Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 3.8e-79 298.1 152 100.0
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 3.1e-57 225.3 158 82.3
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 3.0e-44 182.2 116 85.3
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 4.5e-40 168.3 124 75.0
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 3.0e-36 155.6 139 59.7
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 4.0e-36 155.2 149 61.7
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 5.2e-36 154.8 156 59.0
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 8.8e-36 154.1 99 81.8
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 8.8e-36 154.1 99 81.8
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 8.8e-36 154.1 105 73.3
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 2.0e-35 152.9 134 61.2
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 2.6e-35 152.5 105 73.3
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.3e-35 152.1 157 56.7
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 3.3e-35 152.1 137 61.3
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 5.7e-35 151.4 137 61.3
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.3e-34 150.2 157 56.1
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 1.3e-34 150.2 157 56.1
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.7e-34 149.8 156 57.1
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 1.7e-34 149.8 106 72.6
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 2.2e-34 149.4 105 70.5
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 2.8e-34 149.1 165 56.4
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.8e-34 149.1 88 77.3
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 2.8e-34 149.1 104 69.2
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 6.3e-34 147.9 159 57.9
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.1e-33 147.1 88 76.1
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 1.8e-33 146.4 158 58.9
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 2.4e-33 146.0 119 66.4
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 4.1e-33 145.2 87 75.9
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 9.1e-33 144.1 111 69.4
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 1.2e-32 143.7 101 71.3
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.6e-32 143.3 161 54.7
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 2.0e-32 142.9 102 72.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 2.0e-32 142.9 163 53.4
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 2.0e-32 142.9 143 57.3
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 4.5e-32 141.7 121 64.5
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 5.9e-32 141.4 143 57.3
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 7.7e-32 141.0 104 71.2
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.0e-31 140.6 100 74.0
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.3e-31 140.2 101 72.3
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 1.3e-31 140.2 121 63.6
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.7e-31 139.8 113 67.3
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 2.2e-31 139.4 142 59.2
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 2.9e-31 139.0 95 75.8
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 1.5e-30 136.7 119 63.9
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.5e-30 136.7 104 68.3
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 1.5e-30 136.7 104 68.3
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 2.5e-30 136.0 147 58.5
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 2.5e-30 136.0 96 74.0
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 2.5e-30 136.0 149 54.4
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 4.2e-30 135.2 152 53.3
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 5.5e-30 134.8 93 68.8
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 5.5e-30 134.8 84 73.8
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 2.7e-29 132.5 97 70.1
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 6.1e-29 131.3 92 67.4
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 1.0e-28 130.6 151 51.0
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 2.3e-28 129.4 117 62.4
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 3.0e-28 129.0 99 69.7
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 3.0e-28 129.0 104 64.4
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 4.0e-28 128.6 142 52.8
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 5.2e-28 128.3 161 54.0
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 1.2e-27 127.1 101 68.3
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 2.0e-27 126.3 159 50.3
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.6e-27 125.9 101 64.4
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 2.6e-27 125.9 112 58.9
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 4.4e-27 125.2 201 41.3
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 9.8e-27 124.0 161 49.7
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 9.8e-27 124.0 120 56.7
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 9.8e-27 124.0 158 51.3
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 1.3e-26 123.6 154 51.3
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.3e-26 123.6 157 51.0
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.3e-26 123.6 157 51.0
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.3e-26 123.6 157 51.0
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 2.2e-26 122.9 102 64.7
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 4.8e-26 121.7 144 51.4
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.1e-25 120.6 162 45.7
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.4e-25 120.2 154 50.0
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.8e-25 119.8 144 51.4
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 3.1e-25 119.0 161 49.1
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 7.0e-25 117.9 98 63.3
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 7.7e-24 114.4 84 65.5
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 7.7e-24 114.4 160 47.5
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 2.2e-23 112.8 88 63.6
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 2.9e-23 112.5 147 49.0
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 3.2e-22 109.0 124 51.6
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 3.2e-22 109.0 98 60.2
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 2.8e-21 105.9 84 67.9
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 9.8e-19 97.4 169 44.4
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 6.3e-18 94.7 84 58.3
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.3e-18 94.4 84 58.3
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.4e-17 93.6 75 66.7
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 7.8e-16 87.8 126 45.2
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 3.8e-15 85.5 45 71.1
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 1.1e-14 84.0 113 49.6
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 3.6e-13 79.0 56 69.6
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.2e-11 73.9 90 47.8
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 9.8e-11 70.9 52 65.4
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 5.4e-09 65.1 36 86.1
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 9.2e-09 64.3 102 49.0
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 7.8e-08 61.2 79 54.4
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 1.0e-07 60.8 31 74.2
Cre03.g201050 Chlamydomonas reinhardtii HOM05D007375 ORTHO05D009293 1.7e-07 60.1 106 34.9


User provided reference genes

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