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 4.9e-115 418.7 307 65.8
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.1e-114 417.5 306 65.0
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.7e-113 412.9 306 65.4
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 4.5e-113 412.1 338 60.7
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 4.5e-113 412.1 367 56.7
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 7.8e-113 411.4 314 65.6
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 1.0e-112 411.0 290 69.7
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.9e-112 409.5 306 64.4
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.9e-112 409.5 312 65.7
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 1.9e-111 406.8 307 63.2
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 5.6e-111 405.2 306 64.4
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.2e-110 404.1 304 64.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 4.7e-110 402.1 280 66.4
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.1e-110 401.7 281 69.0
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 3.0e-109 399.4 305 63.3
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 5.2e-109 398.7 306 63.1
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 8.9e-109 397.9 283 70.3
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 4.9e-107 392.1 303 63.4
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 2.5e-103 379.8 347 55.6
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 5.6e-103 378.6 319 60.2
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 9.5e-103 377.9 280 67.1
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 9.5e-103 377.9 280 67.1
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 3.6e-102 375.9 307 60.6
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 6.0e-97 358.6 303 59.1
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 5.6e-95 352.1 300 58.3
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.2e-94 350.9 296 58.8
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.7e-91 340.5 311 53.1
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 2.8e-86 323.2 300 54.7
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 6.2e-86 322.0 312 53.8
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 1.8e-85 320.5 283 59.7
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.4e-84 316.2 280 56.4
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 3.4e-84 316.2 297 54.9
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.4e-83 311.6 221 68.3
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.9e-82 310.5 316 52.2
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 3.0e-80 303.1 222 65.3
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 5.6e-79 298.9 222 64.9
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 6.9e-77 292.0 203 67.5
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 9.0e-77 291.6 198 69.2
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 6.4e-75 285.4 301 47.2
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.3e-70 271.2 190 71.1
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.2e-68 264.6 199 66.8
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.4e-66 257.7 201 61.2
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.2e-66 256.5 164 75.6
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 2.8e-62 243.4 214 55.1
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.4e-61 241.1 228 57.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.9e-55 220.7 395 35.9
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 6.2e-54 215.7 170 62.9
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 2.0e-52 210.7 153 61.4
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 4.5e-52 209.5 306 40.8
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 3.5e-49 199.9 211 49.8
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.3e-43 181.4 137 64.2
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.1e-41 172.6 129 65.9
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.4e-39 165.6 108 71.3
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.8e-37 161.0 299 34.1
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 2.2e-35 154.1 291 32.6
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 2.3e-32 144.1 113 61.9
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.3e-30 138.3 276 33.0
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.8e-27 126.7 81 70.4
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.1e-23 115.2 85 62.4
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.6e-15 87.4 81 56.8
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 3.1e-13 80.5 52 67.3
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 4.1e-13 80.1 72 52.8
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.7e-12 77.4 75 49.3
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 4.5e-12 76.6 117 39.3
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 9.4e-10 68.9 79 48.1
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.0e-08 65.5 55 50.9
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 2.2e-06 57.8 34 79.4


User provided reference genes

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