Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 3.9e-265 917.5 450 100.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 4.8e-207 724.5 428 84.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.1e-203 713.4 453 77.9
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 2.7e-189 665.6 430 75.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 6.0e-181 637.9 428 70.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.0e-180 637.1 430 71.4
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.7e-180 636.3 431 69.1
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.3e-179 632.1 434 69.6
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 8.0e-178 627.5 446 67.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.4e-177 626.7 431 70.3
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.8e-177 626.3 432 69.4
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 4.0e-177 625.2 441 67.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 8.9e-177 624.0 450 66.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.5e-176 623.2 434 68.9
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.5e-176 623.2 428 69.2
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.0e-176 622.9 433 67.9
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 7.5e-176 620.9 448 66.1
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.3e-175 620.2 444 67.3
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 1.7e-175 619.8 432 68.8
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 6.4e-175 617.8 409 70.9
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.9e-174 616.3 437 67.0
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 5.4e-174 614.8 428 68.7
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 9.2e-174 614.0 401 72.1
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 2.1e-173 612.8 448 65.8
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.5e-173 612.1 453 66.4
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 4.6e-173 611.7 404 71.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 6.0e-173 611.3 427 66.5
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.8e-173 610.9 433 67.9
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.7e-172 609.8 441 66.7
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 5.0e-172 608.2 432 67.8
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.5e-171 605.9 440 66.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.3e-171 605.5 429 67.1
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 3.3e-171 605.5 448 65.2
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 5.6e-171 604.7 434 67.7
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.2e-170 601.3 426 67.8
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-169 600.5 439 65.4
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.4e-169 600.1 431 66.4
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.8e-169 599.7 440 65.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 4.0e-169 598.6 450 63.1
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 5.2e-169 598.2 426 67.6
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 6.8e-169 597.8 404 68.1
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 6.8e-169 597.8 441 63.0
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 8.9e-169 597.4 422 65.9
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.2e-168 597.0 420 65.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.5e-168 596.7 407 69.8
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.6e-168 595.9 446 64.8
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.8e-168 594.7 407 69.3
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 7.5e-168 594.3 444 65.5
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.2e-167 592.8 429 65.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.9e-167 592.4 447 63.3
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.7e-167 592.0 452 63.1
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.4e-166 590.1 431 67.3
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.4e-166 588.2 453 62.5
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 7.1e-166 587.8 445 64.0
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.3e-164 583.6 428 65.0
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.7e-164 583.2 449 62.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 5.1e-164 581.6 445 63.4
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 9.5e-163 577.4 444 64.2
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 4.0e-161 572.0 408 64.7
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.5e-160 570.1 408 64.5
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 7.6e-160 567.8 447 62.4
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 7.6e-160 567.8 457 60.8
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.7e-159 566.6 434 62.9
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.2e-157 560.5 440 61.1
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.6e-157 560.1 382 68.3
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.5e-155 552.7 463 60.5
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 4.3e-155 552.0 433 61.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.2e-154 550.4 456 58.8
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 3.1e-153 545.8 433 63.5
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.3e-153 545.0 399 66.4
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-151 540.4 432 63.0
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.1e-150 537.3 427 61.4
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.4e-150 535.0 426 62.7
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.2e-149 533.9 432 61.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.9e-145 518.1 396 62.6
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 3.2e-142 509.2 455 58.7
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.8e-138 496.1 333 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.4e-137 493.0 447 54.8
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.4e-137 493.0 426 59.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 9.0e-137 491.1 433 58.9
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.7e-135 486.9 401 60.1
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.4e-134 483.8 424 54.2
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.9e-134 483.4 415 59.3
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 4.2e-134 482.3 357 67.5
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.5e-131 473.0 450 54.2
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.6e-131 471.1 405 59.3
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.1e-129 466.1 339 65.5
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.9e-129 464.9 413 58.1
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 5.8e-128 461.8 336 67.9
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 9.3e-126 454.5 336 65.5
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 9.3e-126 454.5 440 51.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 6.3e-122 441.8 353 61.2
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.0e-115 420.2 411 48.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.5e-103 378.6 232 75.4
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.6e-93 346.3 238 69.3
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.2e-80 304.7 241 63.1
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.6e-72 277.7 199 65.3
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.3e-66 258.1 245 55.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 5.2e-60 236.1 383 37.6
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.6e-54 216.1 130 79.2
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.6e-54 216.1 130 79.2
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.0e-47 195.3 161 62.1
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 3.3e-46 190.3 161 57.8
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 9.9e-43 178.7 350 33.7
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 3.9e-31 140.2 136 54.4
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.5e-30 137.5 143 51.0
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.5e-30 137.5 143 51.0
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 4.3e-30 136.7 86 74.4
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.9e-22 111.3 123 52.8
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 3.1e-20 104.0 63 73.0
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 3.4e-19 100.5 77 63.6
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 9.3e-17 92.4 207 31.4
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.1e-14 85.5 202 29.7
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 5.7e-14 83.2 199 29.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.7e-10 71.6 75 45.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.1e-09 68.9 389 20.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 8.7e-07 59.3 77 39.0


User provided reference genes

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