Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 9.7e-76 287.0 169 100.0
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 2.9e-48 195.7 143 72.0
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 9.8e-36 154.1 153 69.9
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 7.8e-33 144.4 144 58.3
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.1e-31 140.6 166 60.8
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 1.9e-31 139.8 143 53.1
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 3.3e-31 139.0 145 52.4
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 7.3e-31 137.9 142 54.2
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 7.3e-31 137.9 119 61.3
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 9.5e-31 137.5 156 60.3
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 1.2e-30 137.1 102 66.7
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 1.6e-30 136.7 109 75.2
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.6e-30 136.7 135 55.6
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 2.1e-30 136.3 105 66.7
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 3.6e-30 135.6 139 56.1
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 3.6e-30 135.6 133 56.4
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 4.7e-30 135.2 145 53.8
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 8.0e-30 134.4 86 74.4
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 1.0e-29 134.0 81 72.8
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 1.0e-29 134.0 132 53.0
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.8e-29 133.3 84 72.6
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 1.8e-29 133.3 143 53.8
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 1.8e-29 133.3 163 58.3
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 2.3e-29 132.9 107 62.6
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.3e-29 132.9 82 78.0
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.3e-29 132.9 142 51.4
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 3.1e-29 132.5 105 63.8
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 3.1e-29 132.5 88 69.3
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 3.1e-29 132.5 97 68.0
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 4.0e-29 132.1 85 70.6
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 4.0e-29 132.1 104 61.5
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 4.0e-29 132.1 137 56.2
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 5.2e-29 131.7 144 50.7
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 5.2e-29 131.7 79 77.2
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 6.8e-29 131.3 84 73.8
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 6.8e-29 131.3 84 73.8
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 6.8e-29 131.3 139 51.8
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 6.8e-29 131.3 140 62.9
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 8.9e-29 131.0 102 66.7
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 1.2e-28 130.6 89 69.7
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.2e-28 130.6 113 57.5
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 1.2e-28 130.6 89 71.9
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 1.5e-28 130.2 89 69.7
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 1.5e-28 130.2 89 69.7
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 1.5e-28 130.2 89 69.7
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 1.5e-28 130.2 89 69.7
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.5e-28 130.2 102 62.7
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.5e-28 130.2 112 58.0
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 1.5e-28 130.2 88 70.5
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 1.5e-28 130.2 105 62.9
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 1.5e-28 130.2 102 64.7
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 2.0e-28 129.8 89 68.5
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 2.0e-28 129.8 89 69.7
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 2.0e-28 129.8 142 51.4
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.0e-28 129.8 142 51.4
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.0e-28 129.8 142 51.4
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.0e-28 129.8 82 73.2
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 2.0e-28 129.8 102 65.7
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 2.0e-28 129.8 139 52.5
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 2.6e-28 129.4 116 57.8
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 3.4e-28 129.0 89 68.5
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 3.4e-28 129.0 76 80.3
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 4.4e-28 128.6 90 70.0
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 4.4e-28 128.6 103 64.1
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 5.8e-28 128.3 89 67.4
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 5.8e-28 128.3 90 67.8
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 5.8e-28 128.3 84 69.0
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 5.8e-28 128.3 112 59.8
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 5.8e-28 128.3 96 63.5
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 5.8e-28 128.3 146 54.1
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 7.5e-28 127.9 90 68.9
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 7.5e-28 127.9 70 85.7
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 9.8e-28 127.5 116 58.6
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 9.8e-28 127.5 80 71.2
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 9.8e-28 127.5 113 58.4
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 9.8e-28 127.5 88 67.0
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 1.3e-27 127.1 146 48.6
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 1.3e-27 127.1 145 50.3
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.3e-27 127.1 144 51.4
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 2.2e-27 126.3 90 63.3
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 6.4e-27 124.8 67 83.6
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 6.4e-27 124.8 111 68.5
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 6.4e-27 124.8 143 49.7
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 6.4e-27 124.8 138 51.4
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 8.3e-27 124.4 83 71.1
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 8.3e-27 124.4 101 60.4
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 1.1e-26 124.0 90 61.1
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 1.4e-26 123.6 138 51.4
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.4e-26 122.9 111 72.1
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 2.4e-26 122.9 92 66.3
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 3.2e-26 122.5 89 65.2
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 9.2e-26 120.9 140 50.7
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.0e-25 119.8 92 66.3
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 2.0e-25 119.8 89 64.0
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 2.0e-25 119.8 83 67.5
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 3.5e-25 119.0 81 67.9
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 4.6e-25 118.6 142 48.6
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 6.0e-25 118.2 112 54.5
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 1.0e-24 117.5 137 48.2
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 1.3e-24 117.1 117 50.4
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 2.3e-24 116.3 88 60.2
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 2.3e-24 116.3 81 61.7
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 2.3e-24 116.3 78 69.2
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 5.0e-24 115.2 90 61.1
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 1.5e-23 113.6 92 60.9
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.3e-23 112.1 142 49.3
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 7.3e-23 111.3 67 71.6
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.2e-22 110.5 88 56.8
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 1.2e-22 110.5 78 69.2
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 2.8e-22 109.4 86 59.3
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 3.6e-22 109.0 140 45.0
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 3.6e-22 109.0 81 63.0
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 8.0e-22 107.8 81 61.7
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 1.1e-21 107.5 66 80.3
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 2.0e-20 103.2 146 45.9
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 5.8e-20 101.7 60 78.3
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 1.7e-19 100.1 89 60.7
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 4.9e-19 98.6 127 44.9
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.1e-18 97.4 122 47.5
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 2.4e-18 96.3 122 46.7
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 5.4e-18 95.1 141 44.7
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 1.6e-17 93.6 109 44.0
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 2.7e-17 92.8 86 54.7
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 1.5e-15 87.0 68 60.3
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 1.5e-15 87.0 68 60.3
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.1e-13 80.9 59 59.3
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 5.8e-12 75.1 81 49.4
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.2e-11 73.2 80 65.0
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.2e-11 73.2 80 65.0
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.9e-11 72.0 80 55.0
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 2.1e-09 66.6 114 41.2
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 2.3e-08 63.2 91 42.9
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 7.3e-07 58.2 42 57.1


User provided reference genes

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