Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 4.5e-143 511.1 241 100.0
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.5e-143 511.1 241 100.0
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.2e-114 416.8 241 80.1
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 8.0e-108 394.0 241 71.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.1e-96 357.1 237 66.7
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 3.9e-94 348.6 237 64.6
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 6.6e-94 347.8 237 64.6
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.5e-93 346.7 237 64.6
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 2.5e-93 345.9 236 64.4
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 9.5e-93 344.0 236 64.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.2e-92 343.6 237 63.7
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.1e-92 342.8 236 63.6
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.8e-92 342.4 237 65.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.7e-92 341.7 236 63.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 8.1e-92 340.9 237 64.1
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-91 340.5 237 65.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.8e-91 339.7 236 66.9
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.8e-91 339.7 237 64.6
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 2.3e-91 339.3 236 62.7
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 3.1e-91 339.0 238 63.4
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 3.1e-91 339.0 237 63.7
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 4.0e-91 338.6 237 64.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 5.2e-91 338.2 236 63.1
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 6.8e-91 337.8 236 63.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.8e-91 337.8 237 62.9
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.2e-90 337.0 236 63.1
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.5e-90 336.7 236 63.1
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.4e-90 335.1 237 61.2
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 5.8e-90 334.7 238 64.7
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 2.2e-89 332.8 237 63.3
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.2e-89 332.8 237 61.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.9e-89 332.4 237 62.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.9e-89 332.4 237 62.0
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.9e-89 332.4 236 61.4
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.9e-89 332.4 237 61.2
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.7e-89 332.0 236 63.1
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.7e-89 332.0 236 63.1
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.7e-89 332.0 236 63.1
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.7e-89 332.0 237 63.3
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.9e-89 331.6 237 61.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 4.9e-89 331.6 236 61.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 4.9e-89 331.6 237 60.8
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 4.9e-89 331.6 237 61.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 6.4e-89 331.3 236 62.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.3e-89 330.9 236 62.3
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 8.3e-89 330.9 237 60.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 8.3e-89 330.9 237 61.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.1e-88 330.5 238 61.3
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.4e-88 330.1 236 62.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.9e-88 329.7 236 63.6
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.2e-88 328.9 237 62.9
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 3.2e-88 328.9 236 61.0
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.1e-88 328.6 236 61.4
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.1e-88 328.6 236 62.7
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 4.1e-88 328.6 237 63.7
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 7.1e-88 327.8 236 61.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 9.2e-88 327.4 237 60.8
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 2.1e-87 326.2 236 60.2
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.7e-87 325.9 236 60.6
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 4.6e-87 325.1 239 59.4
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.0e-87 324.7 237 59.9
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 6.0e-87 324.7 236 61.0
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 7.8e-87 324.3 236 59.7
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.3e-86 323.6 237 59.5
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.7e-86 323.2 236 60.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.3e-86 322.8 237 59.1
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 5.1e-86 321.6 236 60.2
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 6.6e-86 321.2 236 60.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.6e-86 321.2 236 60.6
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 6.6e-86 321.2 237 59.9
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.1e-85 320.5 236 60.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-85 320.5 237 59.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.5e-85 320.1 237 61.6
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.5e-85 320.1 237 59.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.9e-85 319.7 238 60.1
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-85 319.7 237 59.5
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.5e-85 319.3 237 60.8
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.5e-85 319.3 236 59.7
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.3e-85 318.9 237 61.6
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.3e-85 318.9 237 61.6
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.3e-85 318.9 237 59.9
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 3.3e-85 318.9 236 58.9
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 3.3e-85 318.9 236 58.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 4.3e-85 318.5 236 59.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.3e-85 318.5 237 57.8
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-85 318.5 236 59.3
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 4.3e-85 318.5 236 60.2
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 5.6e-85 318.2 237 58.2
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 7.3e-85 317.8 237 61.6
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 7.3e-85 317.8 237 59.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 9.5e-85 317.4 237 60.8
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 9.5e-85 317.4 237 60.8
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 9.5e-85 317.4 237 60.8
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.2e-84 317.0 237 59.1
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.2e-84 317.0 237 59.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-84 317.0 237 59.1
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.1e-84 316.2 237 58.2
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 2.8e-84 315.8 237 58.6
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 3.6e-84 315.5 238 58.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 4.7e-84 315.1 236 58.9
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.7e-84 315.1 237 58.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 4.7e-84 315.1 237 59.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 4.7e-84 315.1 247 59.1
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.2e-84 314.7 236 58.9
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 8.1e-84 314.3 237 58.6
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.3e-83 312.8 236 58.5
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.1e-83 312.4 236 58.5
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.2e-82 310.5 237 58.6
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.0e-82 309.7 236 57.6
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.6e-82 309.3 237 59.9
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 3.4e-82 308.9 237 56.5
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 4.4e-82 308.5 237 55.7
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 7.6e-82 307.8 237 59.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 4.9e-81 305.1 203 66.5
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 6.4e-81 304.7 237 55.3
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.4e-80 302.8 238 56.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 9.2e-80 300.8 237 56.5
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.1e-79 299.7 237 56.1
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 6.0e-79 298.1 238 56.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.7e-78 296.6 237 56.1
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.7e-78 296.6 236 54.7
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 3.0e-78 295.8 236 53.8
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 3.9e-78 295.4 237 57.0
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 5.1e-78 295.0 237 57.0
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.1e-77 293.9 237 54.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.6e-76 290.0 237 54.0
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.6e-76 290.0 236 54.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.6e-76 290.0 237 54.9
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 2.8e-76 289.3 237 55.7
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-76 288.5 237 53.6
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-75 287.3 237 54.4
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.8e-75 284.6 237 54.0
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-75 284.3 236 55.5
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-74 283.9 237 52.7
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-74 281.6 237 53.2
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.2e-73 279.6 236 52.1
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.2e-73 279.6 237 53.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-73 278.5 237 53.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-73 278.5 238 52.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-73 278.5 236 54.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-73 278.5 237 54.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.2e-71 273.9 212 60.4
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-71 273.1 236 53.0
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.1e-68 263.1 238 50.0
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.6e-66 256.1 238 47.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.6e-66 256.1 237 49.8
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.6e-66 256.1 237 49.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-63 246.9 237 47.3
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.1e-62 241.9 187 57.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.3e-60 237.3 237 47.3
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.1e-60 236.5 236 45.8
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-60 235.0 236 46.2
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-60 235.0 236 45.3
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 6.9e-59 231.5 240 44.6
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.0e-59 231.1 237 46.0
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.2e-58 230.7 238 46.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.4e-58 229.2 239 44.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.3e-57 227.3 244 45.9
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.3e-57 227.3 242 47.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 6.4e-57 224.9 240 47.5
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.1e-51 206.1 245 40.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-50 203.8 238 43.3
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.2e-48 195.7 271 40.6
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-47 193.0 243 38.7
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-47 193.0 241 36.5
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-45 187.6 240 38.3
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.9e-43 178.3 190 44.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-40 170.6 241 34.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.1e-35 152.5 239 33.9
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 6.9e-35 151.8 146 51.4
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 7.9e-31 138.3 91 69.2
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 4.7e-23 112.5 90 60.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.3e-20 104.4 83 50.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.2e-20 103.6 120 39.2
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.3e-17 94.4 80 50.0
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.8e-17 92.8 121 34.7
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.5e-17 91.7 100 40.0


User provided reference genes

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