Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 5.7e-68 260.8 129 100.0
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 4.2e-55 218.0 125 83.2
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.6e-54 216.1 124 83.1
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 7.0e-50 200.7 127 76.4
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.0e-48 196.8 124 72.6
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.3e-48 196.4 124 72.6
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.9e-48 195.3 99 96.0
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 5.0e-48 194.5 127 72.4
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 1.9e-47 192.6 127 70.1
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 3.2e-47 191.8 127 71.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 3.2e-47 191.8 134 70.1
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 5.5e-47 191.0 129 72.1
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 5.5e-47 191.0 129 70.5
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 7.2e-47 190.7 127 70.9
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 7.2e-47 190.7 132 68.9
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 7.2e-47 190.7 121 71.1
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 9.4e-47 190.3 124 70.2
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.1e-46 189.1 125 70.4
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.7e-46 188.0 129 69.0
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.7e-46 188.0 129 69.0
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.1e-46 187.6 127 69.3
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 6.1e-46 187.6 127 69.3
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 8.0e-46 187.2 127 66.9
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 8.0e-46 187.2 122 68.0
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.4e-45 186.4 125 67.2
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.0e-45 185.3 127 68.5
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 5.2e-45 184.5 126 69.0
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 6.7e-45 184.1 127 64.6
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 6.7e-45 184.1 127 67.7
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 6.7e-45 184.1 129 68.2
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 6.7e-45 184.1 129 69.8
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 8.8e-45 183.7 127 66.1
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 8.8e-45 183.7 131 65.6
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 1.2e-44 183.3 127 66.1
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.5e-44 183.0 127 66.1
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.5e-44 183.0 124 66.1
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 2.6e-44 182.2 127 65.4
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.6e-44 182.2 129 68.2
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 3.3e-44 181.8 127 67.7
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 4.4e-44 181.4 127 64.6
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 4.4e-44 181.4 127 67.7
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 5.7e-44 181.0 122 68.9
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 9.7e-44 180.3 129 63.6
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 9.7e-44 180.3 127 64.6
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 9.7e-44 180.3 129 63.6
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 9.7e-44 180.3 129 63.6
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 9.7e-44 180.3 127 64.6
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.7e-44 180.3 129 65.1
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 1.3e-43 179.9 129 67.4
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.3e-43 179.9 129 65.1
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 1.3e-43 179.9 124 66.9
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.3e-43 179.9 127 63.8
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.7e-43 179.5 129 65.1
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.7e-43 179.5 122 68.9
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 2.2e-43 179.1 129 62.8
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.8e-43 178.7 129 64.3
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 2.8e-43 178.7 127 66.9
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 2.8e-43 178.7 105 75.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.7e-43 178.3 127 63.0
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 4.8e-43 177.9 129 65.9
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.8e-43 177.9 129 64.3
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 8.2e-43 177.2 130 63.8
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.4e-42 176.4 130 64.6
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 1.4e-42 176.4 125 68.0
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.4e-42 175.6 146 60.3
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 4.1e-42 174.9 129 63.6
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 4.1e-42 174.9 121 66.1
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 1.2e-41 173.3 172 53.5
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.2e-41 173.3 124 64.5
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 1.6e-41 172.9 128 63.3
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.6e-41 172.9 121 66.1
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.6e-41 172.9 124 62.9
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 2.0e-41 172.6 131 62.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 2.0e-41 172.6 110 71.8
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 4.5e-41 171.4 124 66.9
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 4.5e-41 171.4 123 64.2
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 5.9e-41 171.0 123 64.2
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 7.7e-41 170.6 125 61.6
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.7e-40 169.5 129 62.0
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 2.2e-40 169.1 120 63.3
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 3.8e-40 168.3 127 64.6
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 6.5e-40 167.5 120 63.3
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.9e-39 166.0 129 59.7
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 3.2e-39 165.2 129 59.7
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.2e-39 164.9 109 68.8
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 1.2e-38 163.3 132 63.6
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 2.1e-38 162.5 140 59.3
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.2e-36 156.8 119 56.3
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 2.2e-35 152.5 110 61.8
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 3.1e-34 148.7 108 64.8
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.1e-34 148.7 105 64.8
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 3.8e-32 141.7 122 54.9
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 8.6e-32 140.6 105 62.9
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 9.5e-31 137.1 127 58.3
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 1.2e-30 136.7 89 69.7
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.2e-30 136.7 122 54.9
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 1.6e-30 136.3 106 58.5
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.8e-30 135.6 103 55.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 8.8e-29 130.6 90 66.7
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.2e-28 130.2 134 48.5
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 2.8e-27 125.6 77 74.0
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.1e-26 123.6 107 50.5
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 2.4e-26 122.5 90 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 9.2e-26 120.6 121 46.3
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 9.2e-26 120.6 141 44.0
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 9.2e-26 120.6 97 63.9
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.2e-25 120.2 79 63.3
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 4.5e-25 118.2 132 44.7
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.0e-24 117.1 115 48.7
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.3e-24 116.7 132 43.2
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 6.8e-21 104.4 66 66.7
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 1.9e-15 86.3 135 42.2
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.5e-15 85.9 63 57.1
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 6.2e-14 81.3 129 39.5
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.4e-12 75.1 64 60.9
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 4.1e-10 68.6 43 67.4
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 5.4e-10 68.2 49 65.3
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 6.0e-09 64.7 39 69.2
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.3e-08 63.5 50 60.0


User provided reference genes

Program Settings