Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 2.9e-76 288.5 145 100.0
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.3e-36 156.8 84 85.7
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 7.9e-34 147.5 112 60.7
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 4.3e-32 141.7 117 56.4
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 7.4e-32 141.0 142 50.7
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 2.1e-31 139.4 84 73.8
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 2.1e-31 139.4 83 74.7
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 4.8e-31 138.3 84 75.0
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 6.2e-31 137.9 83 72.3
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 1.1e-30 137.1 84 69.0
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.1e-30 137.1 84 69.0
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.4e-30 136.7 84 72.6
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 1.8e-30 136.3 84 69.0
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 2.4e-30 136.0 85 67.1
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 2.4e-30 136.0 80 75.0
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 2.4e-30 136.0 76 76.3
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 2.4e-30 136.0 84 72.6
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 6.9e-30 134.4 79 70.9
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 9.0e-30 134.0 83 66.3
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 9.0e-30 134.0 123 56.1
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 9.0e-30 134.0 84 72.6
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.2e-29 133.7 71 77.5
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 1.5e-29 133.3 82 72.0
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 2.0e-29 132.9 84 70.2
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.0e-29 132.9 84 67.9
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 2.0e-29 132.9 84 73.8
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 2.6e-29 132.5 80 71.2
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 2.6e-29 132.5 83 66.3
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 2.6e-29 132.5 83 67.5
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 2.6e-29 132.5 79 74.7
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 2.6e-29 132.5 79 74.7
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 3.4e-29 132.1 134 49.3
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 3.4e-29 132.1 78 76.9
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 4.5e-29 131.7 76 76.3
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 4.5e-29 131.7 84 71.4
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 5.8e-29 131.3 84 65.5
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 5.8e-29 131.3 85 72.9
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 5.8e-29 131.3 85 72.9
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 7.6e-29 131.0 84 70.2
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 7.6e-29 131.0 84 71.4
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 9.9e-29 130.6 85 68.2
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 9.9e-29 130.6 84 71.4
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.3e-28 130.2 76 73.7
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 1.7e-28 129.8 76 69.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 1.7e-28 129.8 76 69.7
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 1.7e-28 129.8 82 73.2
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 2.9e-28 129.0 86 69.8
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 3.8e-28 128.6 84 67.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 6.4e-28 127.9 83 63.9
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 8.4e-28 127.5 117 53.0
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.4e-28 127.5 84 69.0
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 1.4e-27 126.7 76 68.4
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 1.4e-27 126.7 84 67.9
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.9e-27 126.3 76 68.4
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.9e-27 126.3 74 75.7
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 1.9e-27 126.3 79 73.4
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 5.5e-27 124.8 82 68.3
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.2e-26 123.6 85 67.1
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 4.6e-26 121.7 91 62.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 1.3e-25 120.2 71 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 6.7e-25 117.9 80 65.0
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 1.9e-24 116.3 70 72.9
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.3e-22 108.2 76 60.5
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.3e-22 108.2 76 60.5
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 1.5e-21 106.7 66 71.2
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 4.5e-21 105.1 69 62.3
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 5.8e-21 104.8 83 56.6
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.8e-21 104.8 72 63.9
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.8e-21 104.8 72 63.9
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.8e-21 104.8 72 63.9
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 7.6e-21 104.4 79 62.0
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 1.7e-20 103.2 70 62.9
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 1.7e-20 103.2 61 73.8
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 4.9e-20 101.7 74 66.2
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 6.5e-20 101.3 69 62.3
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 8.4e-20 100.9 69 68.1
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 1.1e-19 100.5 69 63.8
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 5.5e-19 98.2 119 44.5
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 1.6e-18 96.7 68 67.6
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.6e-18 96.7 56 71.4
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 3.5e-18 95.5 94 48.9
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 3.5e-18 95.5 94 48.9
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.0e-17 94.0 70 62.9
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 9.7e-16 87.4 84 47.6
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 9.7e-16 87.4 83 50.6
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.8e-15 85.9 62 64.5
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 3.7e-15 85.5 84 50.0
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 3.7e-15 85.5 56 67.9
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 6.3e-15 84.7 86 52.3
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 2.4e-14 82.8 78 48.7
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 1.5e-08 63.5 49 63.3
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 4.3e-08 62.0 44 61.4
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.2e-07 59.7 38 71.1
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 8.2e-07 57.8 41 63.4
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.4e-06 57.0 50 64.0


User provided reference genes

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