Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.9e-72 275.8 147 100.0
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.3e-55 219.9 158 77.2
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 9.1e-54 213.8 159 74.8
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.7e-47 193.0 143 74.1
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.7e-47 193.0 153 69.9
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.1e-46 190.3 146 70.5
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.4e-46 189.9 156 69.2
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.4e-46 189.9 156 69.2
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.4e-46 189.9 141 71.6
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.8e-46 189.5 155 70.3
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.8e-46 189.5 155 70.3
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.4e-46 189.1 148 69.6
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 3.1e-46 188.7 147 69.4
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 4.1e-46 188.3 153 68.0
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.2e-45 186.8 141 70.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.0e-45 186.0 141 73.8
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 7.7e-45 184.1 139 69.8
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.2e-44 182.6 148 68.2
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 3.8e-44 181.8 147 67.3
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 5.0e-44 181.4 138 66.7
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 6.5e-44 181.0 146 67.1
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 6.5e-44 181.0 148 68.2
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 6.5e-44 181.0 148 68.2
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 8.5e-44 180.6 148 67.6
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.9e-43 179.5 148 64.9
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 4.2e-43 178.3 159 64.2
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 4.2e-43 178.3 150 69.3
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 5.5e-43 177.9 148 67.6
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 7.2e-43 177.6 148 66.2
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 9.4e-43 177.2 154 64.9
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 1.2e-42 176.8 154 64.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.6e-42 176.4 174 57.5
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.1e-42 176.0 153 64.1
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 2.1e-42 176.0 148 65.5
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 2.7e-42 175.6 146 67.1
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 2.7e-42 175.6 143 67.1
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.7e-42 175.6 153 66.0
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 8.0e-42 174.1 135 68.9
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 8.0e-42 174.1 152 64.5
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.0e-41 173.7 153 62.7
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.8e-41 172.9 147 65.3
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.8e-41 172.9 132 72.0
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 3.0e-41 172.2 157 64.3
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 6.7e-41 171.0 148 62.8
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 2.6e-40 169.1 157 61.1
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 5.7e-40 167.9 133 71.4
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 5.7e-40 167.9 164 59.8
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.3e-39 166.8 150 62.7
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 2.2e-39 166.0 138 65.2
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 2.8e-39 165.6 146 65.1
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 3.7e-39 165.2 95 87.4
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 4.8e-39 164.9 141 63.8
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 4.8e-39 164.9 156 61.5
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 8.2e-39 164.1 162 60.5
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.1e-38 163.7 143 63.6
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 1.4e-38 163.3 150 62.7
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.8e-38 162.9 140 64.3
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.4e-38 162.5 152 61.8
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.6e-37 159.8 159 59.1
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.6e-37 159.8 132 64.4
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 2.0e-37 159.5 149 63.1
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.6e-37 159.1 159 59.7
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.5e-37 158.7 150 62.0
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.5e-37 158.3 160 59.4
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 7.7e-37 157.5 160 58.1
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 7.7e-37 157.5 154 63.0
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 7.7e-37 157.5 136 61.8
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.0e-36 157.1 154 63.0
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.3e-36 156.8 165 57.0
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 1.3e-36 156.8 166 56.0
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.7e-36 156.4 138 60.9
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.7e-36 156.4 159 57.9
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 1.7e-36 156.4 157 59.2
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 6.5e-36 154.5 150 59.3
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 8.5e-36 154.1 166 56.0
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 8.5e-36 154.1 161 57.1
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.1e-35 153.7 102 73.5
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.1e-35 153.7 150 60.7
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.9e-35 152.9 143 60.1
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 4.2e-35 151.8 170 58.2
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 7.2e-35 151.0 151 57.0
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.6e-34 149.8 159 55.3
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 8.0e-34 147.5 138 59.4
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 8.0e-34 147.5 151 58.9
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 4.0e-33 145.2 138 56.5
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.5e-32 143.3 138 58.7
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 3.3e-32 142.1 139 56.8
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.4e-32 141.7 140 58.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.4e-32 141.7 140 58.6
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 7.5e-32 141.0 94 76.6
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 9.7e-32 140.6 140 58.6
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 9.7e-32 140.6 140 58.6
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 2.4e-30 136.0 149 51.7
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 2.0e-29 132.9 145 56.6
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 4.5e-29 131.7 136 57.4
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 3.2e-27 125.6 139 54.7
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 4.2e-27 125.2 182 45.6
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 5.5e-27 124.8 162 49.4
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.2e-26 123.6 179 44.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 4.7e-26 121.7 135 55.6
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 8.0e-26 120.9 145 49.0
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 8.0e-26 120.9 83 73.5
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.8e-25 119.8 148 48.6
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.3e-25 119.4 105 63.8
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 5.7e-24 114.8 131 54.2
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 2.4e-22 109.4 82 68.3
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 3.5e-21 105.5 142 46.5
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.5e-21 105.5 144 47.2
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.5e-21 105.1 144 45.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 4.5e-21 105.1 141 50.4
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.9e-21 104.8 142 46.5
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.7e-21 104.4 145 46.2
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.0e-20 104.0 97 60.8
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.7e-20 103.2 130 46.2
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.3e-20 102.8 98 58.2
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 7.2e-19 97.8 101 56.4
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 3.0e-17 92.4 113 46.9
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 7.5e-16 87.8 132 44.7
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 9.8e-16 87.4 59 78.0
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 1.3e-15 87.0 120 42.5
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.7e-15 85.5 102 51.0
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 5.9e-13 78.2 102 49.0
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.6e-10 70.1 132 39.4
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 8.3e-07 57.8 104 44.2
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 7.0e-06 54.7 68 51.5


User provided reference genes

Program Settings