Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 8.6e-210 733.4 370 100.0
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 1.5e-134 483.4 286 82.5
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 3.2e-124 449.1 288 76.0
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 1.9e-108 396.7 311 57.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 5.2e-106 388.7 319 57.7
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.5e-105 387.1 312 57.4
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 2.6e-105 386.3 306 59.8
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 7.5e-105 384.8 324 58.0
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 6.3e-104 381.7 320 56.6
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 4.1e-103 379.0 313 56.2
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 7.0e-103 378.3 306 58.5
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 1.2e-102 377.5 306 55.2
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.6e-102 377.1 292 58.6
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 1.9e-100 370.2 307 55.4
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 2.5e-100 369.8 294 56.8
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.2e-99 367.5 294 59.2
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 2.1e-99 366.7 319 54.9
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 3.6e-99 365.9 318 55.3
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 8.0e-99 364.8 310 55.2
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.0e-98 364.4 314 56.4
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 4.0e-98 362.5 303 56.1
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 4.0e-98 362.5 318 53.8
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 5.2e-98 362.1 301 57.8
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 6.8e-98 361.7 319 53.0
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 1.2e-97 360.9 309 55.3
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.5e-97 360.5 293 59.0
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.5e-97 360.5 307 55.7
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 2.0e-97 360.1 291 57.0
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 5.7e-97 358.6 309 56.0
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.2e-96 356.7 322 51.9
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 3.7e-96 355.9 308 52.6
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 4.9e-96 355.5 308 54.5
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 6.3e-96 355.1 303 55.4
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 8.3e-96 354.8 303 55.8
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 8.3e-96 354.8 293 55.3
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.8e-95 353.6 287 57.5
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.4e-95 353.2 287 56.1
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.6e-94 350.5 306 53.3
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 2.0e-94 350.1 307 54.7
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.0e-94 350.1 313 53.7
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 2.0e-94 350.1 327 51.7
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 1.7e-93 347.1 287 55.4
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.3e-93 346.7 303 53.1
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 2.9e-93 346.3 289 55.4
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 3.8e-93 345.9 303 53.8
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 8.6e-93 344.7 278 56.8
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.6e-93 344.7 313 53.4
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 1.1e-92 344.4 291 57.0
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 5.6e-92 342.0 293 52.9
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.6e-92 342.0 308 53.9
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 7.2e-92 341.7 300 51.0
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 9.5e-92 341.3 287 55.4
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.5e-92 341.3 313 52.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 9.5e-92 341.3 300 53.0
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 2.8e-91 339.7 300 50.7
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.0e-90 337.8 287 55.4
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.4e-90 337.4 293 55.6
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 1.4e-90 337.4 278 56.1
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 2.0e-89 333.6 278 56.5
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 3.4e-89 332.8 293 52.9
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.7e-88 330.5 307 52.1
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.7e-88 330.5 287 53.3
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 2.2e-88 330.1 303 53.5
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.2e-87 326.2 303 51.5
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 3.5e-86 322.8 326 48.8
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 3.9e-85 319.3 298 51.7
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.5e-84 317.4 276 54.0
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 6.2e-83 312.0 302 48.3
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 2.3e-82 310.1 289 47.4
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 4.0e-82 309.3 284 52.5
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 5.2e-82 308.9 442 38.7
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.0e-81 307.0 320 46.9
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 2.6e-81 306.6 251 56.6
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.4e-81 305.8 405 40.7
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 2.2e-80 303.5 256 54.3
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 6.4e-80 302.0 237 59.9
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 4.1e-79 299.3 269 53.5
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 3.3e-76 289.7 326 45.1
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 2.8e-75 286.6 231 57.6
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.7e-75 285.8 234 56.4
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.2e-74 282.3 267 50.9
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 2.0e-73 280.4 314 42.4
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 2.6e-73 280.0 232 54.7
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 7.1e-71 271.9 248 51.2
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 7.8e-70 268.5 315 46.3
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.0e-69 268.1 336 43.5
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 3.9e-69 266.2 215 56.3
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.6e-67 259.6 199 60.8
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 6.8e-66 255.4 352 42.0
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 6.8e-66 255.4 282 44.0
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 4.4e-65 252.7 202 58.4
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 5.1e-61 239.2 305 40.3
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 6.2e-59 232.3 204 52.9
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.1e-47 194.9 200 50.0
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.2e-47 193.4 172 52.9
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 4.2e-47 193.0 200 49.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 3.0e-45 186.8 318 36.5
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 6.6e-45 185.7 274 39.4
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 2.8e-43 180.3 416 31.0
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 5.3e-42 176.0 141 56.7
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 1.2e-41 174.9 143 55.2
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 3.8e-40 169.9 168 47.0
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 4.2e-39 166.4 217 37.3
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.5e-36 157.9 122 54.9
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 3.3e-36 156.8 128 57.0
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.3e-35 154.8 310 30.3
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 7.9e-30 135.6 103 56.3
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.3e-27 128.3 96 54.2
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.4e-26 124.8 139 48.9
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 3.8e-24 116.7 84 58.3
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 6.5e-24 115.9 83 57.8
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 3.5e-22 110.2 257 29.6
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.3e-21 107.5 74 58.1
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 2.3e-21 107.5 338 24.6
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 2.8e-19 100.5 74 54.1
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.7e-16 91.3 294 26.9
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 1.4e-13 81.6 74 48.6
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 3.6e-06 57.0 54 48.1


User provided reference genes

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