Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0421151 Helianthus annuus HOM05D002562 ORTHO05D002808 4.7e-117 424.5 203 100.0
HanXRQChr07g0185741 Helianthus annuus HOM05D002562 ORTHO05D002808 2.0e-112 409.1 203 96.1
HanXRQChr17g0533491 Helianthus annuus HOM05D002562 ORTHO05D002808 1.3e-111 406.4 203 95.6
HanXRQChr03g0083941 Helianthus annuus HOM05D002562 ORTHO05D002808 7.0e-105 384.0 203 88.2
HanXRQChr03g0091841 Helianthus annuus HOM05D002562 ORTHO05D002808 9.1e-105 383.6 203 88.2
HanXRQChr04g0094151 Helianthus annuus HOM05D002562 ORTHO05D002808 2.7e-104 382.1 203 88.2
HanXRQChr11g0324781 Helianthus annuus HOM05D002562 ORTHO05D002808 2.7e-104 382.1 203 90.6
HanXRQChr14g0457391 Helianthus annuus HOM05D002562 ORTHO05D002808 1.0e-100 370.2 203 86.2
HanXRQChr13g0407461 Helianthus annuus HOM05D002562 ORTHO05D002808 4.5e-96 354.8 203 80.8
HanXRQChr10g0314271 Helianthus annuus HOM05D002562 ORTHO05D002808 1.8e-92 342.8 175 89.7
HanXRQChr07g0197051 Helianthus annuus HOM05D002562 ORTHO05D002808 2.7e-88 328.9 203 73.9
HanXRQChr13g0413011 Helianthus annuus HOM05D002562 ORTHO05D002808 7.8e-88 327.4 203 73.4
HanXRQChr08g0231991 Helianthus annuus HOM05D002562 ORTHO05D002808 6.6e-87 324.3 203 71.9
HanXRQChr17g0561941 Helianthus annuus HOM05D002562 ORTHO05D002808 1.2e-85 320.1 203 70.9
HanXRQChr05g0160491 Helianthus annuus HOM05D002562 ORTHO05D002808 3.4e-83 312.0 203 71.9
HanXRQChr16g0519991 Helianthus annuus HOM05D002562 ORTHO05D002808 3.4e-83 312.0 202 71.8
HanXRQChr09g0277311 Helianthus annuus HOM05D002562 ORTHO05D002808 9.8e-83 310.5 200 69.5
HanXRQChr17g0548421 Helianthus annuus HOM05D002562 ORTHO05D002808 2.4e-81 305.8 199 69.3
HanXRQChr15g0485461 Helianthus annuus HOM05D002562 ORTHO05D002808 4.1e-81 305.1 203 70.4
HanXRQChr08g0212061 Helianthus annuus HOM05D002562 ORTHO05D002808 7.0e-81 304.3 199 68.8
HanXRQChr08g0223641 Helianthus annuus HOM05D002562 ORTHO05D002808 6.0e-80 301.2 200 71.5
HanXRQChr16g0521541 Helianthus annuus HOM05D002562 ORTHO05D002808 7.8e-80 300.8 203 70.0
HanXRQChr08g0235971 Helianthus annuus HOM05D000792 ORTHO05D002808 9.8e-75 283.9 164 75.6
HanXRQChr16g0507471 Helianthus annuus HOM05D002797 ORTHO05D003496 6.4e-74 281.2 162 79.0
Lsat_1_v5_gn_5_100361 Lactuca sativa HOM05D002562 ORTHO05D002808 3.5e-72 275.4 199 64.3
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 6.0e-72 274.6 171 76.0
HanXRQChr06g0180461 Helianthus annuus HOM05D002562 ORTHO05D002808 6.6e-71 271.2 134 98.5
HanXRQChr10g0301871 Helianthus annuus HOM05D002562 ORTHO05D002808 5.6e-70 268.1 141 89.4
HanXRQChr05g0132871 Helianthus annuus HOM05D002562 ORTHO05D002808 7.3e-70 267.7 149 79.2
Lsat_1_v5_gn_4_118581 Lactuca sativa HOM05D001813 ORTHO05D002808 1.4e-68 263.5 199 64.8
Aqoxy5G01906 Aquilegia oxysepala HOM05D002562 ORTHO05D002808 1.2e-67 260.4 197 60.4
HanXRQChr02g0036631 Helianthus annuus HOM05D002562 ORTHO05D002808 1.3e-66 256.9 184 65.2
Lsat_1_v5_gn_2_115761 Lactuca sativa HOM05D002562 ORTHO05D002808 7.1e-65 251.1 195 61.5
Lsat_1_v5_gn_6_98681 Lactuca sativa HOM05D002562 ORTHO05D002808 1.2e-64 250.4 187 61.0
ECA232G0400 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.6e-64 250.0 167 71.9
Medtr7g075890 Medicago truncatula HOM05D000015 ORTHO05D000270 2.1e-64 249.6 177 66.1
HanXRQChr10g0312691 Helianthus annuus HOM05D002562 ORTHO05D002808 4.6e-64 248.4 171 67.3
HanXRQChr08g0208911 Helianthus annuus HOM05D002562 ORTHO05D002808 2.3e-63 246.1 120 95.0
HanXRQChr04g0094871 Helianthus annuus HOM05D002562 ORTHO05D002808 1.5e-59 233.4 171 68.4
HanXRQChr08g0207411 Helianthus annuus HOM05D002562 ORTHO05D002808 1.3e-58 230.3 155 70.3
Lsat_1_v5_gn_3_90660 Lactuca sativa HOM05D002562 ORTHO05D005099 2.2e-58 229.6 145 73.8
Lsat_1_v5_gn_5_149541 Lactuca sativa HOM05D001072 ORTHO05D001945 2.2e-58 229.6 162 66.0
HanXRQChr10g0314701 Helianthus annuus HOM05D002562 ORTHO05D002808 4.6e-56 221.9 138 74.6
ECA238G0050 Erigeron canadensis HOM05D002562 ORTHO05D002808 6.0e-56 221.5 203 55.7
Psat5g162080 Pisum sativum HOM05D002562 ORTHO05D002808 6.0e-56 221.5 187 57.2
Psat0s4462g0040 Pisum sativum HOM05D002562 ORTHO05D002808 3.9e-55 218.8 203 50.2
HanXRQChr13g0415801 Helianthus annuus HOM05D002562 ORTHO05D002808 1.9e-54 216.5 126 77.8
HanXRQChr13g0415811 Helianthus annuus HOM05D002562 ORTHO05D002808 5.6e-54 214.9 126 77.8
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 8.4e-50 201.1 135 68.1
ECA232G1963 Erigeron canadensis HOM05D000006 ORTHO05D002808 1.9e-49 199.9 178 59.6
HanXRQChr07g0193251 Helianthus annuus HOM05D002562 ORTHO05D002808 9.3e-49 197.6 127 72.4
HanXRQChr17g0569251 Helianthus annuus HOM05D002562 ORTHO05D002808 2.1e-48 196.4 106 80.2
ECA236G1569 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.1e-45 186.4 136 68.4
ECA232G3153 Erigeron canadensis HOM05D002643 ORTHO05D003365 9.0e-44 181.0 168 56.5
Medtr5g063210 Medicago truncatula HOM05D002562 ORTHO05D002808 1.3e-42 177.2 200 46.5
Aqoxy7G01571 Aquilegia oxysepala HOM05D002562 ORTHO05D002808 4.9e-42 175.3 136 61.8
HanXRQChr15g0485521 Helianthus annuus HOM05D002562 ORTHO05D002808 6.4e-42 174.9 118 72.9
ECA246G3711 Erigeron canadensis HOM05D002562 ORTHO05D002808 5.5e-41 171.8 190 42.6
HanXRQChr10g0286911 Helianthus annuus HOM05D010611 ORTHO05D011573 2.1e-40 169.9 93 86.0
HanXRQChr13g0406291 Helianthus annuus HOM05D002562 ORTHO05D002808 4.6e-40 168.7 101 77.2
Psat4g021960 Pisum sativum HOM05D002562 ORTHO05D002808 3.9e-39 165.6 148 54.7
ECA248G3732 Erigeron canadensis HOM05D000009 ORTHO05D000008 5.1e-39 165.2 180 45.0
HanXRQChr01g0001561 Helianthus annuus HOM05D002562 ORTHO05D002808 1.1e-38 164.1 89 78.7
ECA232G4599 Erigeron canadensis HOM05D002562 ORTHO05D002808 3.3e-38 162.5 156 52.6
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 3.3e-38 162.5 105 70.5
Psat0s1465g0040 Pisum sativum HOM05D003053 ORTHO05D003431 1.6e-37 160.2 136 54.4
Lsat_1_v5_gn_0_300 Lactuca sativa HOM05D000124 ORTHO05D000056 4.0e-36 155.6 114 63.2
PSO339G3669 Papaver somniferum HOM05D002562 ORTHO05D002808 4.0e-36 155.6 199 37.7
Lsat_1_v5_gn_4_108320 Lactuca sativa HOM05D000087 ORTHO05D000439 9.0e-36 154.5 100 69.0
PSO170G0202 Papaver somniferum HOM05D002562 ORTHO05D002808 1.2e-35 154.1 202 39.6
PSO063G2234 Papaver somniferum HOM05D002562 ORTHO05D002808 7.6e-35 151.4 187 40.1
HanXRQChr14g0449001 Helianthus annuus HOM05D002562 ORTHO05D002808 1.0e-34 151.0 78 83.3
PSO541G0658 Papaver somniferum HOM05D002562 ORTHO05D002808 4.9e-34 148.7 198 36.9
PSO017G1869 Papaver somniferum HOM05D002562 ORTHO05D002808 8.4e-34 147.9 199 40.2
PSO170G4074 Papaver somniferum HOM05D002562 ORTHO05D002808 1.1e-33 147.5 199 38.7
ECA248G3130 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.9e-33 146.7 160 43.8
PSO063G1963 Papaver somniferum HOM05D002562 ORTHO05D002808 4.2e-33 145.6 198 36.9
PSO384G0701 Papaver somniferum HOM05D002562 ORTHO05D002808 1.2e-32 144.1 198 38.4
PSO674G0114 Papaver somniferum HOM05D002562 ORTHO05D002808 3.5e-32 142.5 199 38.7
PSO210G5469 Papaver somniferum HOM05D002562 ORTHO05D002808 6.0e-32 141.7 194 37.1
ECA238G3294 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.8e-31 140.2 96 72.9
PSO063G4084 Papaver somniferum HOM05D002562 ORTHO05D002808 2.3e-31 139.8 193 37.8
PSO339G6447 Papaver somniferum HOM05D002562 ORTHO05D002808 6.7e-31 138.3 198 37.9
HanXRQChr03g0081361 Helianthus annuus HOM05D002562 ORTHO05D002808 9.6e-30 134.4 84 73.8
PSO357G0637 Papaver somniferum HOM05D002562 ORTHO05D002808 3.7e-29 132.5 199 34.2
PSO063G7303 Papaver somniferum HOM05D002562 ORTHO05D002808 6.3e-29 131.7 193 38.3
PSO699G0071 Papaver somniferum HOM05D002562 ORTHO05D002808 8.2e-29 131.3 196 33.7
Medtr3g084080 Medicago truncatula HOM05D002562 ORTHO05D002808 1.1e-28 131.0 117 52.1
PSO017G0536 Papaver somniferum HOM05D002562 ORTHO05D002808 1.4e-28 130.6 163 41.7
PSO339G1254 Papaver somniferum HOM05D002562 ORTHO05D002808 1.4e-28 130.6 180 38.3
PSO675G8472 Papaver somniferum HOM05D000403 ORTHO05D000350 5.3e-28 128.6 180 36.1
ECA248G0296 Erigeron canadensis HOM05D002562 ORTHO05D002808 6.9e-28 128.3 197 36.0
ECA248G1993 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.2e-27 127.5 130 46.2
ECA248G3946 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.2e-27 127.5 130 46.2
HanXRQChr02g0056891 Helianthus annuus HOM05D002562 ORTHO05D002808 7.6e-27 124.8 96 64.6
Lsat_1_v5_gn_0_37780 Lactuca sativa HOM05D001096 ORTHO05D001629 1.3e-26 124.0 109 57.8
PSO339G0455 Papaver somniferum HOM05D002562 ORTHO05D002808 1.7e-26 123.6 166 34.9
PSO675G6249 Papaver somniferum HOM05D002562 ORTHO05D002808 1.7e-26 123.6 172 36.0
ECA240G0082 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.9e-26 122.9 169 36.7
PSO832G3967 Papaver somniferum HOM05D002562 ORTHO05D002808 2.9e-26 122.9 198 36.4
PSO478G5180 Papaver somniferum HOM05D002562 ORTHO05D002808 1.1e-25 120.9 155 39.4
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 1.4e-25 120.6 102 58.8
ECA232G2376 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.5e-25 119.8 166 37.3
PSO478G2223 Papaver somniferum HOM05D002562 ORTHO05D002808 3.2e-25 119.4 161 35.4
PSO478G2592 Papaver somniferum HOM05D004248 ORTHO05D004978 3.2e-25 119.4 163 36.2
PSO675G2157 Papaver somniferum HOM05D002562 ORTHO05D002808 7.2e-25 118.2 167 38.9
Psat7g242080 Pisum sativum HOM05D002562 ORTHO05D002808 1.2e-24 117.5 84 61.9
PSO541G2367 Papaver somniferum HOM05D002562 ORTHO05D002808 2.1e-24 116.7 153 37.9
ECA238G2855 Erigeron canadensis HOM05D005282 ORTHO05D002071 4.6e-24 115.5 125 44.0
Medtr3g096590 Medicago truncatula HOM05D001453 ORTHO05D002808 6.1e-24 115.2 105 58.1
PSO541G2848 Papaver somniferum HOM05D002562 ORTHO05D002808 7.9e-24 114.8 157 37.6
ECA248G0018 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.0e-23 114.4 180 34.4
ECA240G2644 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.3e-23 114.0 185 35.7
Psat6g015160 Pisum sativum HOM05D002562 ORTHO05D002808 2.3e-23 113.2 90 60.0
ECA238G2635 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-23 112.5 75 68.0
PSO063G6264 Papaver somniferum HOM05D002562 ORTHO05D002808 3.3e-22 109.4 122 41.8
PSO063G6862 Papaver somniferum HOM05D002562 ORTHO05D002808 3.3e-22 109.4 126 41.3
PSO478G1613 Papaver somniferum HOM05D002562 ORTHO05D002808 3.3e-22 109.4 160 33.8
PSO541G3824 Papaver somniferum HOM05D002562 ORTHO05D002808 3.3e-22 109.4 144 39.6
PSO384G3079 Papaver somniferum HOM05D002562 ORTHO05D002808 9.7e-22 107.8 130 40.8
PSO339G5158 Papaver somniferum HOM05D002562 ORTHO05D002808 4.8e-21 105.5 153 35.3
ECA246G0967 Erigeron canadensis HOM05D001386 ORTHO05D004014 2.4e-20 103.2 162 32.7
PSO541G4084 Papaver somniferum HOM05D002562 ORTHO05D002808 2.4e-20 103.2 166 33.1
ECA233G2614 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.5e-19 100.5 124 38.7
PSO063G2969 Papaver somniferum HOM05D002562 ORTHO05D002808 7.7e-19 98.2 118 38.1
Psat4g002440 Pisum sativum HOM05D001103 ORTHO05D000954 1.7e-18 97.1 72 62.5
Medtr3g465680 Medicago truncatula HOM05D000127 ORTHO05D007184 5.0e-18 95.5 80 57.5
ECA246G0696 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-17 94.0 172 35.5
ECA234G4569 Erigeron canadensis HOM05D002562 ORTHO05D002808 4.2e-17 92.4 124 36.3
Medtr7g100970 Medicago truncatula HOM05D002562 ORTHO05D002808 7.2e-17 91.7 70 57.1
PSO063G2049 Papaver somniferum HOM05D002562 ORTHO05D002808 4.6e-16 89.0 89 42.7
ECA246G2440 Erigeron canadensis HOM05D002562 ORTHO05D002808 8.8e-15 84.7 117 34.2
Medtr3g086140 Medicago truncatula HOM05D002562 ORTHO05D002808 1.5e-14 84.0 87 48.3
PSO170G2028 Papaver somniferum HOM05D002562 ORTHO05D002808 4.3e-14 82.4 124 36.3
HanXRQChr08g0225981 Helianthus annuus HOM05D002562 ORTHO05D002808 5.7e-14 82.0 40 80.0
Medtr3g099630 Medicago truncatula HOM05D002562 ORTHO05D002808 2.2e-13 80.1 83 48.2
ECA247G1009 Erigeron canadensis HOM05D002562 ORTHO05D002808 3.7e-13 79.3 112 39.3
ECA240G2247 Erigeron canadensis HOM05D000324 ORTHO05D001014 6.3e-13 78.6 147 29.9
PSO063G1491 Papaver somniferum HOM05D002562 ORTHO05D002808 1.4e-12 77.4 85 43.5
Medtr1g084930 Medicago truncatula HOM05D002562 ORTHO05D002808 2.4e-12 76.6 65 52.3
PSO063G5305 Papaver somniferum HOM05D002562 ORTHO05D002808 5.3e-12 75.5 85 42.4
PSO478G2346 Papaver somniferum HOM05D000017 ORTHO05D000013 2.0e-11 73.6 71 46.5
Medtr2g034445 Medicago truncatula HOM05D002562 ORTHO05D002808 2.6e-11 73.2 56 55.4
ECA236G0085 Erigeron canadensis HOM05D002562 ORTHO05D002808 7.7e-11 71.6 80 42.5
PSO339G5951 Papaver somniferum HOM05D002562 ORTHO05D002808 1.0e-10 71.2 60 53.3
PSO135G0146 Papaver somniferum HOM05D000210 ORTHO05D000247 2.9e-10 69.7 64 46.9
Psat5g277320 Pisum sativum HOM05D002562 ORTHO05D002808 2.5e-09 66.6 100 38.0
HanXRQChr14g0460281 Helianthus annuus HOM05D002562 ORTHO05D002808 7.2e-09 65.1 36 66.7
Psat0s948g0240 Pisum sativum HOM05D002562 ORTHO05D002808 3.6e-08 62.8 48 58.3
ECA238G1134 Erigeron canadensis HOM05D001201 ORTHO05D001100 7.9e-08 61.6 38 71.1
Medtr6g090545 Medicago truncatula HOM05D002562 ORTHO05D002808 1.4e-07 60.8 42 57.1
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.3e-07 60.1 73 42.5
Medtr3g015450 Medicago truncatula HOM05D002562 ORTHO05D002808 2.3e-07 60.1 66 45.5
PSO357G0085 Papaver somniferum HOM05D000016 ORTHO05D000725 2.3e-07 60.1 106 32.1
ECA238G2352 Erigeron canadensis HOM05D002562 ORTHO05D002808 5.1e-07 58.9 80 40.0
PSO017G0535 Papaver somniferum HOM05D002562 ORTHO05D002808 6.7e-07 58.5 66 39.4
ECA240G2694 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.5e-06 57.4 67 43.3
Medtr4g127750 Medicago truncatula HOM05D000540 ORTHO05D000681 1.5e-06 57.4 56 50.0
ECA233G0545 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.0e-06 57.0 81 33.3
ECA238G4326 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.0e-06 57.0 90 30.0
ECA246G0199 Erigeron canadensis HOM05D002562 ORTHO05D002808 5.7e-06 55.5 80 31.2
ECA248G0281 Erigeron canadensis HOM05D002562 ORTHO05D002808 7.4e-06 55.1 90 33.3


User provided reference genes

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