Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0396991 Helianthus annuus HOM05D003745 ORTHO05D004215 1.9e-49 198.7 94 100.0
ECA233G0462 Erigeron canadensis HOM05D003745 ORTHO05D004215 7.9e-19 97.1 102 55.9
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 1.8e-15 85.9 97 51.5
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 2.6e-14 82.0 86 55.8
CSS0049961 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 1.3e-13 79.7 96 53.1
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 3.8e-13 78.2 97 52.6
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 3.8e-13 78.2 100 44.0
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 6.5e-13 77.4 83 54.2
CSS0006810 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 1.1e-12 76.6 88 54.5
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.4e-12 76.3 83 53.0
Sc12g0004160 Simmondsia chinensis HOM05D003745 ORTHO05D004215 1.4e-12 76.3 95 49.5
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 1.9e-12 75.9 97 52.6
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 3.2e-12 75.1 89 53.9
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 5.5e-12 74.3 100 46.0
Haze_23447 Corylus avellana HOM05D003745 ORTHO05D004215 5.5e-12 74.3 89 49.4
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 5.5e-12 74.3 85 52.9
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 5.5e-12 74.3 99 45.5
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 7.2e-12 73.9 64 64.1
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 7.2e-12 73.9 83 49.4
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 9.4e-12 73.6 84 52.4
CiPaw.10G005500 Carya illinoinensis HOM05D003745 ORTHO05D004215 9.4e-12 73.6 90 46.7
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 9.4e-12 73.6 99 48.5
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 9.4e-12 73.6 94 44.7
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 9.4e-12 73.6 94 47.9
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 9.4e-12 73.6 94 47.9
Potri.004G188200 Populus trichocarpa HOM05D003745 ORTHO05D004215 2.7e-11 72.0 102 45.1
Gohir.A07G107300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 3.6e-11 71.6 94 43.6
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 4.6e-11 71.2 96 42.7
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 6.1e-11 70.9 95 44.2
C01p34270 Brassica napus HOM05D003745 ORTHO05D004215 7.9e-11 70.5 92 45.7
BolC1t03395H Brassica oleracea HOM05D003745 ORTHO05D004215 7.9e-11 70.5 92 45.7
Gohir.D07G111300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 7.9e-11 70.5 94 41.5
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 7.9e-11 70.5 93 45.2
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 1.0e-10 70.1 92 42.4
Duzib168G0884 Durio zibethinus HOM05D003745 ORTHO05D004215 1.0e-10 70.1 91 44.0
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.0e-10 70.1 96 41.7
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.0e-10 70.1 94 41.5
MSTRG.17729 Avicennia marina HOM05D003745 ORTHO05D004215 1.4e-10 69.7 90 47.8
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.4e-10 69.7 101 45.5
COL.COLO4_19298 Corchorus olitorius HOM05D003745 ORTHO05D004215 1.4e-10 69.7 94 44.7
MD11G1157500 Malus domestica HOM05D003745 ORTHO05D004215 1.4e-10 69.7 100 45.0
Gorai.001G119600 Gossypium raimondii HOM05D003745 ORTHO05D004215 1.8e-10 69.3 94 44.7
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 1.8e-10 69.3 95 45.3
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 2.3e-10 68.9 88 47.7
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 2.3e-10 68.9 88 47.7
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 3.9e-10 68.2 85 51.8
AL5G22960 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 3.9e-10 68.2 92 45.7
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 3.9e-10 68.2 86 48.8
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 3.9e-10 68.2 90 47.8
Potri.009G148900 Populus trichocarpa HOM05D003745 ORTHO05D004215 3.9e-10 68.2 83 48.2
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 3.9e-10 68.2 100 44.0
TAR633G1338 Trochodendron aralioides HOM05D003745 ORTHO05D004215 3.9e-10 68.2 71 52.1
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 5.1e-10 67.8 77 49.4
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 6.7e-10 67.4 102 43.1
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 6.7e-10 67.4 102 43.1
QL01p013692 Quercus lobata HOM05D003745 ORTHO05D004215 6.7e-10 67.4 97 40.2
Aqoxy2G01397 Aquilegia oxysepala HOM05D003745 ORTHO05D004215 8.8e-10 67.0 97 39.2
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 1.1e-09 66.6 92 41.3
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 1.1e-09 66.6 92 41.3
Duzib150G0771 Durio zibethinus HOM05D003745 ORTHO05D004215 1.1e-09 66.6 99 41.4
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.1e-09 66.6 102 43.1
Sabra04G0127200 Salix brachista HOM05D003745 ORTHO05D004215 1.1e-09 66.6 102 43.1
TWI79G1201 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 1.1e-09 66.6 99 40.4
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 1.5e-09 66.2 88 54.5
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 1.5e-09 66.2 102 43.1
Phvul.005G127200 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 1.5e-09 66.2 92 42.4
TAR369G1123 Trochodendron aralioides HOM05D003745 ORTHO05D004215 1.5e-09 66.2 106 42.5
Sp5g16440 Schrenkiella parvula HOM05D003745 ORTHO05D004215 2.0e-09 65.9 92 42.4
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 2.0e-09 65.9 85 50.6
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 2.5e-09 65.5 88 50.0
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 2.5e-09 65.5 92 47.8
Lj3g0011252 Lotus japonicus HOM05D003745 ORTHO05D004215 2.5e-09 65.5 100 43.0
arahy.Tifrunner.gnm1.ann1.T88YYN Arachis hypogaea HOM05D003745 ORTHO05D004215 3.3e-09 65.1 87 48.3
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 4.3e-09 64.7 52 59.6
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 4.3e-09 64.7 103 44.7
Glyma.13G319200 Glycine max HOM05D003745 ORTHO05D004215 5.7e-09 64.3 89 46.1
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 5.7e-09 64.3 86 50.0
Hund00782 Selenicereus undatus HOM05D003745 ORTHO05D004215 5.7e-09 64.3 103 42.7
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 5.7e-09 64.3 37 75.7
CARHR151430 Cardamine hirsuta HOM05D003745 ORTHO05D004215 9.7e-09 63.5 92 43.5
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 1.3e-08 63.2 109 44.0
arahy.Tifrunner.gnm1.ann1.X8LT49 Arachis hypogaea HOM05D003745 ORTHO05D004215 1.7e-08 62.8 87 47.1
MSTRG.21061 Avicennia marina HOM05D003745 ORTHO05D004215 1.7e-08 62.8 99 43.4
BraA01t02615Z Brassica rapa HOM05D003745 ORTHO05D004215 1.7e-08 62.8 92 42.4
THA.LOC104799535 Tarenaya hassleriana HOM05D003745 ORTHO05D004215 1.7e-08 62.8 97 41.2
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 2.2e-08 62.4 103 43.7
Ciclev10013197m.g Citrus clementina HOM05D003745 ORTHO05D004215 2.8e-08 62.0 37 75.7
Duzib106G0171 Durio zibethinus HOM05D003745 ORTHO05D004215 3.7e-08 61.6 92 45.7
Gohir.A01G209100 Gossypium hirsutum HOM05D003745 ORTHO05D004215 3.7e-08 61.6 41 70.7
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 3.7e-08 61.6 107 43.0
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 3.7e-08 61.6 96 44.8
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 4.8e-08 61.2 79 49.4
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 6.3e-08 60.8 109 43.1
Sabra09G0117500 Salix brachista HOM05D003745 ORTHO05D004215 6.3e-08 60.8 37 70.3
vmacro07360 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 6.3e-08 60.8 80 43.8
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 8.2e-08 60.5 96 43.8
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 1.1e-07 60.1 91 41.8
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 1.1e-07 60.1 98 42.9
Rhsim01G0208400 Rhododendron simsii HOM05D003745 ORTHO05D004215 1.1e-07 60.1 71 47.9
Rhsim13G0105100 Rhododendron simsii HOM05D003745 ORTHO05D004215 1.1e-07 60.1 96 44.8
SalBow3G0501 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.1e-07 60.1 51 56.9
Cpa.g.sc5.75 Carica papaya HOM05D003745 ORTHO05D004215 1.4e-07 59.7 37 73.0
Cc06_g05290 Coffea canephora HOM05D003745 ORTHO05D004215 1.4e-07 59.7 87 41.4
Thhalv10002908m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 1.4e-07 59.7 35 71.4
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 1.4e-07 59.7 37 70.3
MD03G1134700 Malus domestica HOM05D003745 ORTHO05D004215 1.8e-07 59.3 91 40.7
Nitab4.5_0000663g0130 Nicotiana tabacum HOM05D003745 ORTHO05D004215 1.8e-07 59.3 87 42.5
EL10Ac9g21084 Beta vulgaris HOM05D003745 ORTHO05D004215 2.4e-07 58.9 88 44.3
MD14G1016200 Malus domestica HOM05D003745 ORTHO05D004215 2.4e-07 58.9 37 70.3
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 2.4e-07 58.9 52 61.5
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 2.4e-07 58.9 34 79.4
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 3.1e-07 58.5 94 43.6
RcHm_v2.0_Chr3g0472171 Rosa chinensis HOM05D003745 ORTHO05D004215 3.1e-07 58.5 52 57.7
Lalb_Chr14g0374201 Lupinus albus HOM05D003745 ORTHO05D004215 4.1e-07 58.2 87 41.4
MD12G1018200 Malus domestica HOM05D003745 ORTHO05D004215 4.1e-07 58.2 37 70.3
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 4.1e-07 58.2 111 40.5
SalBow3G0913 Salvia bowleyana HOM05D003745 ORTHO05D004215 4.1e-07 58.2 94 41.5
Sc12g0004180 Simmondsia chinensis HOM05D003745 ORTHO05D004215 4.1e-07 58.2 81 43.2
CANSAT80G1673 Cannabis sativa HOM05D003745 ORTHO05D004215 5.3e-07 57.8 39 71.8
FAN05G2107 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.3e-07 57.8 51 56.9
FAN05G2814 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.3e-07 57.8 51 56.9
Sopen09g003840 Solanum pennellii HOM05D003745 ORTHO05D004215 5.3e-07 57.8 74 47.3
TPR.G32386 Trifolium pratense HOM05D003745 ORTHO05D004215 5.3e-07 57.8 96 43.8
FvH4_6g17920 Fragaria vesca HOM05D003745 ORTHO05D004215 6.9e-07 57.4 51 56.9
FAN02G0871 Fragaria x ananassa HOM05D003745 ORTHO05D004215 6.9e-07 57.4 37 73.0
FAN14G5394 Fragaria x ananassa HOM05D003745 ORTHO05D004215 6.9e-07 57.4 51 56.9
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 6.9e-07 57.4 85 45.9
Prupe.7G116900 Prunus persica HOM05D003745 ORTHO05D004215 6.9e-07 57.4 37 70.3
Medtr2g084855 Medicago truncatula HOM05D003745 ORTHO05D004215 9.1e-07 57.0 94 40.4
Eucgr.A01541 Eucalyptus grandis HOM05D003745 ORTHO05D004215 1.5e-06 56.2 53 52.8
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 1.5e-06 56.2 94 39.4
Phvul.007G223101 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 1.5e-06 56.2 91 40.7
Solyc06g074540.4 Solanum lycopersicum HOM05D003745 ORTHO05D004215 1.5e-06 56.2 82 42.7
PGSC0003DMG400002682 Solanum tuberosum HOM05D003745 ORTHO05D004215 1.5e-06 56.2 75 46.7
Lj5g0022060 Lotus japonicus HOM05D003745 ORTHO05D004215 2.0e-06 55.8 99 38.4
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 2.0e-06 55.8 37 70.3
Sopen06g031010 Solanum pennellii HOM05D003745 ORTHO05D004215 2.0e-06 55.8 39 69.2
ECA240G4721 Erigeron canadensis HOM05D006380 ORTHO05D008400 2.6e-06 55.5 43 65.1
FAN09G1254 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.6e-06 55.5 59 49.2
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 2.6e-06 55.5 83 42.2
Eucgr.B03895 Eucalyptus grandis HOM05D003745 ORTHO05D004215 3.4e-06 55.1 94 38.3
Gohir.A04G066114 Gossypium hirsutum HOM05D003745 ORTHO05D004215 3.4e-06 55.1 86 36.0
Oeu001652.1 Olea europaea HOM05D003745 ORTHO05D004215 3.4e-06 55.1 52 57.7
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 3.4e-06 55.1 39 69.2
vmacro23105 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 3.4e-06 55.1 63 54.0
ATR0820G192 Amborella trichopoda HOM05D003745 ORTHO05D004215 4.5e-06 54.7 91 48.4
Oeu040536.1 Olea europaea HOM05D003745 ORTHO05D004215 4.5e-06 54.7 97 40.2
Glyma.13G151500 Glycine max HOM05D003745 ORTHO05D004215 5.9e-06 54.3 91 38.5
Oeu050182.1 Olea europaea HOM05D003745 ORTHO05D004215 5.9e-06 54.3 43 60.5
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 5.9e-06 54.3 39 66.7
A01p26850 Brassica napus HOM05D003745 ORTHO05D004215 7.7e-06 53.9 35 62.9


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