Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 9.0e-142 506.9 257 100.0
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 8.6e-76 287.7 297 58.6
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 1.2e-66 257.3 285 54.0
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 2.5e-59 233.0 295 47.8
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 6.2e-50 201.8 270 48.9
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 5.6e-43 178.7 246 45.9
HanXRQChr12g0366691 Helianthus annuus HOM05D003173 ORTHO05D003546 2.9e-39 166.4 254 42.1
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 2.8e-34 149.8 271 42.1
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 6.3e-34 148.7 260 39.6
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.4e-33 146.7 268 37.7
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.3e-33 145.6 261 39.5
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.6e-32 143.3 268 41.4
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 5.9e-32 142.1 271 41.3
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 1.0e-31 141.4 271 38.4
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 2.9e-31 139.8 258 39.1
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 8.5e-31 138.3 281 38.8
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 1.1e-30 137.9 277 36.5
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 1.2e-29 134.4 259 38.6
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 1.6e-29 134.0 283 36.4
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.1e-29 133.7 270 38.5
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.6e-29 132.9 264 38.3
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 4.6e-29 132.5 272 38.6
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 4.6e-29 132.5 267 38.2
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.1e-29 132.1 275 37.8
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 7.9e-29 131.7 263 36.9
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.3e-28 131.0 275 36.7
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 2.3e-28 130.2 259 38.2
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.3e-28 130.2 258 35.7
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.0e-28 129.8 259 38.2
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 3.9e-28 129.4 278 38.8
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.7e-28 128.6 262 36.3
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 6.7e-28 128.6 268 34.7
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 1.1e-27 127.9 257 38.9
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 1.9e-27 127.1 295 33.6
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.5e-27 126.7 271 36.2
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 2.5e-27 126.7 265 40.0
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.3e-27 126.3 280 39.6
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 9.7e-27 124.8 278 37.1
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 1.3e-26 124.4 271 36.2
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.3e-26 124.4 267 35.2
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.8e-26 123.2 275 36.4
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 1.8e-25 120.6 276 37.7
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.8e-25 120.6 278 35.6
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.8e-25 120.6 251 34.7
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.8e-25 120.6 273 33.7
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 2.4e-25 120.2 253 39.5
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.1e-25 119.8 277 35.0
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 3.1e-25 119.8 275 35.3
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 4.1e-25 119.4 268 36.6
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 4.1e-25 119.4 272 36.4
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 4.1e-25 119.4 267 37.8
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 4.1e-25 119.4 254 37.8
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 5.3e-25 119.0 260 35.0
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 6.9e-25 118.6 279 35.1
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 1.5e-24 117.5 273 36.3
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 2.0e-24 117.1 281 31.7
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.0e-24 117.1 279 36.6
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 2.6e-24 116.7 295 35.6
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.6e-24 116.7 258 36.4
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 4.5e-24 115.9 292 35.6
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 7.7e-24 115.2 271 34.3
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 7.7e-24 115.2 297 33.3
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 7.7e-24 115.2 270 34.8
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.0e-23 114.8 268 33.2
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 1.7e-23 114.0 246 35.4
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 2.2e-23 113.6 268 35.1
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.9e-23 113.2 278 34.9
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 3.8e-23 112.8 268 33.6
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 8.5e-23 111.7 257 37.4
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 1.9e-22 110.5 292 34.6
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 2.5e-22 110.2 267 35.6
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 2.5e-22 110.2 262 33.2
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 5.5e-22 109.0 290 33.1
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 5.5e-22 109.0 221 37.1
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.2e-22 108.6 291 33.3
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 9.4e-22 108.2 280 33.2
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.6e-21 107.5 279 35.5
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 2.1e-21 107.1 290 32.8
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 2.1e-21 107.1 268 35.1
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 2.7e-21 106.7 260 34.6
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 2.7e-21 106.7 276 33.0
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.7e-21 106.7 281 35.6
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 2.7e-21 106.7 281 33.8
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 3.6e-21 106.3 264 34.1
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 4.6e-21 105.9 284 33.1
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 4.6e-21 105.9 279 34.4
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 4.6e-21 105.9 276 36.6
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 6.1e-21 105.5 268 33.2
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.0e-20 104.8 278 32.7
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 1.8e-20 104.0 253 32.4
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.3e-20 103.6 273 33.3
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.0e-20 103.2 291 32.6
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 3.9e-20 102.8 263 35.4
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 5.1e-20 102.4 253 32.4
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 2.0e-19 100.5 272 33.5
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.0e-19 100.5 291 32.3
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 2.6e-19 100.1 305 32.5
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.6e-19 100.1 260 31.5
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 4.4e-19 99.4 281 33.1
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 9.7e-19 98.2 245 32.7
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 1.3e-18 97.8 257 32.3
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 1.3e-18 97.8 281 32.7
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 1.7e-18 97.4 274 31.4
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 1.7e-18 97.4 280 32.9
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 2.2e-18 97.1 291 32.6
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 3.7e-18 96.3 252 32.9
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 8.2e-18 95.1 273 31.9
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 1.1e-17 94.7 284 31.0
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 6.9e-17 92.0 229 35.4
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 6.9e-17 92.0 243 32.1
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 1.2e-16 91.3 206 32.5
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 2.0e-16 90.5 280 31.4
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 4.5e-16 89.4 282 28.4
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 4.5e-16 89.4 209 32.5
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 7.7e-16 88.6 275 29.1
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 7.7e-16 88.6 282 31.2
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 1.3e-15 87.8 282 29.4
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 1.7e-15 87.4 271 28.4
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.2e-15 87.0 273 31.5
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 2.2e-15 87.0 284 28.5
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 2.9e-15 86.7 234 30.3
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 2.9e-15 86.7 234 30.3
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 3.8e-15 86.3 246 31.7
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 3.8e-15 86.3 271 28.4
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 3.8e-15 86.3 232 30.2
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 3.8e-15 86.3 266 31.2
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 5.0e-15 85.9 234 31.2
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 6.5e-15 85.5 260 30.8
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 8.5e-15 85.1 274 29.2
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 8.5e-15 85.1 258 29.8
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 4.2e-14 82.8 276 30.1
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 9.4e-14 81.6 258 29.8
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 1.6e-13 80.9 273 31.1
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 2.7e-13 80.1 268 29.5
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 3.6e-13 79.7 234 30.3
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 3.6e-13 79.7 234 30.3
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 4.7e-13 79.3 246 30.5
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 4.7e-13 79.3 275 28.7
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 4.7e-13 79.3 273 30.8
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 6.1e-13 79.0 228 32.0
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-12 78.2 273 26.7
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 1.0e-12 78.2 273 26.7
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.8e-12 77.4 266 28.9
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.8e-12 77.4 199 32.7
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 1.8e-12 77.4 289 30.4
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 2.3e-12 77.0 269 30.1
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 2.3e-12 77.0 276 29.3
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 2.3e-12 77.0 259 26.6
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 3.0e-12 76.6 268 29.9
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 3.0e-12 76.6 271 29.9
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 3.9e-12 76.3 266 29.3
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 3.9e-12 76.3 183 36.1
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 6.7e-12 75.5 240 30.0
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 8.8e-12 75.1 274 27.4
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 8.8e-12 75.1 266 28.9
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 8.8e-12 75.1 273 26.7
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 2.6e-11 73.6 231 29.9
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 2.6e-11 73.6 239 31.0
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.3e-11 73.2 249 29.7
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 4.4e-11 72.8 204 30.9
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 4.4e-11 72.8 265 28.7
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 7.4e-11 72.0 237 29.5
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 1.3e-10 71.2 232 28.4
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 3.7e-10 69.7 237 29.1
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 4.8e-10 69.3 221 27.6
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 4.8e-10 69.3 122 35.2
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 4.8e-10 69.3 203 31.5
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 4.8e-10 69.3 216 31.5
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 4.8e-10 69.3 255 28.2
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 4.1e-09 66.2 142 31.0
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 4.1e-09 66.2 197 33.0
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.2e-08 64.7 238 29.0
BcaB05g24968 Brassica carinata HOM05D003173 ORTHO05D003546 2.6e-08 63.5 214 28.5
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 7.7e-08 62.0 114 36.0
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 1.0e-07 61.6 234 30.8
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 2.2e-07 60.5 165 34.5
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 2.2e-07 60.5 174 32.8
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.9e-07 60.1 236 27.1
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 5.0e-07 59.3 185 33.0
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 2.5e-06 57.0 218 28.9
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 4.2e-06 56.2 181 30.4
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 4.2e-06 56.2 181 33.7
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 4.2e-06 56.2 182 34.1
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 5.5e-06 55.8 226 29.6
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 7.2e-06 55.5 197 35.0
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 7.2e-06 55.5 241 25.7


User provided reference genes

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