Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0393851 Helianthus annuus HOM05D003484 ORTHO05D004152 3.7e-185 651.4 323 100.0
ECA246G2959 Erigeron canadensis HOM05D003484 ORTHO05D004152 1.7e-113 413.3 300 73.0
Lsat_1_v5_gn_4_151800 Lactuca sativa HOM05D003484 ORTHO05D004152 3.9e-110 402.1 300 71.3
HanXRQChr09g0261231 Helianthus annuus HOM05D003484 ORTHO05D004152 4.8e-108 395.2 300 70.0
ECA232G1269 Erigeron canadensis HOM05D003484 ORTHO05D004152 2.4e-107 392.9 300 70.0
Lj2A458T67 Lonicera japonica HOM05D003484 ORTHO05D004152 1.5e-104 383.6 300 67.3
Lj4A208T85 Lonicera japonica HOM05D003484 ORTHO05D004152 2.6e-101 372.9 300 66.0
CiPaw.07G051700 Carya illinoinensis HOM05D003484 ORTHO05D004152 7.5e-101 371.3 300 65.3
Cfa006912 Carpinus fangiana HOM05D003484 ORTHO05D004152 2.8e-100 369.4 300 65.7
Duzib264G1245 Durio zibethinus HOM05D003484 ORTHO05D004152 8.2e-100 367.9 301 66.1
DCAR_017312 Daucus carota HOM05D003484 ORTHO05D004152 1.8e-99 366.7 300 64.3
Dinv40029 Davidia involucrata HOM05D003484 ORTHO05D004152 2.4e-99 366.3 300 65.3
Duzib147G0644 Durio zibethinus HOM05D003484 ORTHO05D004152 4.1e-99 365.5 301 65.4
CSS0040658 Camellia sinensis var. sinensis HOM05D003484 ORTHO05D004152 5.3e-99 365.2 300 64.3
Haze_03844 Corylus avellana HOM05D003484 ORTHO05D004152 7.0e-99 364.8 329 62.0
Prupe.1G374100 Prunus persica HOM05D003484 ORTHO05D004152 2.0e-98 363.2 300 64.7
TWI09G1204 Tripterygium wilfordii HOM05D003484 ORTHO05D004152 3.5e-98 362.5 300 65.3
Actinidia26094 Actinidia chinensis HOM05D003484 ORTHO05D004152 4.5e-98 362.1 300 64.0
Sc26g0003390 Simmondsia chinensis HOM05D003484 ORTHO05D004152 5.9e-98 361.7 300 64.3
Actinidia29806 Actinidia chinensis HOM05D003484 ORTHO05D004152 1.0e-97 360.9 300 63.7
Ciclev10025538m.g Citrus clementina HOM05D003484 ORTHO05D004152 1.0e-97 360.9 300 63.7
Hund26891 Selenicereus undatus HOM05D003484 ORTHO05D004152 1.3e-97 360.5 300 63.3
Nn5g29711 Nelumbo nucifera HOM05D003484 ORTHO05D004152 1.7e-97 360.1 300 63.7
Thecc.01G027500 Theobroma cacao HOM05D003484 ORTHO05D004152 1.7e-97 360.1 300 65.0
COL.COLO4_22006 Corchorus olitorius HOM05D003484 ORTHO05D004152 2.2e-97 359.8 300 64.3
Sabra05G0097900 Salix brachista HOM05D003484 ORTHO05D004152 2.2e-97 359.8 300 64.0
FAN26G2370 Fragaria x ananassa HOM05D003484 ORTHO05D004152 2.9e-97 359.4 300 63.3
Gorai.003G012600 Gossypium raimondii HOM05D003484 ORTHO05D004152 2.9e-97 359.4 300 64.3
Potri.005G118800 Populus trichocarpa HOM05D003484 ORTHO05D004152 2.9e-97 359.4 300 63.7
QL02p009668 Quercus lobata HOM05D003484 ORTHO05D004152 2.9e-97 359.4 300 63.3
Manes.02G098300 Manihot esculenta HOM05D003484 ORTHO05D004152 3.8e-97 359.0 300 62.7
Atru.chr3.681 Acer truncatum HOM05D003484 ORTHO05D004152 5.0e-97 358.6 300 64.7
FAN27G3362 Fragaria x ananassa HOM05D003484 ORTHO05D004152 5.0e-97 358.6 300 63.3
PGR119G1492 Punica granatum HOM05D003484 ORTHO05D004152 5.0e-97 358.6 300 63.3
CAN.G358.31 Capsicum annuum HOM05D003484 ORTHO05D004152 8.5e-97 357.8 300 62.3
TAR381G1532 Trochodendron aralioides HOM05D003484 ORTHO05D004152 8.5e-97 357.8 300 64.0
GSVIVG01009775001 Vitis vinifera HOM05D003484 ORTHO05D004152 1.1e-96 357.5 300 62.0
arahy.Tifrunner.gnm1.ann1.2B58VD Arachis hypogaea HOM05D003484 ORTHO05D004152 1.9e-96 356.7 300 63.0
FAN15G3469 Fragaria x ananassa HOM05D003484 ORTHO05D004152 1.9e-96 356.7 300 62.3
QL06p035065 Quercus lobata HOM05D003484 ORTHO05D004152 1.9e-96 356.7 300 63.3
RcHm_v2.0_Chr6g0301701 Rosa chinensis HOM05D003484 ORTHO05D004152 1.9e-96 356.7 300 63.0
FAN20G2901 Fragaria x ananassa HOM05D003484 ORTHO05D004152 2.5e-96 356.3 300 63.0
Rhsim08G0122800 Rhododendron simsii HOM05D003484 ORTHO05D004152 2.5e-96 356.3 322 60.2
RcHm_v2.0_Chr2g0100451 Rosa chinensis HOM05D003484 ORTHO05D004152 3.2e-96 355.9 302 61.9
arahy.Tifrunner.gnm1.ann1.66HKGP Arachis hypogaea HOM05D003484 ORTHO05D004152 4.2e-96 355.5 300 62.7
PGSC0003DMG400003612 Solanum tuberosum HOM05D003484 ORTHO05D004152 4.2e-96 355.5 300 62.0
Atru.chr13.405 Acer truncatum HOM05D003484 ORTHO05D004152 9.4e-96 354.4 300 63.7
Manes.05G154900 Manihot esculenta HOM05D003484 ORTHO05D004152 9.4e-96 354.4 300 62.7
Rhsim07G0243200 Rhododendron simsii HOM05D003484 ORTHO05D004152 9.4e-96 354.4 300 62.7
Gohir.A02G167700 Gossypium hirsutum HOM05D003484 ORTHO05D004152 1.2e-95 354.0 300 64.0
MD15G1022300 Malus domestica HOM05D003484 ORTHO05D004152 1.2e-95 354.0 300 62.3
Cfa013879 Carpinus fangiana HOM05D003484 ORTHO05D004152 1.6e-95 353.6 300 62.0
FvH4_1g12520 Fragaria vesca HOM05D003484 ORTHO05D004152 1.6e-95 353.6 302 60.9
FAN19G1806 Fragaria x ananassa HOM05D003484 ORTHO05D004152 1.6e-95 353.6 302 60.9
Gohir.D03G012300 Gossypium hirsutum HOM05D003484 ORTHO05D004152 1.6e-95 353.6 300 63.7
Cpa.g.sc99.5 Carica papaya HOM05D003484 ORTHO05D004152 2.1e-95 353.2 300 62.7
Ciclev10001031m.g Citrus clementina HOM05D003484 ORTHO05D004152 2.1e-95 353.2 300 62.3
Gohir.A11G181400 Gossypium hirsutum HOM05D003484 ORTHO05D004152 2.1e-95 353.2 300 63.0
Gorai.007G199800 Gossypium raimondii HOM05D003484 ORTHO05D004152 2.1e-95 353.2 300 63.0
Lsat_1_v5_gn_3_74821 Lactuca sativa HOM05D003484 ORTHO05D004152 2.1e-95 353.2 300 63.0
CSS0005468 Camellia sinensis var. sinensis HOM05D003484 ORTHO05D004152 2.7e-95 352.8 300 62.0
Solyc02g084820.3 Solanum lycopersicum HOM05D003484 ORTHO05D004152 2.7e-95 352.8 300 61.7
Sopen02g029490 Solanum pennellii HOM05D003484 ORTHO05D004152 2.7e-95 352.8 300 61.7
Glyma.06G029300 Glycine max HOM05D003484 ORTHO05D004152 3.6e-95 352.4 300 62.3
Nitab4.5_0000723g0130 Nicotiana tabacum HOM05D003484 ORTHO05D004152 3.6e-95 352.4 300 62.0
vmacro17721 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 3.6e-95 352.4 335 58.2
FAN28G1582 Fragaria x ananassa HOM05D003484 ORTHO05D004152 4.7e-95 352.1 302 60.9
Eucgr.F01601 Eucalyptus grandis HOM05D003484 ORTHO05D004152 6.1e-95 351.7 300 62.3
FAN26G2451 Fragaria x ananassa HOM05D003484 ORTHO05D004152 1.4e-94 350.5 302 60.3
Gohir.D11G188000 Gossypium hirsutum HOM05D003484 ORTHO05D004152 1.4e-94 350.5 300 62.0
Nitab4.5_0003883g0010 Nicotiana tabacum HOM05D003484 ORTHO05D004152 1.4e-94 350.5 300 62.0
Prupe.7G161700 Prunus persica HOM05D003484 ORTHO05D004152 1.4e-94 350.5 300 62.3
COL.COLO4_26239 Corchorus olitorius HOM05D003484 ORTHO05D004152 1.8e-94 350.1 300 61.3
CANSAT01G1008 Cannabis sativa HOM05D003484 ORTHO05D004152 4.0e-94 349.0 300 62.0
Hma1.2p1_0775F.1_g216570 Hydrangea macrophylla HOM05D003484 ORTHO05D004152 4.0e-94 349.0 300 61.7
Glyma.17G253700 Glycine max HOM05D003484 ORTHO05D004152 5.2e-94 348.6 300 61.3
THA.LOC104813813 Tarenaya hassleriana HOM05D003484 ORTHO05D004152 5.2e-94 348.6 300 63.0
Thecc.08G033900 Theobroma cacao HOM05D003484 ORTHO05D004152 8.8e-94 347.8 300 62.3
AUR62014479 Chenopodium quinoa HOM05D003484 ORTHO05D004152 1.2e-93 347.4 300 61.7
Haze_22558 Corylus avellana HOM05D003484 ORTHO05D004152 1.2e-93 347.4 336 56.2
Aqoxy6G01198 Aquilegia oxysepala HOM05D003484 ORTHO05D004152 2.0e-93 346.7 300 61.3
MBI10_g00745_MAGBIO Magnolia biondii HOM05D003484 ORTHO05D004152 2.6e-93 346.3 300 61.0
Potri.002G031300 Populus trichocarpa HOM05D003484 ORTHO05D004152 2.6e-93 346.3 301 62.1
PGR083G0895 Punica granatum HOM05D003484 ORTHO05D004152 2.6e-93 346.3 300 60.7
CsaV3_7G032510 Cucumis sativus L. HOM05D003484 ORTHO05D006651 3.4e-93 345.9 300 60.0
Lj5g0005857 Lotus japonicus HOM05D003484 ORTHO05D004152 3.4e-93 345.9 300 60.7
Sed0018306 Sechium edule HOM05D003484 ORTHO05D004152 3.4e-93 345.9 300 60.0
ClCG09G002810 Citrullus lanatus HOM05D003484 ORTHO05D004152 4.4e-93 345.5 300 60.3
CSS0022746 Camellia sinensis var. sinensis HOM05D003484 ORTHO05D004152 5.7e-93 345.1 300 61.7
AUR62034522 Chenopodium quinoa HOM05D003484 ORTHO05D004152 5.7e-93 345.1 300 61.0
TWI73G0581 Tripterygium wilfordii HOM05D003484 ORTHO05D004152 5.7e-93 345.1 300 62.7
Thhalv10018489m.g Eutrema salsugineum HOM05D003484 ORTHO05D004152 1.3e-92 344.0 300 61.7
THA.LOC104809282 Tarenaya hassleriana HOM05D003484 ORTHO05D004152 1.3e-92 344.0 310 60.6
CANSAT25G0607 Cannabis sativa HOM05D003484 ORTHO05D004152 1.7e-92 343.6 300 60.0
Carub.0002s2229 Capsella rubella HOM05D003484 ORTHO05D004152 1.7e-92 343.6 300 61.7
FAN23G1432 Fragaria x ananassa HOM05D003484 ORTHO05D004152 1.7e-92 343.6 302 59.9
Psat5g015440 Pisum sativum HOM05D003484 ORTHO05D004152 1.7e-92 343.6 300 60.7
VMungo0647G0645 Vigna mungo HOM05D003484 ORTHO05D004152 1.7e-92 343.6 300 60.0
Duzib093G1138 Durio zibethinus HOM05D003484 ORTHO05D004152 2.2e-92 343.2 300 60.7
AL2G35370 Arabidopsis lyrata HOM05D003484 ORTHO05D004152 2.8e-92 342.8 300 61.0
CiPaw.08G060800 Carya illinoinensis HOM05D003484 ORTHO05D004152 2.8e-92 342.8 300 60.7
Lj1g0000425 Lotus japonicus HOM05D003484 ORTHO05D004152 2.8e-92 342.8 300 61.0
MELO3C023411.2 Cucumis melo HOM05D003484 ORTHO05D004152 4.8e-92 342.0 305 59.0
MD02G1139400 Malus domestica HOM05D003484 ORTHO05D004152 6.3e-92 341.7 300 61.0
AT1G75420 Arabidopsis thaliana HOM05D003484 ORTHO05D004152 8.3e-92 341.3 300 61.0
Ca_02077_v3 Cicer arietinum L. HOM05D003484 ORTHO05D004152 8.3e-92 341.3 300 60.3
Phvul.009G060600 Phaseolus vulgaris HOM05D003484 ORTHO05D004152 1.4e-91 340.5 300 60.0
CARHR068810 Cardamine hirsuta HOM05D003484 ORTHO05D004152 3.1e-91 339.3 300 60.0
Aa31LG4G5630 Aethionema arabicum HOM05D003484 ORTHO05D004152 4.1e-91 339.0 300 60.3
Cc10_g02440 Coffea canephora HOM05D003484 ORTHO05D004152 4.1e-91 339.0 299 59.5
GSVIVG01018875001 Vitis vinifera HOM05D003484 ORTHO05D004152 7.0e-91 338.2 302 59.6
Sabra02G0025100 Salix brachista HOM05D003484 ORTHO05D004152 9.1e-91 337.8 301 61.1
TPR.G12425 Trifolium pratense HOM05D003484 ORTHO05D004152 1.2e-90 337.4 300 59.7
Cc07_g10050 Coffea canephora HOM05D003484 ORTHO05D004152 1.6e-90 337.0 300 61.7
MD15G1252500 Malus domestica HOM05D003484 ORTHO05D004152 1.6e-90 337.0 300 59.7
VMungo1309G0336 Vigna mungo HOM05D003484 ORTHO05D004152 2.0e-90 336.7 300 60.3
Sp5g30560 Schrenkiella parvula HOM05D003484 ORTHO05D004152 7.7e-90 334.7 300 60.7
Gohir.D05G193800 Gossypium hirsutum HOM05D003484 ORTHO05D004152 1.7e-89 333.6 300 59.3
Gorai.009G198800 Gossypium raimondii HOM05D003484 ORTHO05D004152 1.7e-89 333.6 300 59.3
SalBow1G0941 Salvia bowleyana HOM05D003484 ORTHO05D004152 5.0e-89 332.0 300 58.0
Aa31LG7G4290 Aethionema arabicum HOM05D003484 ORTHO05D004152 1.9e-88 330.1 300 59.0
Medtr3g112280 Medicago truncatula HOM05D003484 ORTHO05D004152 7.2e-88 328.2 300 59.0
PSO210G1712 Papaver somniferum HOM05D003484 ORTHO05D004152 9.5e-88 327.8 298 58.4
Gohir.A05G190400 Gossypium hirsutum HOM05D003484 ORTHO05D004152 2.1e-87 326.6 300 58.7
SEGI_00807 Sequoiadendron giganteum HOM05D003484 ORTHO05D004152 2.1e-87 326.6 300 55.7
AL1G32430 Arabidopsis lyrata HOM05D003484 ORTHO05D004152 2.8e-87 326.2 301 59.8
PSO447G0175 Papaver somniferum HOM05D003484 ORTHO05D004152 2.8e-87 326.2 298 58.1
EL10Ac1g00611 Beta vulgaris HOM05D003484 ORTHO05D004152 4.7e-87 325.5 335 53.7
Thhalv10007509m.g Eutrema salsugineum HOM05D003484 ORTHO05D004152 6.1e-87 325.1 301 59.5
Lalb_Chr14g0369551 Lupinus albus HOM05D003484 ORTHO05D004152 6.1e-87 325.1 300 57.3
ATR1154G013 Amborella trichopoda HOM05D003484 ORTHO05D004152 8.0e-87 324.7 341 54.3
AT1G19710 Arabidopsis thaliana HOM05D003484 ORTHO05D004152 1.0e-86 324.3 301 59.5
Carub.0001s1925 Capsella rubella HOM05D003484 ORTHO05D004152 1.4e-86 323.9 301 59.5
BcaB07g31984 Brassica carinata HOM05D003484 ORTHO05D004152 4.0e-86 322.4 301 58.1
Sed0000171 Sechium edule HOM05D003484 ORTHO05D004152 5.2e-86 322.0 301 57.8
Migut.N00471 Erythranthe guttata HOM05D003484 ORTHO05D004152 1.2e-85 320.9 300 56.3
HPP92_016115 Vanilla planifolia HOM05D003484 ORTHO05D004152 1.2e-85 320.9 300 57.3
SGA_v2.0_scaffold326G48736 Striga asiatica HOM05D003484 ORTHO05D004152 2.6e-85 319.7 300 57.0
PSO675G7417 Papaver somniferum HOM05D003484 ORTHO05D004152 3.4e-85 319.3 300 57.3
BolC5t30522H Brassica oleracea HOM05D003484 ORTHO05D004152 5.7e-85 318.5 301 57.5
C05p18150 Brassica napus HOM05D003484 ORTHO05D004152 7.5e-85 318.2 301 57.5
BraA06t24693Z Brassica rapa HOM05D003484 ORTHO05D004152 7.5e-85 318.2 301 57.1
Lalb_Chr11g0062181 Lupinus albus HOM05D003484 ORTHO05D004152 7.5e-85 318.2 301 57.5
MSTRG.24276 Avicennia marina HOM05D003484 ORTHO05D004152 9.8e-85 317.8 300 55.7
Os01g0262600 Oryza sativa ssp. japonica HOM05D003484 ORTHO05D004152 1.3e-84 317.4 300 55.0
A06p15830 Brassica napus HOM05D003484 ORTHO05D004152 1.7e-84 317.0 301 57.1
CSS0044139 Camellia sinensis var. sinensis HOM05D003484 ORTHO05D004152 2.8e-84 316.2 303 58.7
CARHR020230 Cardamine hirsuta HOM05D003484 ORTHO05D004152 2.8e-84 316.2 300 58.0
PSO541G2144 Papaver somniferum HOM05D003484 ORTHO05D004152 2.8e-84 316.2 300 57.3
Peaxi162Scf00418g00928 Petunia axillaris HOM05D003484 ORTHO05D004152 3.7e-84 315.8 241 68.5
unitig_26.g10035 Utricularia gibba HOM05D003484 ORTHO05D004152 4.9e-84 315.5 300 54.3
FvH4_2g39300 Fragaria vesca HOM05D003484 ORTHO05D004152 1.2e-77 294.3 300 55.3
vmacro22965 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 4.4e-69 265.8 239 61.5
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 2.3e-65 253.4 273 52.7
Zm00001eb128410 Zea mays HOM05D003484 ORTHO05D004152 1.9e-64 250.4 300 47.3
vmacro17718 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 1.6e-63 247.3 302 51.0
CARHR034620 Cardamine hirsuta HOM05D003484 ORTHO05D004152 1.1e-62 244.6 273 52.0
SMO140G0050 Selaginella moellendorffii HOM05D003484 ORTHO05D004152 1.3e-60 237.7 302 44.4
Sp1g17540 Schrenkiella parvula HOM05D003484 ORTHO05D004152 1.7e-57 227.3 238 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3091 Anthoceros agrestis HOM05D003484 ORTHO05D004152 2.3e-57 226.9 301 43.2
Glyma.14G070902 Glycine max HOM05D003484 ORTHO05D004152 3.0e-57 226.5 193 62.7
Glyma.04G029333 Glycine max HOM05D003484 ORTHO05D004152 6.6e-57 225.3 137 81.8
Dinv39458 Davidia involucrata HOM05D003484 ORTHO05D004152 1.5e-53 214.2 213 54.9
Pp3c9_7950 Physcomitrium patens HOM05D003484 ORTHO05D004152 1.9e-51 207.2 304 39.8
Actinidia19218 Actinidia chinensis HOM05D003484 ORTHO05D004152 9.3e-43 178.3 300 39.0
Hund30417 Selenicereus undatus HOM05D003484 ORTHO05D004152 1.2e-42 177.9 158 58.9
vmacro17803 Vaccinium macrocarpon HOM05D003484 ORTHO05D004152 1.3e-39 167.9 111 75.7
Ah.14g085980 Amaranthus hybridus HOM05D003484 ORTHO05D004152 1.4e-38 164.5 239 42.7
Hund30416 Selenicereus undatus HOM05D003484 ORTHO05D004152 4.6e-34 149.4 87 85.1
Glyma.04G029267 Glycine max HOM05D003484 ORTHO05D004152 1.9e-32 144.1 124 57.3
SHI08628 Sapria himalayana HOM05D003484 ORTHO05D000014 3.3e-32 143.3 128 55.5
Ah.14g085970 Amaranthus hybridus HOM05D003484 ORTHO05D004152 3.1e-30 136.7 91 73.6
Rhsim08G0122700 Rhododendron simsii HOM05D003484 ORTHO05D004152 5.3e-22 109.4 207 37.2
CARHR218780 Cardamine hirsuta HOM05D003484 ORTHO05D004152 9.0e-22 108.6 113 50.4
QL04p030830 Quercus lobata HOM05D002629 ORTHO05D021498 2.9e-12 77.0 53 67.9
Medtr3g112270 Medicago truncatula HOM05D003484 ORTHO05D004152 5.1e-09 66.2 84 46.4
HanXRQChr03g0066781 Helianthus annuus HOM05D003484 ORTHO05D004152 3.3e-08 63.5 36 77.8
Actinidia35614 Actinidia chinensis HOM05D003484 ORTHO05D004152 4.1e-06 56.6 36 69.4
SMO140G0011 Selaginella moellendorffii HOM05D003484 ORTHO05D004152 6.9e-06 55.8 168 28.6


User provided reference genes

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