Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 6.4e-67 257.7 171 100.0
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 1.7e-40 169.9 120 80.0
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 6.9e-37 157.9 126 72.2
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 2.2e-27 126.3 143 53.8
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 3.8e-27 125.6 151 51.7
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 4.9e-27 125.2 141 53.9
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 6.4e-27 124.8 144 52.1
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 8.4e-27 124.4 143 54.5
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.1e-26 124.0 144 52.1
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 1.1e-26 124.0 142 53.5
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 1.9e-26 123.2 151 50.3
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 1.9e-26 123.2 150 52.0
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.9e-26 123.2 143 51.7
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.4e-26 122.9 151 51.7
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 2.4e-26 122.9 142 52.1
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 3.2e-26 122.5 141 52.5
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 3.2e-26 122.5 151 53.0
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 3.2e-26 122.5 144 52.1
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 3.2e-26 122.5 144 52.8
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 4.2e-26 122.1 145 51.7
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 4.2e-26 122.1 151 51.0
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 4.2e-26 122.1 144 52.1
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 4.2e-26 122.1 144 52.1
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 5.4e-26 121.7 141 51.8
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 7.1e-26 121.3 107 62.6
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 9.3e-26 120.9 107 62.6
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 9.3e-26 120.9 141 51.8
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.2e-25 120.6 149 50.3
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 1.2e-25 120.6 107 62.6
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.2e-25 120.6 143 51.7
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 1.2e-25 120.6 141 52.5
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 1.2e-25 120.6 107 62.6
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 1.6e-25 120.2 144 52.1
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.1e-25 119.8 137 54.0
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.1e-25 119.8 137 54.0
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.1e-25 119.8 137 54.0
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.7e-25 119.4 146 52.1
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 3.5e-25 119.0 142 51.4
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 3.5e-25 119.0 108 61.1
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 6.0e-25 118.2 145 51.0
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 6.0e-25 118.2 145 51.7
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 6.0e-25 118.2 141 51.8
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 6.0e-25 118.2 107 61.7
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 7.9e-25 117.9 105 61.9
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 7.9e-25 117.9 107 60.7
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 7.9e-25 117.9 143 52.4
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 7.9e-25 117.9 137 51.8
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 7.9e-25 117.9 108 60.2
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 7.9e-25 117.9 107 60.7
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 7.9e-25 117.9 108 61.1
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 1.0e-24 117.5 108 61.1
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 1.0e-24 117.5 110 60.0
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.0e-24 117.5 110 60.0
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.0e-24 117.5 110 60.0
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 1.3e-24 117.1 142 52.1
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 60.7
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 1.3e-24 117.1 110 59.1
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 1.3e-24 117.1 110 59.1
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 1.3e-24 117.1 110 59.1
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 1.3e-24 117.1 110 59.1
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.3e-24 117.1 108 60.2
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.3e-24 117.1 108 61.1
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.3e-24 117.1 108 61.1
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 60.7
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 60.7
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 1.3e-24 117.1 109 60.6
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 62.6
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 60.7
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 1.3e-24 117.1 107 60.7
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.8e-24 116.7 107 60.7
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.8e-24 116.7 142 51.4
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 1.8e-24 116.7 135 52.6
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 1.8e-24 116.7 107 60.7
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 1.8e-24 116.7 107 60.7
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 1.8e-24 116.7 104 62.5
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 1.8e-24 116.7 107 60.7
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.8e-24 116.7 106 62.3
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 1.8e-24 116.7 150 50.0
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.8e-24 116.7 107 60.7
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 1.8e-24 116.7 108 60.2
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 1.8e-24 116.7 139 52.5
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 2.3e-24 116.3 111 58.6
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 2.3e-24 116.3 146 50.0
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.3e-24 116.3 105 61.0
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 2.3e-24 116.3 148 50.7
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 2.3e-24 116.3 138 50.7
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 2.3e-24 116.3 138 53.6
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 3.0e-24 115.9 158 48.1
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 3.0e-24 115.9 101 63.4
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 3.0e-24 115.9 153 48.4
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 3.0e-24 115.9 108 60.2
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 3.0e-24 115.9 108 60.2
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 3.0e-24 115.9 108 60.2
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 3.0e-24 115.9 108 60.2
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 3.0e-24 115.9 152 51.3
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 3.9e-24 115.5 105 61.0
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 3.9e-24 115.5 107 59.8
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 3.9e-24 115.5 108 61.1
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 3.9e-24 115.5 107 59.8
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 3.9e-24 115.5 107 59.8
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 3.9e-24 115.5 108 60.2
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 3.9e-24 115.5 107 59.8
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 3.9e-24 115.5 107 59.8
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 5.1e-24 115.2 108 59.3
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 5.1e-24 115.2 152 48.7
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 5.1e-24 115.2 98 64.3
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 6.7e-24 114.8 111 58.6
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 6.7e-24 114.8 139 49.6
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 6.7e-24 114.8 149 49.7
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 6.7e-24 114.8 108 59.3
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 6.7e-24 114.8 107 58.9
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 8.7e-24 114.4 108 59.3
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 8.7e-24 114.4 150 49.3
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 8.7e-24 114.4 170 47.1
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 1.5e-23 113.6 111 57.7
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 1.5e-23 113.6 136 52.9
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 1.5e-23 113.6 108 59.3
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 1.5e-23 113.6 108 59.3
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 1.5e-23 113.6 107 60.7
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 1.5e-23 113.6 108 59.3
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.9e-23 113.2 101 63.4
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 2.5e-23 112.8 108 60.2
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 2.5e-23 112.8 108 59.3
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 3.3e-23 112.5 110 58.2
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 4.3e-23 112.1 108 57.4
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 4.3e-23 112.1 137 51.1
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 5.6e-23 111.7 111 56.8
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 5.6e-23 111.7 107 59.8
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 7.4e-23 111.3 142 49.3
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 2.8e-22 109.4 99 62.6
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 2.4e-21 106.3 109 55.0
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 3.1e-21 105.9 155 47.7
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 3.1e-21 105.9 99 61.6
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 2.6e-20 102.8 127 50.4
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 2.6e-20 102.8 109 51.4
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 4.2e-18 95.5 146 44.5
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 3.5e-17 92.4 120 51.7
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 4.6e-17 92.0 69 72.5
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 3.0e-16 89.4 128 43.8
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 3.0e-16 89.4 94 56.4
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 5.1e-16 88.6 135 43.7
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 7.4e-15 84.7 66 72.7
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 4.8e-14 82.0 61 72.1
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 1.1e-13 80.9 64 73.4
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 1.1e-13 80.9 64 73.4
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.4e-10 70.5 54 75.9
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 7.9e-09 64.7 51 70.6
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.8e-06 56.2 133 38.3


User provided reference genes

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