Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 2.4e-90 335.5 170 100.0
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 2.2e-59 232.6 125 94.4
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 2.8e-59 232.3 125 94.4
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 1.1e-58 230.3 125 93.6
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 4.4e-52 208.4 125 84.0
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 4.4e-52 208.4 125 84.0
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 4.9e-51 204.9 126 84.1
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 8.3e-51 204.1 128 79.7
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 1.4e-50 203.4 125 80.0
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 2.4e-50 202.6 125 80.8
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 7.0e-50 201.1 125 80.0
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 7.0e-50 201.1 125 79.2
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 1.6e-49 199.9 126 80.2
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 2.0e-49 199.5 125 80.8
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.0e-49 199.5 125 78.4
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.0e-49 199.5 125 78.4
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 3.5e-49 198.7 127 78.7
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 7.8e-49 197.6 125 78.4
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 7.8e-49 197.6 125 79.2
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.0e-48 197.2 125 77.6
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 1.0e-48 197.2 125 77.6
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 1.3e-48 196.8 125 76.8
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 1.7e-48 196.4 128 80.5
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 1.7e-48 196.4 125 79.2
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 2.3e-48 196.1 125 77.6
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 2.3e-48 196.1 127 76.4
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 3.0e-48 195.7 126 81.7
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 5.0e-48 194.9 124 77.4
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 5.0e-48 194.9 129 76.0
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 5.0e-48 194.9 129 76.0
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 6.6e-48 194.5 125 76.8
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 8.6e-48 194.1 126 77.8
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 1.1e-47 193.7 125 77.6
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 1.5e-47 193.4 126 77.0
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 1.5e-47 193.4 125 76.0
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 2.5e-47 192.6 126 77.8
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 3.3e-47 192.2 125 75.2
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 5.6e-47 191.4 126 76.2
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 9.5e-47 190.7 126 76.2
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 1.6e-46 189.9 127 78.0
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 2.1e-46 189.5 139 70.5
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 2.1e-46 189.5 125 73.6
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 2.8e-46 189.1 127 71.7
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 2.8e-46 189.1 127 77.2
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.8e-46 189.1 125 74.4
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 4.7e-46 188.3 125 74.4
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.0e-45 187.2 127 74.8
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 1.0e-45 187.2 125 73.6
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.4e-45 186.8 127 76.4
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 1.4e-45 186.8 125 72.8
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 1.8e-45 186.4 125 72.8
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 2.3e-45 186.0 125 72.0
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 2.3e-45 186.0 125 72.0
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 2.3e-45 186.0 125 72.8
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 3.1e-45 185.7 127 74.8
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 4.0e-45 185.3 126 73.0
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 5.2e-45 184.9 129 72.9
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 6.8e-45 184.5 127 72.4
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 6.8e-45 184.5 127 72.4
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 6.8e-45 184.5 145 63.4
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 6.8e-45 184.5 132 68.2
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 8.9e-45 184.1 126 73.8
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 1.2e-44 183.7 127 75.6
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 1.5e-44 183.3 128 72.7
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 2.0e-44 183.0 125 71.2
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 2.0e-44 183.0 138 67.4
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.6e-44 182.6 125 71.2
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.6e-44 182.6 125 72.0
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 3.4e-44 182.2 138 66.7
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 3.4e-44 182.2 125 71.2
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 3.4e-44 182.2 125 70.4
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 4.4e-44 181.8 129 73.6
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 4.4e-44 181.8 125 69.6
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 5.8e-44 181.4 125 71.2
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 5.8e-44 181.4 125 71.2
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 5.8e-44 181.4 125 72.0
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.3e-43 180.3 125 71.2
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 1.3e-43 180.3 125 71.2
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 1.3e-43 180.3 126 73.0
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 1.3e-43 180.3 125 70.4
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 1.7e-43 179.9 125 71.2
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 2.2e-43 179.5 125 70.4
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 2.2e-43 179.5 125 70.4
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 2.2e-43 179.5 125 70.4
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 2.2e-43 179.5 125 70.4
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.2e-43 179.5 125 71.2
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 2.9e-43 179.1 126 71.4
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 2.9e-43 179.1 125 70.4
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 3.7e-43 178.7 126 71.4
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 3.7e-43 178.7 125 71.2
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 3.7e-43 178.7 126 71.4
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 3.7e-43 178.7 125 72.0
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 3.7e-43 178.7 125 70.4
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 4.9e-43 178.3 125 69.6
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 4.9e-43 178.3 125 72.0
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 6.4e-43 177.9 125 70.4
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 6.4e-43 177.9 126 70.6
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 6.4e-43 177.9 126 70.6
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 6.4e-43 177.9 125 70.4
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 6.4e-43 177.9 125 70.4
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 6.4e-43 177.9 125 70.4
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 6.4e-43 177.9 138 64.5
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 1.9e-42 176.4 126 72.2
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 2.4e-42 176.0 125 70.4
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.4e-42 176.0 125 69.6
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 2.4e-42 176.0 125 69.6
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 5.4e-42 174.9 125 71.2
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 1.2e-41 173.7 125 69.6
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 1.2e-41 173.7 106 78.3
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 2.0e-41 172.9 126 67.5
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.0e-40 170.6 125 68.8
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.6e-40 167.9 129 69.0
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 1.2e-36 157.1 125 64.0
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 1.7e-35 153.3 125 60.8
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 6.4e-35 151.4 124 60.5
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 6.4e-35 151.4 129 56.6
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 4.6e-33 145.2 125 57.6
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 4.6e-33 145.2 126 60.3
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 6.0e-33 144.8 125 58.4
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.0e-32 142.5 91 79.1
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 1.4e-29 133.7 124 50.8
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 5.1e-24 115.2 79 78.5
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 6.2e-22 108.2 126 50.0
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 6.0e-17 91.7 142 38.0
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 1.9e-15 86.7 125 38.4
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 1.1e-13 80.9 111 46.8
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 9.9e-12 74.3 121 32.2


User provided reference genes

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