Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 5.1e-197 691.0 390 100.0
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 3.8e-123 445.7 334 68.3
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 1.6e-118 430.3 393 60.6
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 1.3e-104 384.0 334 61.1
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 3.1e-101 372.9 389 53.2
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 7.6e-100 368.2 332 57.8
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.5e-98 363.2 332 58.7
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 2.5e-98 363.2 331 58.3
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 9.3e-98 361.3 338 58.0
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 1.6e-97 360.5 336 58.3
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 7.9e-97 358.2 397 50.1
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 1.5e-95 354.0 323 58.2
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.5e-95 354.0 327 56.6
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 2.5e-95 353.2 327 58.4
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 4.3e-95 352.4 388 49.7
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 2.8e-94 349.7 327 56.0
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 3.7e-94 349.4 327 57.8
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 8.2e-94 348.2 329 56.5
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 6.9e-93 345.1 327 56.0
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 6.9e-93 345.1 280 60.7
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 5.9e-92 342.0 395 49.9
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.6e-92 341.7 321 56.7
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.2e-91 340.1 337 52.8
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 6.5e-91 338.6 337 52.8
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.1e-90 337.8 310 56.1
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 5.5e-90 335.5 326 56.4
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 7.2e-90 335.1 453 44.2
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.2e-89 334.3 329 53.5
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.2e-89 334.3 336 56.2
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.2e-89 334.3 295 58.6
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 2.1e-89 333.6 282 58.9
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.7e-89 333.2 326 52.5
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 6.1e-89 332.0 331 56.2
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 6.1e-89 332.0 345 54.8
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 1.0e-88 331.3 327 54.4
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.0e-88 331.3 329 54.4
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 1.3e-88 330.9 326 52.1
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-88 330.9 320 54.4
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 1.3e-88 330.9 328 53.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.8e-88 330.5 317 53.3
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.8e-88 330.5 295 60.7
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 2.3e-88 330.1 329 52.9
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 3.9e-88 329.3 320 54.1
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.1e-88 328.9 317 53.3
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 5.1e-88 328.9 319 55.2
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 6.7e-88 328.6 320 54.4
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.1e-87 327.8 320 54.1
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.5e-87 327.4 318 55.7
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 7.4e-87 325.1 280 57.9
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 9.7e-87 324.7 334 51.8
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 9.7e-87 324.7 337 52.8
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.2e-86 323.6 318 55.0
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 2.2e-86 323.6 284 57.4
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 2.8e-86 323.2 318 55.3
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 6.3e-86 322.0 306 54.9
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 3.1e-85 319.7 327 51.7
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 4.1e-85 319.3 324 54.6
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 6.9e-85 318.5 329 52.9
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 7.7e-84 315.1 334 53.0
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 2.2e-83 313.5 315 54.6
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 2.9e-83 313.2 288 54.5
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 6.5e-83 312.0 282 55.0
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.5e-82 310.1 248 63.3
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 6.7e-80 302.0 348 50.6
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 3.3e-79 299.7 331 49.5
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 7.4e-79 298.5 303 51.5
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.4e-79 298.5 326 50.6
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.3e-78 295.4 350 47.1
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 6.3e-78 295.4 326 50.3
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 1.4e-77 294.3 337 46.3
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 1.8e-77 293.9 286 52.8
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 3.4e-76 289.7 331 51.7
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 4.5e-76 289.3 276 52.2
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 3.8e-75 286.2 278 52.5
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 1.2e-73 281.2 320 48.1
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 3.6e-73 279.6 298 49.3
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 3.3e-71 273.1 294 48.3
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 7.4e-71 271.9 409 42.8
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 9.7e-71 271.6 339 47.2
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.2e-70 270.4 321 48.3
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 2.8e-70 270.0 343 47.8
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.6e-68 264.2 201 64.2
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 2.6e-68 263.5 316 46.8
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.5e-68 262.7 308 48.4
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.2e-62 241.9 291 48.8
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.0e-59 235.0 407 39.8
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.9e-59 233.4 190 63.2
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 1.4e-56 224.6 337 40.1
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 8.8e-56 221.9 323 42.1
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 2.6e-55 220.3 180 58.3
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 4.4e-55 219.5 223 56.1
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 8.5e-51 205.3 229 50.2
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.5e-50 204.5 505 31.3
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 3.6e-49 199.9 218 49.1
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.2e-48 196.1 171 58.5
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 2.3e-40 170.6 263 38.0
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 2.0e-39 167.5 159 50.9
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 1.7e-38 164.5 173 52.0
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 4.1e-37 159.8 212 42.9
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-32 144.4 103 68.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 4.9e-30 136.3 332 28.9
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.4e-21 108.2 168 33.9
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 7.3e-18 95.9 120 41.7
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.6e-17 94.7 233 28.3
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-17 94.4 106 44.3
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-16 91.3 211 32.2
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 6.8e-16 89.4 104 44.2
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.6e-15 87.4 113 45.1
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 3.5e-12 77.0 229 27.1
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.6e-12 76.6 330 25.8
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.9e-11 73.6 46 69.6
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 1.9e-10 71.2 150 36.7
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.8e-09 67.4 59 50.8
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 6.2e-09 66.2 37 75.7
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 1.5e-07 61.6 45 66.7
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.0e-07 61.2 46 60.9
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 5.8e-07 59.7 73 39.7
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 5.8e-07 59.7 78 38.5


User provided reference genes

Program Settings