Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0392481 Helianthus annuus HOM05D001440 ORTHO05D036356 9.6e-74 280.0 137 100.0
HanXRQChr16g0516471 Helianthus annuus HOM05D001440 ORTHO05D036356 1.9e-61 239.2 127 91.3
HanXRQChr01g0004191 Helianthus annuus HOM05D001440 ORTHO05D036356 3.9e-59 231.5 114 97.4
HanXRQChr01g0026731 Helianthus annuus HOM05D002156 ORTHO05D029280 4.1e-08 62.0 71 47.9
Peaxi162Scf00522g00115 Petunia axillaris HOM05D001440 ORTHO05D001697 2.0e-07 59.7 49 53.1
Thecc.09G092700 Theobroma cacao HOM05D001440 ORTHO05D001697 2.7e-07 59.3 45 55.6
FAN23G1943 Fragaria x ananassa HOM05D001440 ORTHO05D001697 5.9e-07 58.2 33 72.7
Solyc07g021700.3 Solanum lycopersicum HOM05D001440 ORTHO05D001697 5.9e-07 58.2 33 69.7
PGSC0003DMG400003248 Solanum tuberosum HOM05D001440 ORTHO05D001697 5.9e-07 58.2 33 69.7
MD15G1204100 Malus domestica HOM05D001440 ORTHO05D001697 7.7e-07 57.8 33 72.7
Prupe.7G213100 Prunus persica HOM05D001440 ORTHO05D001697 7.7e-07 57.8 33 72.7
Solyc05g026360.4 Solanum lycopersicum HOM05D001440 ORTHO05D001697 7.7e-07 57.8 49 53.1
Sopen05g022670 Solanum pennellii HOM05D001440 ORTHO05D001697 1.0e-06 57.4 49 53.1
Duzib168G2351 Durio zibethinus HOM05D001440 ORTHO05D001697 1.3e-06 57.0 45 55.6
Gohir.A07G010300 Gossypium hirsutum HOM05D001440 ORTHO05D001697 1.3e-06 57.0 45 55.6
Gohir.D07G010600 Gossypium hirsutum HOM05D001440 ORTHO05D001697 1.3e-06 57.0 45 55.6
Gorai.001G011000 Gossypium raimondii HOM05D001440 ORTHO05D001697 1.3e-06 57.0 45 55.6
HanXRQChr10g0319141 Helianthus annuus HOM05D001440 ORTHO05D001697 1.3e-06 57.0 33 78.8
FvH4_1g07090 Fragaria vesca HOM05D001440 ORTHO05D001697 1.7e-06 56.6 33 69.7
FAN19G0923 Fragaria x ananassa HOM05D001440 ORTHO05D001697 1.7e-06 56.6 33 69.7
FAN26G1018 Fragaria x ananassa HOM05D001440 ORTHO05D001697 1.7e-06 56.6 33 69.7
FAN26G3029 Fragaria x ananassa HOM05D001440 ORTHO05D001697 1.7e-06 56.6 33 69.7
RcHm_v2.0_Chr2g0092981 Rosa chinensis HOM05D001440 ORTHO05D001697 1.7e-06 56.6 33 69.7
HanXRQChr03g0060551 Helianthus annuus HOM05D001440 ORTHO05D001697 2.3e-06 56.2 33 69.7
CAN.G57.30 Capsicum annuum HOM05D001440 ORTHO05D001697 2.9e-06 55.8 33 66.7
Gorai.010G081500 Gossypium raimondii HOM05D001440 ORTHO05D001697 2.9e-06 55.8 45 55.6
Lj2g0026976 Lotus japonicus HOM05D001440 ORTHO05D001697 2.9e-06 55.8 42 57.1
Gohir.D06G069900 Gossypium hirsutum HOM05D001440 ORTHO05D001697 3.8e-06 55.5 45 55.6
HanXRQChr12g0355381 Helianthus annuus HOM05D001440 ORTHO05D001697 3.8e-06 55.5 33 72.7
Lsat_1_v5_gn_7_37821 Lactuca sativa HOM05D001440 ORTHO05D001697 5.0e-06 55.1 33 69.7
Lj4g0012866 Lotus japonicus HOM05D001440 ORTHO05D001697 6.6e-06 54.7 37 62.2
FAN28G0274 Fragaria x ananassa HOM05D001440 ORTHO05D001697 8.6e-06 54.3 33 66.7
Gohir.A06G071200 Gossypium hirsutum HOM05D001440 ORTHO05D001697 8.6e-06 54.3 45 53.3
Sopen07g011560 Solanum pennellii HOM05D001440 ORTHO05D001697 8.6e-06 54.3 33 66.7


User provided reference genes

Program Settings