Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 3.6e-266 921.0 455 100.0
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 2.5e-158 562.8 380 76.8
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 6.1e-133 478.4 355 69.3
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 4.1e-121 439.1 375 63.2
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 2.3e-116 423.3 394 61.9
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 4.0e-92 342.8 503 44.5
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 8.9e-92 341.7 447 49.7
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 5.8e-91 339.0 501 43.9
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.2e-90 337.0 484 45.2
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 2.4e-89 333.6 471 47.6
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 2.1e-88 330.5 479 45.7
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 1.3e-87 327.8 491 45.2
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 1.1e-86 324.7 491 45.4
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 1.5e-86 324.3 503 45.3
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 3.3e-86 323.2 479 45.3
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 5.6e-86 322.4 427 49.2
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 1.2e-85 321.2 501 43.9
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 2.1e-85 320.5 472 46.2
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.1e-85 320.5 442 45.9
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 3.6e-85 319.7 497 44.7
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 1.1e-84 318.2 486 44.9
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 1.4e-84 317.8 401 48.4
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 1.8e-84 317.4 490 44.9
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 2.4e-84 317.0 474 45.1
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 6.8e-84 315.5 435 46.0
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 8.9e-84 315.1 490 44.1
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 1.2e-83 314.7 486 44.4
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.2e-83 314.7 486 44.7
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 2.0e-83 313.9 497 44.1
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 9.9e-83 311.6 400 47.8
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 4.9e-82 309.3 440 46.6
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 1.1e-81 308.1 500 43.2
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 7.1e-81 305.4 502 42.2
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 7.1e-81 305.4 491 44.2
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 7.1e-81 305.4 399 47.9
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 3.5e-80 303.1 486 42.8
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.3e-79 300.4 462 43.5
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 1.1e-78 298.1 444 45.5
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 1.5e-78 297.7 495 42.2
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 1.9e-78 297.4 444 45.5
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 3.3e-78 296.6 405 47.9
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 4.3e-78 296.2 460 43.5
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 4.3e-78 296.2 388 48.5
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 4.3e-78 296.2 388 48.5
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 7.3e-78 295.4 401 46.1
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 7.3e-78 295.4 415 46.5
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 1.6e-77 294.3 428 44.4
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 2.1e-77 293.9 468 43.2
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 3.6e-77 293.1 395 46.8
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 3.6e-77 293.1 397 45.8
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 3.6e-77 293.1 419 46.1
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 3.6e-77 293.1 396 47.7
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 4.7e-77 292.7 397 46.9
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 4.7e-77 292.7 470 42.3
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.7e-77 292.7 470 42.3
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.7e-77 292.7 470 42.3
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.7e-77 292.7 470 42.3
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 6.2e-77 292.4 462 42.6
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 8.1e-77 292.0 435 44.4
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 8.1e-77 292.0 446 45.3
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 3.1e-76 290.0 396 48.7
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 5.3e-76 289.3 462 43.9
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 9.0e-76 288.5 375 47.5
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 9.0e-76 288.5 524 42.0
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 1.5e-75 287.7 391 45.8
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 2.6e-75 287.0 420 45.0
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 3.4e-75 286.6 465 41.7
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 3.4e-75 286.6 375 47.2
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 5.8e-75 285.8 397 47.6
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 5.8e-75 285.8 440 45.0
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.3e-74 284.6 454 43.0
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.7e-74 284.3 470 41.5
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 3.8e-74 283.1 459 42.3
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 4.9e-74 282.7 455 44.0
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 1.1e-73 281.6 342 49.1
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 1.9e-73 280.8 406 45.6
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 2.4e-73 280.4 454 42.7
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 3.2e-73 280.0 432 45.1
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 5.4e-73 279.3 349 50.1
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 5.4e-73 279.3 519 41.4
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 9.3e-73 278.5 198 71.2
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 9.3e-73 278.5 198 71.2
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 9.3e-73 278.5 341 49.3
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 1.2e-72 278.1 430 44.9
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 2.1e-72 277.3 520 39.6
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 4.6e-72 276.2 342 49.1
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 6.0e-72 275.8 395 45.8
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 7.8e-72 275.4 198 68.7
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 1.7e-71 274.2 195 71.3
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 2.3e-71 273.9 299 52.5
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 3.0e-71 273.5 195 70.3
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 1.5e-70 271.2 350 48.3
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 1.9e-70 270.8 249 59.0
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 2.8e-69 266.9 241 58.9
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 2.8e-69 266.9 317 49.8
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 6.2e-69 265.8 374 47.1
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 8.1e-69 265.4 385 45.5
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.4e-68 264.6 247 59.9
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 1.8e-68 264.2 237 60.3
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 4.0e-68 263.1 234 61.1
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 7.6e-67 258.8 306 49.7
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 2.9e-66 256.9 438 41.6
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 1.1e-65 255.0 504 38.9
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 1.1e-65 255.0 378 43.9
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 1.8e-63 247.7 233 59.2
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 9.6e-62 241.9 219 59.8
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 1.3e-61 241.5 596 35.6
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 2.1e-61 240.7 339 47.5
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 4.5e-59 233.0 237 55.7
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 4.5e-59 233.0 241 54.8
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 7.6e-59 232.3 272 50.4
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 1.2e-56 224.9 276 50.0
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 1.1e-54 218.4 217 53.0
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 5.6e-54 216.1 445 39.6
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 2.8e-53 213.8 219 51.1
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 1.0e-50 205.3 406 40.1
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 2.8e-45 187.2 246 46.3
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 4.1e-44 183.3 392 36.7
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 1.1e-38 165.2 330 37.6
Atru.chr8.2134 Acer truncatum HOM05D005357 ORTHO05D006354 2.6e-35 154.1 110 72.7
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 2.6e-35 154.1 384 34.6
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 3.4e-35 153.7 167 45.5
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 8.5e-34 149.1 254 40.9
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 1.0e-31 142.1 258 36.8
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 3.3e-30 137.1 218 37.2
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 4.8e-29 133.3 384 33.9
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.5e-27 128.3 269 36.4
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 3.5e-27 127.1 383 31.1
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 1.3e-26 125.2 102 59.8
PGSC0003DMG401020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.7e-26 124.8 123 57.7
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 1.9e-25 121.3 202 36.1
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 1.2e-24 118.6 106 48.1
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 3.3e-22 110.5 322 34.2
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 6.1e-16 89.7 264 33.7
CSS0030830 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 1.8e-15 88.2 74 64.9
Rhsim01G0256700 Rhododendron simsii HOM05D005357 ORTHO05D004574 4.5e-11 73.6 86 47.7
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 5.2e-07 60.1 188 34.0


User provided reference genes

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