Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 5.5e-110 401.4 263 100.0
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 2.1e-53 213.4 298 56.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 9.5e-46 188.0 208 70.7
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.2e-35 154.5 214 55.6
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.7e-34 150.6 258 46.1
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 2.2e-34 150.2 242 53.7
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 8.7e-31 138.3 220 47.7
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 2.5e-30 136.7 215 47.0
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 4.3e-30 136.0 277 43.0
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 7.3e-30 135.2 301 39.2
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 1.6e-29 134.0 220 46.8
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 4.7e-29 132.5 161 56.5
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 8.1e-29 131.7 280 41.4
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.4e-28 131.0 196 48.5
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.4e-28 131.0 240 45.0
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.8e-28 130.6 170 54.7
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.1e-28 129.8 196 48.0
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 3.1e-28 129.8 291 41.9
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 4.0e-28 129.4 225 44.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 6.9e-28 128.6 196 48.0
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 9.0e-28 128.3 159 55.3
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 9.0e-28 128.3 198 49.0
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 1.2e-27 127.9 161 57.1
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.5e-27 127.5 221 50.7
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.0e-27 127.1 162 56.8
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.4e-27 126.3 218 46.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 3.4e-27 126.3 103 72.8
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.4e-27 126.3 198 47.0
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 4.4e-27 125.9 137 59.9
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 4.4e-27 125.9 154 56.5
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 4.4e-27 125.9 269 43.5
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.4e-27 125.9 231 45.9
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.8e-27 125.6 198 47.0
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 7.6e-27 125.2 240 41.7
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 1.3e-26 124.4 206 47.6
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.7e-26 124.0 218 45.9
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 2.2e-26 123.6 295 38.3
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 2.9e-26 123.2 253 39.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 4.9e-26 122.5 244 43.0
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 8.4e-26 121.7 167 52.1
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.9e-25 120.6 243 43.6
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.4e-25 120.2 243 43.2
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 3.2e-25 119.8 160 53.1
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 9.3e-25 118.2 316 40.5
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.6e-24 117.5 161 50.9
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.1e-24 117.1 212 43.9
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.1e-24 117.1 215 43.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 2.1e-24 117.1 203 46.3
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 3.5e-24 116.3 208 42.3
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 6.0e-24 115.5 160 50.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 6.0e-24 115.5 154 52.6
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.0e-23 114.8 153 51.0
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.0e-23 114.8 157 51.6
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.0e-23 114.8 223 48.0
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 2.3e-23 113.6 223 48.9
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 3.9e-23 112.8 217 50.7
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 6.6e-23 112.1 181 45.9
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 8.7e-23 111.7 217 51.2
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.1e-22 111.3 156 50.6
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 1.1e-22 111.3 158 51.3
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.1e-22 111.3 199 48.7
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 1.5e-22 110.9 162 48.1
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 1.5e-22 110.9 95 70.5
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.9e-22 110.5 176 48.9
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 2.5e-22 110.2 158 48.7
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 4.3e-22 109.4 197 44.7
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.6e-22 109.0 161 48.4
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 5.6e-22 109.0 144 54.2
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 5.6e-22 109.0 97 67.0
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 7.3e-22 108.6 158 49.4
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 9.6e-22 108.2 158 49.4
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.3e-21 107.8 163 48.5
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-21 107.8 163 48.5
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.6e-21 107.5 154 49.4
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 6.2e-21 105.5 93 66.7
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 6.2e-21 105.5 141 50.4
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 8.1e-21 105.1 92 69.6
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 8.1e-21 105.1 80 75.0
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.1e-20 104.8 146 47.9
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.1e-20 104.8 159 46.5
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 1.1e-20 104.8 218 45.0
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.4e-20 104.4 93 65.6
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.4e-20 104.4 93 65.6
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.4e-20 104.4 93 65.6
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.4e-20 104.4 158 48.7
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.8e-20 104.0 153 49.7
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 3.1e-20 103.2 161 49.1
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 3.1e-20 103.2 282 36.5
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 3.1e-20 103.2 282 36.5
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 3.1e-20 103.2 157 45.9
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.1e-20 103.2 158 48.7
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 3.1e-20 103.2 215 44.7
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 4.0e-20 102.8 121 52.9
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.0e-20 102.8 213 40.8
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.3e-20 102.4 165 49.1
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.2e-19 101.3 212 47.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.2e-19 101.3 89 64.0
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 3.4e-19 99.8 149 46.3
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 4.5e-19 99.4 118 53.4
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.3e-18 97.8 111 58.6
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.3e-18 97.8 132 49.2
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.9e-18 96.7 110 59.1
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 6.4e-18 95.5 103 61.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 8.4e-18 95.1 85 67.1
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.4e-17 93.6 243 35.0
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 2.4e-17 93.6 80 68.8
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 3.2e-17 93.2 169 41.4
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 7.1e-17 92.0 122 54.1
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 7.1e-17 92.0 143 53.8
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 1.2e-16 91.3 134 51.5
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.5e-16 89.7 110 51.8
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 3.9e-15 86.3 97 55.7
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.3e-14 82.8 63 69.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 7.4e-14 82.0 104 50.0
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 2.0e-11 73.9 76 57.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.2e-10 70.5 46 78.3
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.2e-10 70.5 46 78.3
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 7.1e-09 65.5 147 44.2
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 9.3e-09 65.1 89 53.9
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.7e-08 63.5 60 63.3
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.3e-07 60.5 43 76.7


User provided reference genes

Program Settings