Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 5.4e-116 421.0 214 100.0
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-62 243.8 209 61.2
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 1.4e-47 193.7 194 55.7
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.9e-46 188.3 186 58.6
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 9.2e-31 137.9 131 54.2
Lsat_1_v5_gn_1_2780 Lactuca sativa HOM05D004728 ORTHO05D002375 2.3e-29 133.3 215 41.4
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 8.3e-24 114.8 193 38.9
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 6.8e-18 95.1 150 38.7
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 1.3e-16 90.9 128 39.1
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 1.7e-16 90.5 135 39.3
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 4.9e-16 89.0 163 33.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 5.4e-15 85.5 157 32.5
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.1e-13 79.0 123 33.3
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 5.1e-13 79.0 123 33.3
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 9.6e-12 74.7 139 30.2
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-11 74.3 125 35.2
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 3.6e-11 72.8 127 33.9
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 4.7e-11 72.4 161 28.6
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 6.2e-11 72.0 138 31.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 8.1e-11 71.6 151 31.1
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 8.1e-11 71.6 115 37.4
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.0e-10 69.3 126 31.0
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 6.9e-10 68.6 125 32.0
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 6.9e-10 68.6 168 29.8
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.9e-10 68.2 174 27.6
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-09 67.8 174 27.6
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 1.2e-09 67.8 123 31.7
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.0e-09 67.0 125 34.4
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.4e-09 66.2 141 29.1
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 3.4e-09 66.2 174 28.7
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 5.8e-09 65.5 180 27.2
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 5.8e-09 65.5 197 29.9
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 7.6e-09 65.1 117 32.5
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.6e-09 65.1 117 32.5
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 9.9e-09 64.7 143 29.4
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 9.9e-09 64.7 128 32.8
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 9.9e-09 64.7 134 28.4
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.3e-08 64.3 179 30.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.7e-08 63.9 129 31.8
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.8e-08 62.8 144 29.9
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.8e-08 62.8 118 30.5
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 4.9e-08 62.4 113 30.1
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 4.9e-08 62.4 192 27.6
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.4e-08 62.0 204 26.5
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 8.4e-08 61.6 141 32.6
PSO675G0090 Papaver somniferum HOM05D015253 ORTHO05D023059 8.4e-08 61.6 105 31.4
PSO675G4345 Papaver somniferum HOM05D015253 ORTHO05D023059 8.4e-08 61.6 122 32.0
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 1.1e-07 61.2 157 30.6
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.1e-07 61.2 106 31.1
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.1e-07 61.2 141 27.7
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.1e-07 61.2 118 34.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.4e-07 60.8 127 31.5
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.9e-07 60.5 195 28.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.9e-07 60.5 121 30.6
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.9e-07 60.5 121 28.9
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 1.9e-07 60.5 121 28.9
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.9e-07 60.5 164 26.8
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.9e-07 60.5 195 27.2
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.2e-07 59.7 122 29.5
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 3.2e-07 59.7 119 33.6
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.2e-07 59.3 141 27.0
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 5.4e-07 58.9 103 31.1
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.4e-07 58.9 112 31.2
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.4e-07 58.9 133 30.1
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 5.4e-07 58.9 162 26.5
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 7.1e-07 58.5 116 31.9
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.2e-06 57.8 167 24.0
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 1.2e-06 57.8 107 31.8
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.2e-06 57.8 170 27.6
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 1.2e-06 57.8 114 36.8
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 1.6e-06 57.4 112 28.6
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.6e-06 57.4 106 28.3
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.1e-06 57.0 133 29.3
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.1e-06 57.0 107 32.7
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 2.7e-06 56.6 114 36.0
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.5e-06 56.2 139 28.8
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 4.6e-06 55.8 134 29.1
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 4.6e-06 55.8 116 26.7
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 4.6e-06 55.8 114 32.5
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.0e-06 55.5 122 30.3
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 6.0e-06 55.5 133 29.3
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 6.0e-06 55.5 135 28.9
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.8e-06 55.1 124 26.6
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 7.8e-06 55.1 140 27.9
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 7.8e-06 55.1 128 32.0


User provided reference genes

Program Settings