Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0407271 Helianthus annuus HOM05D000097 ORTHO05D013868 0.0e+00 1277.3 637 100.0
HanXRQChr03g0064161 Helianthus annuus HOM05D000097 ORTHO05D013868 8.6e-218 760.8 698 60.0
HanXRQChr03g0064621 Helianthus annuus HOM05D000097 ORTHO05D013868 6.8e-122 442.2 244 88.9
HanXRQChr03g0064111 Helianthus annuus HOM05D000097 ORTHO05D013868 9.2e-119 431.8 555 46.5
ECA246G0417 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.9e-76 291.2 658 32.4
HanXRQChr03g0064091 Helianthus annuus HOM05D000097 ORTHO05D013868 4.6e-70 270.0 577 35.5
ECA246G5130 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.2e-55 219.5 528 30.1
ECA234G4647 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.7e-48 198.4 523 30.8
ECA240G4269 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.3e-43 179.9 345 39.1
Lsat_1_v5_gn_7_51200 Lactuca sativa HOM05D000097 ORTHO05D000041 6.9e-42 176.4 420 33.1
HanXRQChr10g0303341 Helianthus annuus HOM05D000097 ORTHO05D000041 1.1e-39 169.1 363 36.6
ECA240G2940 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.5e-39 167.9 366 33.1
HanXRQChr02g0046131 Helianthus annuus HOM05D000097 ORTHO05D000041 3.0e-37 161.0 370 34.1
HanXRQChr09g0243621 Helianthus annuus HOM05D000097 ORTHO05D000041 2.6e-36 157.9 384 32.6
Lsat_1_v5_gn_7_50661 Lactuca sativa HOM05D000097 ORTHO05D000041 1.7e-35 155.2 321 33.0
HanXRQChr09g0243801 Helianthus annuus HOM05D000097 ORTHO05D000041 4.8e-35 153.7 375 32.0
Lsat_1_v5_gn_7_48860 Lactuca sativa HOM05D000097 ORTHO05D000041 2.0e-33 148.3 382 31.7
Lsat_1_v5_gn_7_49061 Lactuca sativa HOM05D000097 ORTHO05D000041 3.5e-33 147.5 342 35.7
ECA238G0255 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.0e-32 146.0 675 24.4
ECA240G1123 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.0e-32 146.0 356 33.4
ECA240G1960 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.7e-30 137.1 211 38.9
HanXRQChr03g0064611 Helianthus annuus HOM05D000097 ORTHO05D000041 2.3e-29 134.8 207 42.5
HanXRQChr03g0064701 Helianthus annuus HOM05D000097 ORTHO05D000041 7.7e-25 119.8 162 45.7
Lsat_1_v5_gn_7_39281 Lactuca sativa HOM05D000097 ORTHO05D000041 1.3e-24 119.0 374 25.4
Lsat_1_v5_gn_7_39020 Lactuca sativa HOM05D000097 ORTHO05D000041 2.2e-24 118.2 362 27.1
HanXRQChr09g0243431 Helianthus annuus HOM05D000097 ORTHO05D000041 6.5e-24 116.7 216 37.0
ECA240G4035 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.2e-23 114.4 310 29.7
HanXRQChr08g0223211 Helianthus annuus HOM05D000097 ORTHO05D000041 9.4e-23 112.8 138 44.9
ECA238G4427 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.7e-22 110.5 273 30.0
HanXRQChr09g0243851 Helianthus annuus HOM05D000046 ORTHO05D000472 8.0e-22 109.8 119 45.4
Dinv40326 Davidia involucrata HOM05D000097 ORTHO05D000041 1.0e-21 109.4 296 30.7
Lsat_1_v5_gn_8_125660 Lactuca sativa HOM05D000097 ORTHO05D000041 2.3e-21 108.2 370 28.1
HanXRQChr03g0064711 Helianthus annuus HOM05D000097 ORTHO05D013868 1.2e-20 105.9 115 47.0
Lsat_1_v5_gn_7_44800 Lactuca sativa HOM05D000097 ORTHO05D000041 1.2e-20 105.9 373 25.2
Lsat_1_v5_gn_8_128001 Lactuca sativa HOM05D000097 ORTHO05D000041 1.5e-20 105.5 369 25.7
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 2.0e-20 105.1 353 27.8
Lsat_1_v5_gn_9_86401 Lactuca sativa HOM05D000097 ORTHO05D013868 3.4e-20 104.4 123 38.2
ECA233G0117 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.3e-19 102.4 105 42.9
Dinv13278 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-19 102.1 229 32.3
HanXRQChr11g0341571 Helianthus annuus HOM05D000097 ORTHO05D017907 4.8e-19 100.5 82 61.0
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 6.3e-19 100.1 236 30.1
ECA247G0481 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.4e-18 99.0 249 29.7
Lsat_1_v5_gn_7_50541 Lactuca sativa HOM05D000097 ORTHO05D000041 7.0e-18 96.7 112 42.9
Lsat_1_v5_gn_1_85600 Lactuca sativa HOM05D000097 ORTHO05D000041 9.1e-18 96.3 266 26.3
Lsat_1_v5_gn_7_37621 Lactuca sativa HOM05D000097 ORTHO05D000041 1.6e-17 95.5 373 26.8
ECA236G2161 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.5e-17 94.0 370 24.6
HanXRQChr05g0136431 Helianthus annuus HOM05D001339 ORTHO05D013868 4.5e-17 94.0 93 52.7
ECA236G3757 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.3e-16 92.4 377 24.9
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 2.9e-16 91.3 122 42.6
HanXRQChr09g0243471 Helianthus annuus HOM05D000097 ORTHO05D017907 5.0e-16 90.5 146 39.7
HanXRQChr09g0243681 Helianthus annuus HOM05D000097 ORTHO05D000041 5.0e-16 90.5 202 32.7
HanXRQChr10g0282351 Helianthus annuus HOM05D000097 ORTHO05D017907 6.5e-16 90.1 343 26.2
Nitab4.5_0003025g0010 Nicotiana tabacum HOM05D000097 ORTHO05D000041 8.5e-16 89.7 129 40.3
Lsat_1_v5_gn_7_50561 Lactuca sativa HOM05D000097 ORTHO05D000041 1.9e-15 88.6 141 34.0
Lsat_1_v5_gn_7_50461 Lactuca sativa HOM05D000097 ORTHO05D017907 2.5e-15 88.2 158 41.1
ECA248G3700 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.2e-15 87.8 338 22.8
HanXRQChr03g0065541 Helianthus annuus HOM05D000097 ORTHO05D013868 7.2e-15 86.7 120 44.2
Peaxi162Scf00226g00923 Petunia axillaris HOM05D000097 ORTHO05D000041 7.2e-15 86.7 177 32.8
Peaxi162Scf00226g00936 Petunia axillaris HOM05D000097 ORTHO05D000041 1.6e-14 85.5 94 42.6
ECA240G0142 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.6e-14 84.3 359 23.7
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 4.7e-14 84.0 106 38.7
Lsat_1_v5_gn_1_43320 Lactuca sativa HOM05D000097 ORTHO05D000041 4.7e-14 84.0 94 44.7
HanXRQChr13g0394641 Helianthus annuus HOM05D000097 ORTHO05D000041 6.1e-14 83.6 126 38.1
Lsat_1_v5_gn_0_25401 Lactuca sativa HOM05D000097 ORTHO05D000041 1.0e-13 82.8 359 25.3
HanXRQChr09g0243771 Helianthus annuus HOM05D000097 ORTHO05D000041 1.4e-13 82.4 220 32.3
SGA_v2.0_scaffold37G14580 Striga asiatica HOM05D000097 ORTHO05D000041 1.8e-13 82.0 128 38.3
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 5.2e-13 80.5 115 33.9
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 5.2e-13 80.5 114 35.1
HanXRQChr16g0512561 Helianthus annuus HOM05D000097 ORTHO05D000041 8.8e-13 79.7 146 34.9
Migut.J00929 Erythranthe guttata HOM05D000097 ORTHO05D000041 1.5e-12 79.0 102 40.2
HanXRQChr17g0553721 Helianthus annuus HOM05D000097 ORTHO05D000041 2.6e-12 78.2 115 38.3
Lsat_1_v5_gn_7_48920 Lactuca sativa HOM05D000097 ORTHO05D017907 5.7e-12 77.0 123 42.3
Solyc05g041470.2 Solanum lycopersicum HOM05D000097 ORTHO05D013868 5.7e-12 77.0 187 27.8
SGA_v2.0_scaffold91G28110 Striga asiatica HOM05D000097 ORTHO05D000041 7.5e-12 76.6 105 39.0
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 9.8e-12 76.3 105 39.0
SGA_v2.0_scaffold21G09420 Striga asiatica HOM05D000097 ORTHO05D000041 1.7e-11 75.5 176 30.7
HanXRQChr02g0047401 Helianthus annuus HOM05D000097 ORTHO05D000041 2.2e-11 75.1 110 39.1
ECA248G1065 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.8e-11 74.7 114 33.3
Sopen05g025510 Solanum pennellii HOM05D000006 ORTHO05D000001 3.7e-11 74.3 122 34.4
SGA_v2.0_scaffold21G09486 Striga asiatica HOM05D000097 ORTHO05D000041 4.9e-11 73.9 139 36.7
HanXRQChr09g0243391 Helianthus annuus HOM05D000097 ORTHO05D013868 6.3e-11 73.6 78 42.3
Lsat_1_v5_gn_2_40481 Lactuca sativa HOM05D000097 ORTHO05D000041 6.3e-11 73.6 223 27.8
Cfa011240 Carpinus fangiana HOM05D000097 ORTHO05D009232 1.1e-10 72.8 337 24.9
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 1.1e-10 72.8 138 32.6
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 1.1e-10 72.8 102 42.2
ECA240G3252 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.1e-10 72.8 152 40.1
HanXRQChr09g0244201 Helianthus annuus HOM05D000097 ORTHO05D000041 2.4e-10 71.6 116 32.8
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 3.1e-10 71.2 102 42.2
ECA247G3079 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.1e-10 71.2 97 37.1
Migut.L01556 Erythranthe guttata HOM05D000097 ORTHO05D000041 3.1e-10 71.2 121 32.2
Peaxi162Scf00226g00820 Petunia axillaris HOM05D000097 ORTHO05D000041 3.1e-10 71.2 125 34.4
ECA240G2181 Erigeron canadensis HOM05D000097 ORTHO05D013868 9.2e-10 69.7 73 45.2
HanXRQChr04g0103301 Helianthus annuus HOM05D000097 ORTHO05D013868 9.2e-10 69.7 111 32.4
vmacro10274 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 9.2e-10 69.7 112 35.7
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.2e-09 69.3 123 33.3
Haze_02590 Corylus avellana HOM05D000097 ORTHO05D000041 2.7e-09 68.2 245 26.9
Dinv40329 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-09 68.2 164 35.4
HanXRQChr13g0394051 Helianthus annuus HOM05D000097 ORTHO05D000041 2.7e-09 68.2 112 36.6
CiPaw.14G042100 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.5e-09 67.8 298 21.8
HanXRQChr10g0282341 Helianthus annuus HOM05D000097 ORTHO05D000041 3.5e-09 67.8 183 28.4
Lj2A580G21 Lonicera japonica HOM05D000097 ORTHO05D000041 4.5e-09 67.4 321 23.7
Lsat_1_v5_gn_4_140740 Lactuca sativa HOM05D000097 ORTHO05D000041 7.7e-09 66.6 146 29.5
PSO170G5243 Papaver somniferum HOM05D000097 ORTHO05D000041 7.7e-09 66.6 182 27.5
Rhsim08G0003100 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.7e-09 66.6 217 27.2
Nitab4.5_0002209g0040 Nicotiana tabacum HOM05D000097 ORTHO05D000041 1.0e-08 66.2 96 39.6
SGA_v2.0_scaffold21G09484 Striga asiatica HOM05D000097 ORTHO05D000041 1.0e-08 66.2 123 32.5
Dinv13259 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-08 65.9 111 34.2
HanXRQChr09g0248031 Helianthus annuus HOM05D000097 ORTHO05D017907 1.3e-08 65.9 148 31.8
Lsat_1_v5_gn_6_102921 Lactuca sativa HOM05D000097 ORTHO05D000041 1.3e-08 65.9 154 28.6
Lj6A386G19 Lonicera japonica HOM05D014049 ORTHO05D000001 1.3e-08 65.9 104 38.5
Nn5g27916 Nelumbo nucifera HOM05D000097 ORTHO05D009232 1.3e-08 65.9 265 23.4
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-08 65.9 109 33.9
Ciclev10013389m.g Citrus clementina HOM05D014049 ORTHO05D000001 2.3e-08 65.1 120 35.0
Dinv02040 Davidia involucrata HOM05D000097 ORTHO05D000041 2.3e-08 65.1 137 33.6
Dinv13272 Davidia involucrata HOM05D000097 ORTHO05D000041 3.8e-08 64.3 121 33.1
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.8e-08 64.3 115 35.7
GSVIVG01011204001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.8e-08 64.3 207 26.1
Dinv25331 Davidia involucrata HOM05D000097 ORTHO05D000041 6.6e-08 63.5 293 28.0
Solyc05g041570.3 Solanum lycopersicum HOM05D000097 ORTHO05D013868 6.6e-08 63.5 111 32.4
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.6e-08 63.2 114 32.5
Haze_02566 Corylus avellana HOM05D000097 ORTHO05D000041 1.1e-07 62.8 203 28.6
ECA238G2422 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.1e-07 62.8 205 26.8
Hma1.2p1_1497F.1_g287070 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.1e-07 62.8 127 29.1
Lsat_1_v5_gn_9_86381 Lactuca sativa HOM05D000097 ORTHO05D000041 1.5e-07 62.4 198 26.8
SalBow7G3141 Salvia bowleyana HOM05D000097 ORTHO05D000041 1.5e-07 62.4 197 24.4
Dinv13264 Davidia involucrata HOM05D014049 ORTHO05D013593 1.9e-07 62.0 113 34.5
HanXRQChr09g0241021 Helianthus annuus HOM05D000097 ORTHO05D017907 1.9e-07 62.0 206 28.6
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.9e-07 62.0 262 24.4
Haze_02587 Corylus avellana HOM05D000097 ORTHO05D000041 2.5e-07 61.6 208 27.9
Hma1.2p1_1761F.1_g301270 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.5e-07 61.6 111 33.3
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 3.3e-07 61.2 111 30.6
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 3.3e-07 61.2 104 37.5
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-07 61.2 108 34.3
Rhsim03G0104500 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.3e-07 61.2 117 31.6
Lj6A388G43 Lonicera japonica HOM05D000097 ORTHO05D000041 4.3e-07 60.8 104 35.6
Nn5g27907 Nelumbo nucifera HOM05D000097 ORTHO05D000041 4.3e-07 60.8 161 26.1
Oeu044121.1 Olea europaea HOM05D000097 ORTHO05D000041 5.6e-07 60.5 250 23.2
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.3e-07 60.1 121 30.6
Dinv00959 Davidia involucrata HOM05D000097 ORTHO05D000041 7.3e-07 60.1 114 32.5
Dinv11240 Davidia involucrata HOM05D000097 ORTHO05D000041 7.3e-07 60.1 249 25.3
Dinv13260 Davidia involucrata HOM05D000097 ORTHO05D000041 7.3e-07 60.1 114 32.5
ECA236G1642 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.3e-07 60.1 138 29.0
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 7.3e-07 60.1 115 27.0
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.5e-07 59.7 109 31.2
Haze_02551 Corylus avellana HOM05D000097 ORTHO05D000041 9.5e-07 59.7 141 30.5
Dinv24351 Davidia involucrata HOM05D000097 ORTHO05D000041 9.5e-07 59.7 179 24.0
Hma1.2p1_0498F.1_g166570 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 9.5e-07 59.7 170 25.9
Manes.05G191900 Manihot esculenta HOM05D000097 ORTHO05D000041 1.2e-06 59.3 204 28.4
Rhsim02G0235900 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.2e-06 59.3 115 30.4
Lsat_1_v5_gn_7_39341 Lactuca sativa HOM05D000097 ORTHO05D000041 1.6e-06 58.9 209 27.3
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.1e-06 58.5 131 29.0
ECA232G1199 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 58.5 104 31.7
Sopen09g029790 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 58.5 121 28.1
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-06 58.5 121 28.9
Rhsim12G0057200 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.8e-06 58.2 167 29.3
COL.COLO4_36674 Corchorus olitorius HOM05D042556 ORTHO05D000001 3.6e-06 57.8 86 37.2
Haze_02567 Corylus avellana HOM05D000097 ORTHO05D000041 3.6e-06 57.8 292 23.6
Oeu002643.1 Olea europaea HOM05D000097 ORTHO05D000041 3.6e-06 57.8 249 24.9
PSO017G4983 Papaver somniferum HOM05D000097 ORTHO05D000041 3.6e-06 57.8 169 24.3
CiPaw.10G105200 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.7e-06 57.4 161 28.0
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 4.7e-06 57.4 89 38.2
Medtr5g028510 Medicago truncatula HOM05D000097 ORTHO05D000041 4.7e-06 57.4 206 27.2
PSO017G0453 Papaver somniferum HOM05D000097 ORTHO05D000041 4.7e-06 57.4 167 32.9
PGR044G2365 Punica granatum HOM05D000097 ORTHO05D000041 4.7e-06 57.4 293 26.6
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 6.1e-06 57.0 109 31.2
Cc06_g12370 Coffea canephora HOM05D000097 ORTHO05D000041 6.1e-06 57.0 203 26.6
Oeu056859.1 Olea europaea HOM05D000097 ORTHO05D000041 6.1e-06 57.0 248 22.6
PSO724G0433 Papaver somniferum HOM05D000097 ORTHO05D000041 6.1e-06 57.0 197 26.4
Sopen05g009210 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 57.0 118 28.0
Sopen07g026850 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 57.0 118 28.0
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 8.0e-06 56.6 106 32.1
Haze_02588 Corylus avellana HOM05D000097 ORTHO05D000041 8.0e-06 56.6 347 23.6
ECA248G0893 Erigeron canadensis HOM05D000097 ORTHO05D000041 8.0e-06 56.6 204 24.0
RcHm_v2.0_Chr6g0290151 Rosa chinensis HOM05D000097 ORTHO05D000041 8.0e-06 56.6 180 26.1


User provided reference genes

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