Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 6.7e-131 470.7 241 100.0
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.9e-53 213.4 235 49.8
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 3.4e-50 202.6 240 48.3
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 7.9e-47 191.4 240 46.2
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.2e-42 177.6 236 42.8
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 8.5e-41 171.4 248 41.9
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 3.9e-38 162.5 252 40.5
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 3.1e-35 152.9 242 38.0
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 3.2e-32 142.9 245 36.3
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 2.2e-28 130.2 244 35.2
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 2.8e-28 129.8 242 36.4
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 4.8e-28 129.0 248 33.9
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.5e-26 124.0 113 57.5
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.9e-26 122.1 267 35.6
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.3e-25 120.9 258 32.9
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.7e-25 120.6 250 30.0
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 2.2e-25 120.2 251 33.9
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.9e-25 119.8 250 30.0
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 3.8e-25 119.4 234 32.9
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.1e-24 117.9 255 32.2
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.4e-24 117.5 253 33.6
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.9e-24 117.1 274 32.8
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 1.9e-24 117.1 249 30.9
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.5e-24 116.7 257 32.3
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.2e-24 116.3 249 30.5
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 3.2e-24 116.3 242 31.8
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.2e-24 116.3 254 33.1
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.2e-23 114.4 250 31.2
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.6e-23 114.0 231 34.6
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 6.1e-23 112.1 249 29.7
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 7.9e-23 111.7 267 32.2
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 7.9e-23 111.7 255 31.8
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.4e-22 110.9 249 30.1
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.4e-22 110.9 243 31.7
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 2.3e-22 110.2 262 32.1
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.2e-22 109.0 249 29.3
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 5.2e-22 109.0 252 33.3
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 6.7e-22 108.6 255 31.8
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 8.8e-22 108.2 246 32.1
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.1e-21 107.8 233 30.0
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.1e-21 107.8 269 29.0
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 1.1e-21 107.8 243 31.7
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.5e-21 107.5 240 35.4
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.4e-21 105.9 270 30.7
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 5.7e-21 105.5 244 32.4
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 5.7e-21 105.5 245 33.1
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 7.4e-21 105.1 247 31.2
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.3e-20 104.4 249 28.9
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.2e-20 103.6 243 32.5
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.1e-19 101.3 250 30.0
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.1e-19 101.3 250 30.0
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 4.1e-19 99.4 234 32.1
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 1.2e-18 97.8 230 29.1
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 2.6e-18 96.7 259 30.1
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.7e-17 94.0 241 28.6
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 2.9e-17 93.2 100 44.0
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 3.8e-17 92.8 258 27.9
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 6.5e-17 92.0 241 29.9
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 6.5e-17 92.0 263 32.7
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 6.5e-17 92.0 221 28.5
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 1.1e-16 91.3 253 26.1
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.9e-16 90.5 101 46.5
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 3.2e-16 89.7 252 29.8
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 9.4e-16 88.2 259 29.3
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.1e-15 87.0 236 28.8
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 6.1e-15 85.5 223 29.6
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 6.1e-15 85.5 234 28.2
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 2.3e-14 83.6 233 29.6
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 5.2e-14 82.4 241 26.1
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 5.2e-14 82.4 243 27.2
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 6.7e-14 82.0 239 28.9
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 1.5e-13 80.9 230 26.5
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 2.0e-13 80.5 235 28.9
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 2.6e-13 80.1 254 26.0
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 3.3e-13 79.7 251 29.1
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 7.5e-13 78.6 100 42.0
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 1.3e-12 77.8 231 27.7
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.7e-12 77.4 258 25.2
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 2.2e-12 77.0 238 29.4
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 3.7e-12 76.3 245 29.0
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 8.2e-12 75.1 251 30.7
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 8.2e-12 75.1 235 31.1
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 8.2e-12 75.1 258 24.0
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-11 74.7 99 44.4
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 1.1e-11 74.7 241 27.0
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 9.1e-11 71.6 236 30.1
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 9.1e-11 71.6 249 27.3
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 4.5e-10 69.3 245 27.8
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 4.5e-10 69.3 72 47.2
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 1.0e-09 68.2 230 25.7
ECA233G5218 Erigeron canadensis HOM05D067851 ORTHO05D008131 3.8e-09 66.2 78 43.6
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.9e-08 63.9 237 25.7
ECA233G3888 Erigeron canadensis HOM05D067851 ORTHO05D008131 3.2e-08 63.2 81 40.7
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 9.4e-08 61.6 231 26.0
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.7e-07 59.3 55 45.5
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 6.1e-07 58.9 277 22.0
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 8.0e-07 58.5 242 24.8


User provided reference genes

Program Settings