Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 8.5e-296 1019.6 528 100.0
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.8e-246 855.1 533 82.2
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 3.4e-236 821.6 530 80.8
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 1.5e-228 796.2 535 77.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.2e-206 722.6 538 68.0
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 6.9e-205 717.6 535 67.5
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 4.7e-201 704.9 538 66.4
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 1.4e-200 703.4 534 66.9
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 5.1e-200 701.4 475 72.0
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 9.7e-199 697.2 523 66.5
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 2.8e-198 695.7 510 67.8
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 3.7e-198 695.3 475 71.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 6.3e-198 694.5 527 66.0
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 3.4e-196 688.7 502 67.3
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 7.7e-196 687.6 459 72.5
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 7.7e-196 687.6 538 64.1
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 7.7e-196 687.6 534 65.0
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 8.5e-195 684.1 538 65.2
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.9e-194 682.9 470 70.9
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 2.5e-194 682.6 478 70.3
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 4.2e-194 681.8 510 66.9
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 5.5e-194 681.4 536 64.7
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.2e-193 680.2 499 67.9
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.6e-193 679.9 537 65.2
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.6e-193 679.9 478 70.1
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.6e-193 679.9 478 69.9
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 2.1e-193 679.5 487 67.6
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 3.6e-193 678.7 533 64.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 8.0e-193 677.6 543 63.0
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.0e-192 677.2 467 69.4
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 1.4e-192 676.8 546 63.0
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.8e-192 676.4 539 65.1
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 1.8e-192 676.4 525 65.9
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 3.0e-192 675.6 458 71.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 3.0e-192 675.6 473 69.8
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.9e-192 675.2 542 64.2
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 3.9e-192 675.2 528 64.4
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 8.8e-192 674.1 539 64.0
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.3e-191 672.2 521 64.9
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 3.3e-191 672.2 530 63.8
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 4.4e-191 671.8 528 64.0
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 4.4e-191 671.8 527 63.8
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.4e-191 671.0 472 70.1
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 4.8e-190 668.3 485 67.4
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 8.2e-190 667.5 515 64.9
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 8.2e-190 667.5 481 68.4
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 4.1e-189 665.2 538 62.8
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.6e-188 663.3 513 64.1
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.3e-187 660.2 534 61.8
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 2.2e-187 659.4 543 60.6
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 3.8e-187 658.7 493 67.3
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 5.0e-187 658.3 522 64.2
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.1e-186 657.1 516 64.5
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.1e-186 657.1 474 65.8
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.2e-186 655.2 488 65.6
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 7.2e-186 654.4 463 67.2
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 1.2e-185 653.7 527 61.9
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 4.7e-185 651.7 535 60.9
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 1.4e-184 650.2 537 61.5
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 3.7e-182 642.1 474 65.2
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.1e-181 640.6 557 58.2
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.4e-181 640.2 473 65.3
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.4e-181 639.4 472 65.7
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.1e-181 639.0 472 65.7
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 5.3e-181 638.3 541 60.1
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 5.3e-181 638.3 471 66.5
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 5.3e-181 638.3 442 68.1
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 3.5e-180 635.6 496 64.9
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.0e-179 634.0 487 63.9
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.0e-179 634.0 474 64.8
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.3e-179 633.6 539 59.6
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.7e-179 633.3 471 65.4
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.8e-179 632.1 472 65.0
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.5e-179 631.3 463 65.2
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.9e-178 629.8 542 59.6
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 2.5e-178 629.4 473 64.7
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.0e-176 624.0 492 64.0
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.8e-176 623.2 550 59.5
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.5e-175 620.2 523 61.2
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.4e-175 619.0 440 67.3
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.7e-174 616.7 472 63.8
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.8e-173 613.2 472 63.3
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 4.1e-173 612.1 526 58.2
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.9e-171 605.9 546 59.3
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.5e-170 602.8 516 61.0
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.3e-170 602.4 509 59.1
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 3.6e-169 599.0 450 65.1
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 6.8e-168 594.7 450 64.4
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 3.4e-167 592.4 524 57.4
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.8e-167 590.9 459 61.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 5.6e-162 575.1 441 63.3
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 6.1e-161 571.6 474 60.5
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 1.0e-155 554.3 448 59.4
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.2e-151 540.8 512 53.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.3e-147 527.3 533 54.6
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 5.6e-146 521.9 488 55.5
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 2.3e-144 516.5 373 68.6
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 2.2e-142 510.0 470 58.1
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.4e-136 490.0 369 62.9
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 2.2e-134 483.4 449 51.9
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 1.9e-125 453.8 397 56.2
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 7.1e-125 451.8 491 47.7
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 6.0e-124 448.7 452 48.7
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 1.5e-122 444.1 459 49.0
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.1e-121 440.3 356 61.0
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 3.4e-119 433.0 469 47.3
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.6e-111 406.8 473 44.6
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.6e-108 396.0 415 52.8
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 2.8e-105 386.7 439 43.3
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 6.3e-73 279.3 464 33.2
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 8.8e-59 232.3 425 31.8
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 8.9e-51 205.7 383 38.4
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 6.6e-46 189.5 134 62.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 1.4e-43 181.8 138 65.9
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 3.1e-43 180.6 137 59.1
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 3.0e-38 164.1 107 75.7
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 2.8e-36 157.5 237 39.7
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 8.0e-36 156.0 484 25.6
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.7e-22 111.7 94 58.5
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 6.6e-22 109.8 92 52.2
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 1.2e-20 105.5 114 52.6
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 8.1e-20 102.8 208 33.2
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 1.4e-19 102.1 68 67.6
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 6.8e-19 99.8 120 50.0
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.3e-17 95.5 195 32.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 2.4e-16 91.3 220 29.5
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 1.3e-14 85.5 80 58.8
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 6.2e-12 76.6 431 22.7
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.4e-11 75.5 119 42.9
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 3.9e-06 57.4 50 56.0


User provided reference genes

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