Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 3.7e-80 301.6 165 100.0
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.7e-61 239.6 162 80.9
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 2.1e-46 189.5 133 79.7
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.6e-41 172.6 140 67.9
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 3.4e-41 172.2 117 77.8
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 7.6e-41 171.0 117 76.9
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 7.6e-41 171.0 123 74.0
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 2.9e-40 169.1 144 67.4
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 6.4e-40 167.9 129 68.2
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 6.4e-40 167.9 133 69.9
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 1.1e-39 167.2 111 74.8
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.1e-39 167.2 157 62.4
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 3.2e-39 165.6 133 66.9
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 4.1e-39 165.2 125 67.2
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 7.1e-39 164.5 164 60.4
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.2e-38 163.7 146 63.0
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.6e-38 163.3 158 61.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 3.5e-38 162.2 115 72.2
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.6e-38 161.8 151 62.3
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 6.0e-38 161.4 146 63.0
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 6.0e-38 161.4 116 72.4
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 6.0e-38 161.4 116 72.4
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 7.8e-38 161.0 138 63.0
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 1.0e-37 160.6 163 58.9
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.3e-37 160.2 151 61.6
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.7e-37 159.8 163 58.9
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 2.3e-37 159.5 157 62.4
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.0e-37 159.1 175 56.6
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 5.1e-37 158.3 142 62.0
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 6.6e-37 157.9 169 57.4
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 8.6e-37 157.5 156 56.4
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.1e-36 157.1 146 58.9
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 1.5e-36 156.8 161 55.9
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 4.3e-36 155.2 115 67.8
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 4.3e-36 155.2 159 57.2
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 5.6e-36 154.8 162 58.0
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 9.6e-36 154.1 142 59.9
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 9.6e-36 154.1 167 55.1
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.2e-35 153.7 115 67.8
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.6e-35 153.3 128 64.1
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.6e-35 153.3 121 64.5
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.1e-35 152.9 150 58.7
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.1e-35 152.9 150 58.7
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.1e-34 150.6 115 67.8
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 1.1e-34 150.6 113 69.0
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 1.4e-34 150.2 107 70.1
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 1.4e-34 150.2 147 57.1
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 1.8e-34 149.8 147 57.1
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 1.8e-34 149.8 123 63.4
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 4.0e-34 148.7 107 71.0
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 5.2e-34 148.3 115 67.8
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 6.9e-34 147.9 133 60.9
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 8.9e-34 147.5 128 62.5
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 8.9e-34 147.5 128 62.5
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 8.9e-34 147.5 128 62.5
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.2e-33 147.1 121 63.6
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.5e-33 146.7 135 59.3
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.5e-33 146.7 116 64.7
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 2.6e-33 146.0 130 60.8
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 2.6e-33 146.0 128 61.7
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 4.4e-33 145.2 115 66.1
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 4.4e-33 145.2 115 66.1
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 4.4e-33 145.2 115 66.1
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 5.8e-33 144.8 112 67.0
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 5.8e-33 144.8 117 64.1
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 5.8e-33 144.8 112 67.0
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 5.8e-33 144.8 119 60.5
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 2.9e-32 142.5 133 57.9
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 3.8e-32 142.1 117 63.2
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 4.9e-32 141.7 101 69.3
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 8.4e-32 141.0 142 57.0
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 8.4e-32 141.0 142 57.0
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 8.4e-32 141.0 140 54.3
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 8.4e-32 141.0 107 64.5
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.4e-31 140.2 135 55.6
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 1.9e-31 139.8 107 64.5
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.1e-31 137.9 104 69.2
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.1e-31 137.9 131 56.5
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.1e-30 136.3 91 73.6
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 4.6e-30 135.2 162 50.6
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.7e-29 133.3 97 69.1
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 5.1e-29 131.7 104 66.3
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 5.1e-29 131.7 102 65.7
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.5e-28 130.2 116 61.2
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.5e-28 130.2 110 60.0
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.9e-28 129.8 164 49.4
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 2.5e-28 129.4 96 64.6
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 3.3e-28 129.0 149 53.7
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 4.3e-28 128.6 129 56.6
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 4.3e-28 128.6 129 56.6
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 5.6e-28 128.3 91 75.8
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 9.6e-28 127.5 142 55.6
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 1.8e-26 123.2 119 54.6
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 2.4e-26 122.9 105 62.9
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 4.0e-26 122.1 120 52.5
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.2e-25 120.6 130 50.8
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 2.0e-25 119.8 126 53.2
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 9.9e-25 117.5 104 59.6
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.3e-24 117.1 101 57.4
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.2e-24 116.3 130 53.1
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.1e-23 114.0 82 73.2
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 7.1e-23 111.3 143 47.6
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 7.1e-23 111.3 86 61.6
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.6e-22 110.2 142 43.7
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 6.0e-22 108.2 91 63.7
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 1.8e-21 106.7 102 54.9
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 9.6e-20 100.9 125 50.4
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.3e-19 100.5 81 65.4
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 8.1e-19 97.8 65 69.2
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 2.4e-18 96.3 126 46.0
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 9.0e-18 94.4 158 39.9
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 1.2e-17 94.0 103 42.7
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 4.5e-17 92.0 113 54.0
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.7e-16 90.1 129 45.0
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 3.8e-16 89.0 71 66.2
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 2.4e-15 86.3 100 52.0
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 9.3e-15 84.3 84 47.6
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 2.7e-14 82.8 105 53.3
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 4.6e-14 82.0 69 60.9
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.3e-13 80.5 82 51.2
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 7.4e-12 74.7 85 48.2
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 7.4e-12 74.7 85 48.2
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 2.1e-11 73.2 56 62.5
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 1.1e-10 70.9 67 52.2
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 2.0e-09 66.6 63 57.1
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 2.6e-09 66.2 63 57.1
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 1.3e-08 63.9 46 63.0
CSS0004409 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 4.2e-07 58.9 48 66.7
CSS0027281 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 4.2e-07 58.9 48 66.7
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 2.1e-06 56.6 58 55.2


User provided reference genes

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