Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 6.7e-229 797.0 391 100.0
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.2e-198 696.4 365 90.4
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.4e-194 682.9 368 87.5
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.2e-180 636.7 364 81.3
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.2e-180 636.7 367 79.8
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.2e-180 636.7 363 80.7
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.5e-180 636.3 368 80.4
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 2.0e-180 636.0 367 79.6
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.6e-180 635.6 365 81.4
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.8e-179 632.1 361 80.3
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.1e-178 630.2 363 81.5
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.4e-178 629.8 362 80.9
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.1e-178 628.6 362 79.6
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 3.1e-178 628.6 363 79.3
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 4.1e-178 628.2 364 78.8
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 4.1e-178 628.2 361 80.6
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 5.4e-178 627.9 361 80.3
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 7.0e-178 627.5 363 79.3
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 7.0e-178 627.5 361 80.1
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 9.1e-178 627.1 362 80.4
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 1.2e-177 626.7 362 80.9
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.0e-177 625.9 361 79.5
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 2.0e-177 625.9 362 80.7
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 3.5e-177 625.2 361 79.8
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 4.5e-177 624.8 362 80.4
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 4.5e-177 624.8 365 80.0
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 4.5e-177 624.8 361 80.9
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.0e-176 623.6 362 80.1
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 1.3e-176 623.2 365 80.5
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.3e-176 623.2 361 79.8
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.7e-176 622.9 361 80.9
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.7e-176 622.9 368 80.4
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 1.7e-176 622.9 363 79.6
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.2e-176 622.5 367 78.7
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 2.9e-176 622.1 363 80.4
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 5.0e-176 621.3 361 79.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 8.5e-176 620.5 362 80.1
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.1e-175 620.2 362 79.3
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.5e-175 619.8 362 79.3
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 3.2e-175 618.6 360 78.9
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-174 616.7 361 79.8
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.2e-174 616.7 364 79.1
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 1.6e-174 616.3 362 79.6
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 2.1e-174 615.9 362 79.6
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.1e-174 615.9 362 79.6
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 4.7e-174 614.8 361 79.2
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 8.0e-174 614.0 363 78.0
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.0e-173 613.6 363 79.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.0e-173 613.6 363 79.3
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.4e-173 613.2 361 78.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 1.4e-173 613.2 365 78.4
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.4e-173 613.2 362 78.5
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.8e-173 612.8 369 76.2
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.2e-172 610.1 363 77.1
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 2.0e-172 609.4 363 77.4
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 5.7e-172 607.8 363 77.1
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.1e-170 602.1 364 78.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 5.4e-170 601.3 362 76.0
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.5e-167 593.2 368 75.0
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 7.2e-167 590.9 366 75.7
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 2.1e-166 589.3 365 75.9
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 2.1e-166 589.3 392 73.2
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 2.1e-166 589.3 376 74.2
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.0e-165 587.0 362 76.0
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 1.0e-165 587.0 370 74.6
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.8e-165 586.3 362 76.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.3e-165 585.9 363 77.4
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 6.8e-165 584.3 360 76.4
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 2.9e-163 578.9 362 75.4
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.9e-163 578.2 352 75.3
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 1.1e-162 577.0 362 75.4
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 1.1e-162 577.0 363 74.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 4.1e-162 575.1 380 72.9
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.6e-161 571.6 379 72.3
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 5.0e-160 568.2 375 72.8
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.9e-159 566.2 368 72.6
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.3e-159 565.5 362 73.5
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 4.3e-159 565.1 358 74.0
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 4.3e-159 565.1 362 72.9
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 9.5e-159 563.9 362 72.9
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 2.3e-157 559.3 362 72.9
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 5.4e-154 548.1 361 72.0
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.1e-151 540.4 364 69.8
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.5e-148 530.0 352 71.0
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.3e-144 516.9 304 79.9
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 5.6e-143 511.5 299 80.6
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 4.0e-141 505.4 373 64.3
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 6.8e-141 504.6 283 84.1
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.3e-139 500.4 363 67.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 8.4e-139 497.7 283 82.7
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.0e-136 490.7 365 64.7
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 4.7e-134 481.9 268 81.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.1e-133 480.7 369 64.0
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 3.0e-128 462.6 267 80.5
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.1e-127 460.7 306 72.2
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 6.4e-115 418.3 343 60.3
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.1e-114 417.5 241 81.7
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 5.8e-108 395.2 222 79.7
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 1.0e-107 394.4 227 82.4
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.6e-105 387.1 223 78.5
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 3.9e-80 302.8 183 74.3
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.9e-66 257.3 212 62.3
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 4.0e-48 196.4 111 77.5
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 7.5e-47 192.2 113 74.3
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 1.7e-46 191.0 114 72.8
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.7e-44 183.7 115 71.3
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 3.5e-44 183.3 120 70.0
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.8e-44 182.2 114 71.1
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.8e-44 182.2 114 71.1
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.5e-42 175.3 115 69.6
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.4e-32 144.8 95 71.6
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 6.4e-30 136.0 108 58.3
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.6e-17 94.7 57 71.9
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 2.9e-14 84.0 54 70.4
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 4.9e-14 83.2 54 68.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 6.4e-14 82.8 54 70.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.4e-13 81.6 287 27.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.6e-12 78.2 54 66.7
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 1.1e-08 65.5 43 67.4
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.2e-07 62.0 286 23.4
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 9.9e-07 58.9 64 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3862 Anthoceros agrestis HOM05D001684 ORTHO05D001613 4.9e-06 56.6 169 25.4
Mapoly0041s0070 Marchantia polymorpha HOM05D057041 ORTHO05D018939 4.9e-06 56.6 202 24.3


User provided reference genes

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