Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0398291 Helianthus annuus HOM05D011081 ORTHO05D000592 5.0e-30 133.7 62 100.0
HanXRQChr04g0104851 Helianthus annuus HOM05D011081 ORTHO05D000592 5.6e-29 130.2 62 96.8
HanXRQChr17g0567791 Helianthus annuus HOM05D000750 ORTHO05D000592 1.2e-28 129.0 62 96.8
HanXRQChr15g0465241 Helianthus annuus HOM05D000750 ORTHO05D000592 1.4e-27 125.6 62 95.2
HanXRQChr09g0267321 Helianthus annuus HOM05D011081 ORTHO05D011662 5.2e-27 123.6 62 91.9
HanXRQChr10g0286251 Helianthus annuus HOM05D011081 ORTHO05D000592 2.6e-26 121.3 60 90.0
HanXRQChr14g0457831 Helianthus annuus HOM05D011081 ORTHO05D000592 1.7e-22 108.6 61 85.2
HanXRQChr08g0229411 Helianthus annuus HOM05D011081 ORTHO05D000592 2.8e-20 101.3 60 75.0
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.2e-16 87.8 56 66.1
Lsat_1_v5_gn_2_58940 Lactuca sativa HOM05D000539 ORTHO05D000592 9.2e-16 86.3 58 60.3
Lsat_1_v5_gn_4_12061 Lactuca sativa HOM05D000539 ORTHO05D000592 2.0e-15 85.1 59 57.6
Lsat_1_v5_gn_4_34001 Lactuca sativa HOM05D000539 ORTHO05D000592 2.7e-15 84.7 59 57.6
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.6e-13 77.0 56 51.8
ECA247G3504 Erigeron canadensis HOM05D011081 ORTHO05D000592 5.6e-13 77.0 56 53.6
Lsat_1_v5_gn_4_32420 Lactuca sativa HOM05D000539 ORTHO05D000592 1.2e-12 75.9 59 52.5
Lsat_1_v5_gn_2_7701 Lactuca sativa HOM05D000539 ORTHO05D000592 1.6e-12 75.5 59 55.9
ECA240G4466 Erigeron canadensis HOM05D000539 ORTHO05D000233 3.6e-12 74.3 56 51.8
HanXRQChr03g0072891 Helianthus annuus HOM05D011081 ORTHO05D000592 3.6e-12 74.3 37 86.5
HanXRQChr14g0441961 Helianthus annuus HOM05D000539 ORTHO05D000592 4.7e-12 73.9 42 69.0
HanXRQChr16g0519931 Helianthus annuus HOM05D011081 ORTHO05D000592 4.7e-12 73.9 42 69.0
ECA236G0195 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.1e-12 73.2 53 54.7
ECA232G3917 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-11 72.8 56 51.8
Lsat_1_v5_gn_5_85761 Lactuca sativa HOM05D011081 ORTHO05D000592 1.4e-11 72.4 59 54.2
ECA236G3736 Erigeron canadensis HOM05D000539 ORTHO05D000233 1.8e-11 72.0 56 51.8
Lsat_1_v5_gn_2_32460 Lactuca sativa HOM05D000539 ORTHO05D000592 1.8e-11 72.0 56 53.6
HanXRQChr09g0262931 Helianthus annuus HOM05D000539 ORTHO05D000592 2.3e-11 71.6 42 66.7
HanXRQChr10g0317561 Helianthus annuus HOM05D000539 ORTHO05D000592 2.3e-11 71.6 42 66.7
HanXRQChr09g0261101 Helianthus annuus HOM05D000539 ORTHO05D000592 4.0e-11 70.9 38 71.1
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.2e-11 70.5 56 50.0
Lsat_1_v5_gn_4_88020 Lactuca sativa HOM05D000539 ORTHO05D000592 6.8e-11 70.1 59 54.2
ECA240G0180 Erigeron canadensis HOM05D000539 ORTHO05D000233 4.9e-09 63.9 69 40.6
ECA232G2064 Erigeron canadensis HOM05D000539 ORTHO05D000592 8.3e-09 63.2 35 65.7
HanXRQChr16g0515391 Helianthus annuus HOM05D000539 ORTHO05D000592 4.1e-08 60.8 38 63.2
Lsat_1_v5_gn_7_70420 Lactuca sativa HOM05D000539 ORTHO05D000592 6.0e-07 57.0 54 46.3
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 2.3e-06 55.1 41 53.7
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 2.3e-06 55.1 41 53.7
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-06 53.5 41 53.7
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.1 41 51.2
RcHm_v2.0_Chr7g0232621 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.1 41 51.2


User provided reference genes

Program Settings