Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 5.8e-130 467.6 243 100.0
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.3e-92 343.6 239 72.8
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 5.3e-83 311.6 241 66.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 5.5e-80 301.6 240 66.7
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 9.3e-80 300.8 242 65.7
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 7.9e-79 297.7 202 73.3
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.0e-78 297.4 201 71.6
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.3e-78 296.2 201 74.1
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 8.7e-78 294.3 203 71.9
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.1e-77 293.9 203 73.4
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.5e-77 293.5 201 73.1
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 5.6e-77 291.6 246 61.4
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.3e-76 290.4 209 67.9
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.1e-76 289.7 201 72.1
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 2.8e-76 289.3 239 62.8
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.7e-76 288.9 238 63.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 8.2e-76 287.7 179 79.3
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 8.2e-76 287.7 203 71.9
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.4e-75 287.0 236 64.8
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.8e-75 286.6 198 68.7
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.4e-75 286.2 199 72.9
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 3.1e-75 285.8 201 71.6
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.0e-75 285.4 241 63.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 5.3e-75 285.0 241 60.2
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 6.9e-75 284.6 240 63.3
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 9.0e-75 284.3 242 61.6
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 9.0e-75 284.3 201 68.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 9.0e-75 284.3 213 65.7
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.5e-74 283.5 201 67.7
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.5e-74 283.5 217 65.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.5e-74 283.5 237 64.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.5e-74 283.5 210 69.5
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 2.6e-74 282.7 215 65.6
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 2.6e-74 282.7 239 62.3
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.6e-74 282.7 240 61.7
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 3.4e-74 282.3 246 61.8
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 3.4e-74 282.3 215 64.7
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.5e-74 282.0 242 61.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 5.8e-74 281.6 225 63.6
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 5.8e-74 281.6 206 67.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.0e-73 280.8 202 69.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.7e-73 280.0 224 63.8
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.7e-73 280.0 200 67.5
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 2.2e-73 279.6 200 68.0
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 2.9e-73 279.3 201 68.2
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.8e-73 278.9 240 58.3
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.8e-73 278.9 240 60.8
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 3.8e-73 278.9 207 65.7
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 3.8e-73 278.9 203 66.5
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 4.9e-73 278.5 239 61.9
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 6.5e-73 278.1 204 66.2
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 6.5e-73 278.1 201 69.7
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 6.5e-73 278.1 237 63.3
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 8.4e-73 277.7 196 67.9
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 8.4e-73 277.7 206 66.5
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.4e-72 276.9 239 61.5
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.9e-72 276.6 238 60.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 3.2e-72 275.8 206 67.0
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 7.1e-72 274.6 202 65.8
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 7.1e-72 274.6 202 65.8
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.2e-71 273.9 204 64.7
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.6e-71 273.5 239 61.1
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.6e-71 273.5 206 66.5
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.1e-71 273.1 277 56.3
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.1e-71 273.1 201 65.7
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 7.9e-71 271.2 239 60.3
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 7.9e-71 271.2 204 64.2
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 7.9e-71 271.2 190 68.4
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 7.9e-71 271.2 229 59.8
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 7.9e-71 271.2 239 61.1
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 7.9e-71 271.2 241 58.5
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.0e-70 270.8 201 66.2
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.3e-70 270.4 202 65.3
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 3.9e-70 268.9 206 64.1
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 5.1e-70 268.5 202 67.3
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 6.7e-70 268.1 220 61.8
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 6.7e-70 268.1 202 66.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 6.7e-70 268.1 239 58.6
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.5e-69 266.9 213 64.3
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.5e-69 266.2 209 64.6
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 4.3e-69 265.4 238 61.3
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 7.4e-69 264.6 202 65.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-67 260.8 203 60.6
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.4e-67 260.4 213 62.0
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 5.3e-67 258.5 288 51.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 6.9e-67 258.1 241 54.8
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.6e-66 256.1 223 61.0
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.9e-66 255.0 184 68.5
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.2e-64 248.8 256 53.9
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 4.2e-64 248.8 217 59.4
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.1e-63 245.0 182 68.1
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 6.1e-63 245.0 236 55.9
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.0e-62 244.2 203 61.1
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 5.1e-62 241.9 204 58.8
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 6.7e-62 241.5 204 57.8
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 4.8e-60 235.3 238 57.6
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.1e-59 234.2 174 69.5
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.6e-55 220.3 152 71.1
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.1e-51 207.6 133 74.4
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.5e-50 203.8 205 48.3
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 7.7e-50 201.4 132 72.7
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.7e-44 183.7 184 54.9
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 8.2e-44 181.4 150 61.3
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.5e-42 176.0 110 78.2
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.7e-41 173.7 174 50.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.1e-39 165.2 145 60.0
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.8e-35 153.7 113 70.8
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.7e-33 147.1 126 61.9
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.4e-30 137.5 127 56.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 4.4e-29 132.5 111 61.3
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-26 124.4 91 69.2
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 7.7e-26 121.7 116 56.9
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.9e-25 119.8 84 72.6
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 3.0e-22 109.8 91 62.6
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 6.3e-20 102.1 84 61.9
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 8.3e-20 101.7 65 75.4
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 4.1e-19 99.4 161 39.8
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 5.4e-19 99.0 88 53.4
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 5.4e-19 99.0 112 50.9
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.3e-17 94.4 70 62.9
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 1.2e-15 87.8 78 52.6
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 6.4e-12 75.5 70 54.3
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 5.4e-11 72.4 68 54.4
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 6.2e-07 58.9 50 58.0


User provided reference genes

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