Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0391791 Helianthus annuus HOM05D004274 ORTHO05D004980 3.0e-108 395.2 202 100.0
Lsat_1_v5_gn_9_15480 Lactuca sativa HOM05D004274 ORTHO05D004980 5.9e-80 301.2 202 79.7
ECA247G3741 Erigeron canadensis HOM05D004274 ORTHO05D004980 1.2e-75 287.0 201 77.1
Lalb_Chr15g0085561 Lupinus albus HOM05D004274 ORTHO05D004980 1.4e-68 263.5 194 69.6
Peaxi162Scf00293g00719 Petunia axillaris HOM05D004274 ORTHO05D004980 6.4e-66 254.6 164 77.4
TPR.G13822 Trifolium pratense HOM05D004274 ORTHO05D004980 8.3e-66 254.2 180 72.8
FAN16G2313 Fragaria x ananassa HOM05D004274 ORTHO05D004980 3.2e-65 252.3 174 73.0
Cc01_g15600 Coffea canephora HOM05D004274 ORTHO05D004980 2.0e-64 249.6 184 71.7
FAN21G2911 Fragaria x ananassa HOM05D004274 ORTHO05D004980 3.5e-64 248.8 168 74.4
CANSAT54G0105 Cannabis sativa HOM05D004274 ORTHO05D004980 6.0e-64 248.1 168 72.6
Glyma.18G049100 Glycine max HOM05D004274 ORTHO05D004980 6.0e-64 248.1 169 74.0
Nitab4.5_0002399g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 1.7e-63 246.5 192 68.8
VMungo0540G0713 Vigna mungo HOM05D004274 ORTHO05D004980 3.0e-63 245.7 187 68.4
PGSC0003DMG400015127 Solanum tuberosum HOM05D004274 ORTHO05D004980 3.9e-63 245.4 164 75.0
Oeu023904.1 Olea europaea HOM05D004274 ORTHO05D004980 5.0e-63 245.0 177 69.5
Medtr3g062940 Medicago truncatula HOM05D004274 ORTHO05D004980 6.6e-63 244.6 172 73.3
Ca_15091_v3 Cicer arietinum L. HOM05D004274 ORTHO05D004980 8.6e-63 244.2 170 74.7
Lj2C1107G8 Lonicera japonica HOM05D004274 ORTHO05D004980 1.5e-62 243.4 165 77.0
Manes.02G210080 Manihot esculenta HOM05D004274 ORTHO05D004980 1.9e-62 243.0 169 71.0
Nitab4.5_0000539g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 4.3e-62 241.9 191 68.1
Sed0009740 Sechium edule HOM05D004274 ORTHO05D004980 5.6e-62 241.5 178 69.7
Lj6g0024729 Lotus japonicus HOM05D004274 ORTHO05D004980 2.8e-61 239.2 164 74.4
Rhsim01G0245500 Rhododendron simsii HOM05D004274 ORTHO05D004980 2.8e-61 239.2 197 66.5
arahy.Tifrunner.gnm1.ann1.P847CR Arachis hypogaea HOM05D004274 ORTHO05D004980 4.7e-61 238.4 179 68.2
arahy.Tifrunner.gnm1.ann1.URW4K1 Arachis hypogaea HOM05D004274 ORTHO05D004980 4.7e-61 238.4 179 68.7
THA.LOC104823773 Tarenaya hassleriana HOM05D004274 ORTHO05D004980 1.1e-60 237.3 160 73.8
PSO339G1940 Papaver somniferum HOM05D004274 ORTHO05D004980 1.8e-60 236.5 190 66.3
PSO384G1823 Papaver somniferum HOM05D004274 ORTHO05D004980 2.3e-60 236.1 184 68.5
Migut.N00703 Erythranthe guttata HOM05D004274 ORTHO05D004980 4.0e-60 235.3 166 72.9
Hma1.2p1_0161F.1_g071960 Hydrangea macrophylla HOM05D004274 ORTHO05D004980 8.9e-60 234.2 188 68.6
Duzib168G2323 Durio zibethinus HOM05D004274 ORTHO05D004980 1.5e-59 233.4 165 70.9
PGR083G2809 Punica granatum HOM05D004274 ORTHO05D004980 2.0e-59 233.0 181 64.6
Oeu020453.2 Olea europaea HOM05D004274 ORTHO05D004980 7.5e-59 231.1 175 68.0
AT5G58240 Arabidopsis thaliana HOM05D004274 ORTHO05D004980 1.3e-58 230.3 174 67.2
Gohir.D10G148100 Gossypium hirsutum HOM05D004274 ORTHO05D004980 2.2e-58 229.6 169 68.0
Sed0016747 Sechium edule HOM05D004274 ORTHO05D004980 2.2e-58 229.6 186 64.5
AUR62017620 Chenopodium quinoa HOM05D004274 ORTHO05D004980 2.9e-58 229.2 174 69.5
GSVIVG01024520001 Vitis vinifera HOM05D004274 ORTHO05D004980 4.9e-58 228.4 181 65.7
Sp6g19900 Schrenkiella parvula HOM05D004274 ORTHO05D004980 6.4e-58 228.0 164 70.1
Thecc.09G366500 Theobroma cacao HOM05D004274 ORTHO05D004980 6.4e-58 228.0 174 67.2
Os11g0120600 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.1e-57 227.3 167 70.7
BraA10t43627Z Brassica rapa HOM05D004274 ORTHO05D004980 1.4e-57 226.9 176 65.9
AUR62015168 Chenopodium quinoa HOM05D004274 ORTHO05D004980 1.9e-57 226.5 172 67.4
BcaB01g04543 Brassica carinata HOM05D004274 ORTHO05D004980 2.4e-57 226.1 159 71.1
Haze_24498 Corylus avellana HOM05D004274 ORTHO05D004980 3.2e-57 225.7 169 67.5
CiPaw.13G059500 Carya illinoinensis HOM05D004274 ORTHO05D004980 4.1e-57 225.3 192 61.5
A10p15980 Brassica napus HOM05D004274 ORTHO05D004980 5.4e-57 224.9 159 70.4
C09p50090 Brassica napus HOM05D004274 ORTHO05D004980 5.4e-57 224.9 159 70.4
BolC9t57861H Brassica oleracea HOM05D004274 ORTHO05D004980 5.4e-57 224.9 159 70.4
Thhalv10014808m.g Eutrema salsugineum HOM05D004274 ORTHO05D004980 5.4e-57 224.9 175 66.9
Gohir.A10G118575 Gossypium hirsutum HOM05D004274 ORTHO05D004980 1.2e-56 223.8 169 66.9
BcaC04g19900 Brassica carinata HOM05D004274 ORTHO05D004980 2.1e-56 223.0 197 60.4
CsaV3_3G000810 Cucumis sativus L. HOM05D004274 ORTHO05D004980 7.8e-56 221.1 203 57.6
Aa31LG11G30 Aethionema arabicum HOM05D004274 ORTHO05D004980 1.0e-55 220.7 172 68.6
MBI03_g31633_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 1.0e-55 220.7 184 64.7
Psat5g146360 Pisum sativum HOM05D004274 ORTHO05D004980 1.3e-55 220.3 179 65.4
Carub.0008s1878 Capsella rubella HOM05D004274 ORTHO05D004980 1.7e-55 219.9 175 66.9
AL8G34340 Arabidopsis lyrata HOM05D004274 ORTHO05D004980 1.5e-54 216.9 184 63.6
Ciclev10006852m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.5e-54 216.9 200 58.5
Ah.01g002020 Amaranthus hybridus HOM05D004274 ORTHO05D004980 2.5e-54 216.1 162 67.9
Gorai.011G165300 Gossypium raimondii HOM05D004274 ORTHO05D004980 1.2e-53 213.8 164 66.5
MELO3C013768.2 Cucumis melo HOM05D004274 ORTHO05D004980 1.6e-53 213.4 212 53.8
Cpa.g.sc84.38 Carica papaya HOM05D004274 ORTHO05D004980 3.6e-53 212.2 166 63.9
SEGI_00344 Sequoiadendron giganteum HOM05D004274 ORTHO05D004980 1.1e-52 210.7 161 65.8
CSS0034718 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.4e-52 210.3 166 65.1
Eucgr.D01050 Eucalyptus grandis HOM05D004274 ORTHO05D004980 4.0e-52 208.8 163 66.3
SalBow2G3254 Salvia bowleyana HOM05D004274 ORTHO05D004980 8.9e-52 207.6 165 64.8
arahy.Tifrunner.gnm1.ann1.VY09I5 Arachis hypogaea HOM05D004274 ORTHO05D004980 2.6e-51 206.1 176 60.8
Medtr3g063030 Medicago truncatula HOM05D004274 ORTHO05D004980 2.6e-51 206.1 162 64.8
Psat5g146320 Pisum sativum HOM05D004274 ORTHO05D004980 2.6e-51 206.1 162 66.7
FAN11G1599 Fragaria x ananassa HOM05D004274 ORTHO05D004980 7.6e-51 204.5 164 65.9
Ciclev10006524m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.3e-50 203.8 164 63.4
CANSAT54G0115 Cannabis sativa HOM05D004274 ORTHO05D004980 1.7e-50 203.4 165 61.8
RcHm_v2.0_Chr5g0074031 Rosa chinensis HOM05D004274 ORTHO05D004980 1.1e-49 200.7 139 72.7
Zm00001eb265500 Zea mays HOM05D004274 ORTHO05D004980 1.1e-49 200.7 161 65.8
Aqoxy2G00658 Aquilegia oxysepala HOM05D004274 ORTHO05D004980 2.4e-49 199.5 164 63.4
Prupe.6G037600 Prunus persica HOM05D004274 ORTHO05D004980 2.4e-49 199.5 169 62.1
Lsat_1_v5_gn_8_98760 Lactuca sativa HOM05D004274 ORTHO05D004980 3.2e-49 199.1 160 63.1
Glyma.18G049000 Glycine max HOM05D004274 ORTHO05D004980 7.1e-49 198.0 162 62.3
TPR.G37420 Trifolium pratense HOM05D004274 ORTHO05D004980 9.2e-49 197.6 171 60.8
PSO339G1462 Papaver somniferum HOM05D004274 ORTHO05D004980 1.6e-48 196.8 173 59.5
Lj6g0019258 Lotus japonicus HOM05D004274 ORTHO05D004980 2.1e-48 196.4 162 62.3
Sc04g0008110 Simmondsia chinensis HOM05D004274 ORTHO05D004980 4.6e-48 195.3 163 58.9
MD03G1046300 Malus domestica HOM05D004274 ORTHO05D004980 1.0e-47 194.1 118 79.7
ClCG10G003560 Citrullus lanatus HOM05D004274 ORTHO05D004980 1.3e-47 193.7 162 59.3
SMO351G0049 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 1.3e-47 193.7 159 61.6
vmacro14660 Vaccinium macrocarpon HOM05D004274 ORTHO05D004980 1.7e-47 193.4 113 83.2
Atru.chr1.1108 Acer truncatum HOM05D004274 ORTHO05D004980 2.3e-47 193.0 115 82.6
Sabra19G0129400 Salix brachista HOM05D004274 ORTHO05D004980 2.3e-47 193.0 112 83.9
ATR0743G223 Amborella trichopoda HOM05D004274 ORTHO05D004980 5.1e-47 191.8 127 75.6
Sc14g0008130 Simmondsia chinensis HOM05D004274 ORTHO05D004980 5.1e-47 191.8 113 83.2
CAN.G3.27 Capsicum annuum HOM05D004274 ORTHO05D004980 6.6e-47 191.4 113 79.6
Potri.019G133200 Populus trichocarpa HOM05D004274 ORTHO05D004980 1.9e-46 189.9 110 83.6
Glyma.11G201800 Glycine max HOM05D004274 ORTHO05D004980 3.3e-46 189.1 162 59.9
RcHm_v2.0_Chr5g0074041 Rosa chinensis HOM05D004274 ORTHO05D004980 4.3e-46 188.7 164 63.4
COL.COLO4_34964 Corchorus olitorius HOM05D004274 ORTHO05D004980 5.6e-46 188.3 118 79.7
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis HOM05D004274 ORTHO05D004980 7.3e-46 188.0 178 56.7
Eucgr.D01049 Eucalyptus grandis HOM05D004274 ORTHO05D004980 1.2e-45 187.2 112 82.1
Atru.chr1.1109 Acer truncatum HOM05D004274 ORTHO05D004980 8.1e-45 184.5 113 78.8
Os11g0120725 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 8.1e-45 184.5 161 59.0
TAR633G0792 Trochodendron aralioides HOM05D004274 ORTHO05D004980 1.1e-44 184.1 112 82.1
Potri.013G161100 Populus trichocarpa HOM05D004274 ORTHO05D004980 3.1e-44 182.6 127 70.9
HPP92_015444 Vanilla planifolia HOM05D004274 ORTHO05D004980 4.0e-44 182.2 116 79.3
Dinv28766 Davidia involucrata HOM05D004274 ORTHO05D004980 5.2e-44 181.8 110 81.8
EL10Ac9g22874 Beta vulgaris HOM05D004274 ORTHO05D004980 1.2e-43 180.6 127 72.4
SMO163G0095 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 1.5e-43 180.3 172 54.7
TWI32G0546 Tripterygium wilfordii HOM05D004274 ORTHO05D004980 2.6e-43 179.5 169 57.4
Medtr3g062950 Medicago truncatula HOM05D004274 ORTHO05D004980 4.4e-43 178.7 166 60.2
CBR_g39157 Chara braunii HOM05D004274 ORTHO05D004980 5.8e-43 178.3 159 57.2
CiPaw.14G047000 Carya illinoinensis HOM05D004274 ORTHO05D004980 7.6e-43 177.9 163 58.9
CARHR272040 Cardamine hirsuta HOM05D004274 ORTHO05D004980 1.3e-42 177.2 113 75.2
CDE08G1523 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 1.1e-41 174.1 114 74.6
Phvul.006G082500 Phaseolus vulgaris HOM05D004274 ORTHO05D004980 1.9e-41 173.3 162 54.9
Nn4g26698 Nelumbo nucifera HOM05D004274 ORTHO05D004980 1.2e-40 170.6 200 50.0
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 1.6e-40 170.2 178 51.1
Lalb_Chr15g0085541 Lupinus albus HOM05D004274 ORTHO05D004980 2.1e-40 169.9 138 63.0
MD11G1049100 Malus domestica HOM05D004274 ORTHO05D004980 4.6e-40 168.7 164 55.5
arahy.Tifrunner.gnm1.ann1.1VUI6H Arachis hypogaea HOM05D004274 ORTHO05D004980 6.0e-40 168.3 116 70.7
MCO06G292 Micromonas commoda HOM05D004274 ORTHO05D004980 2.3e-39 166.4 170 54.1
Sed0025842 Sechium edule HOM05D004274 ORTHO05D004980 1.1e-38 164.1 137 62.8
Cre17.g698266 Chlamydomonas reinhardtii HOM05D004274 ORTHO05D004980 2.5e-38 162.9 172 51.2
FvH4_3g41230 Fragaria vesca HOM05D004274 ORTHO05D004980 3.3e-38 162.5 164 56.7
Actinidia23822 Actinidia chinensis HOM05D004274 ORTHO05D004980 1.8e-36 156.8 186 55.4
ECA236G4332 Erigeron canadensis HOM05D004274 ORTHO05D004980 1.8e-36 156.8 98 77.6
Pp3c4_3210 Physcomitrium patens HOM05D004274 ORTHO05D004980 2.6e-35 152.9 131 54.2
PRCOL_00000589 Prasinoderma coloniale HOM05D004274 ORTHO05D004980 5.8e-35 151.8 181 47.0
Hund24406 Selenicereus undatus HOM05D004274 ORTHO05D004980 3.0e-31 139.4 77 81.8
Ciclev10005970m.g Citrus clementina HOM05D004274 ORTHO05D004980 3.9e-31 139.0 196 48.5
CSS0035716 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 3.3e-30 136.0 149 54.4
SGA_v2.0_scaffold8G04481 Striga asiatica HOM05D004274 ORTHO05D004980 3.3e-30 136.0 182 47.8
MELO3C014026.2 Cucumis melo HOM05D004274 ORTHO05D004980 2.1e-29 133.3 110 59.1
FvH4_3g41190 Fragaria vesca HOM05D004274 ORTHO05D004980 1.4e-28 130.6 112 60.7
QL01p023459 Quercus lobata HOM05D004274 ORTHO05D004980 2.2e-26 123.2 70 87.1
CSS0003603 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 2.4e-25 119.8 72 80.6
unitig_26.g10228 Utricularia gibba HOM05D004274 ORTHO05D004980 5.4e-25 118.6 113 57.5
HanXRQChr08g0231121 Helianthus annuus HOM05D004274 ORTHO05D004980 2.1e-24 116.7 83 74.7
ClCG00G000300 Citrullus lanatus HOM05D004274 ORTHO05D004980 3.5e-24 115.9 162 43.2
MBI03_g31635_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 1.3e-23 114.0 72 79.2
MBI03_g31636_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 5.1e-23 112.1 73 76.7
Os12g0120400 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.6e-21 107.1 68 69.1
FAN12G2850 Fragaria x ananassa HOM05D004274 ORTHO05D004980 2.8e-21 106.3 124 51.6
FvH4_4g07220 Fragaria vesca HOM05D004274 ORTHO05D004980 6.9e-20 101.7 119 52.1
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 4.5e-19 99.0 155 42.6
ClCG00G001760 Citrullus lanatus HOM05D004274 ORTHO05D004980 6.5e-18 95.1 92 53.3
Lsat_1_v5_gn_1_8900 Lactuca sativa HOM05D004274 ORTHO05D004980 2.5e-17 93.2 62 75.8
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 1.3e-15 87.4 158 35.4
Solyc09g018630.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 1.1e-12 77.8 51 72.5
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 1.5e-11 73.9 83 45.8
Solyc09g018650.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 3.4e-11 72.8 58 65.5
Dinv28765 Davidia involucrata HOM05D004274 ORTHO05D004980 4.5e-11 72.4 58 65.5
Os09g0246250 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 1.0e-10 71.2 47 61.7
Hund24328 Selenicereus undatus HOM05D004274 ORTHO05D004980 8.4e-10 68.2 43 72.1
MSTRG.21280 Avicennia marina HOM05D004274 ORTHO05D004980 1.4e-09 67.4 77 57.1
Actinidia34514 Actinidia chinensis HOM05D004274 ORTHO05D004980 2.5e-09 66.6 44 68.2
Potri.019G133101 Populus trichocarpa HOM05D004274 ORTHO05D004980 2.5e-09 66.6 88 46.6
Sabra19G0129300 Salix brachista HOM05D004274 ORTHO05D004980 3.2e-09 66.2 70 52.9
arahy.Tifrunner.gnm1.ann1.8HSJ02 Arachis hypogaea HOM05D002696 ORTHO05D011600 5.5e-09 65.5 38 73.7
MSTRG.12721 Avicennia marina HOM05D004274 ORTHO05D004980 5.5e-09 65.5 76 48.7
MSTRG.18523 Avicennia marina HOM05D004274 ORTHO05D004980 5.5e-09 65.5 46 58.7
QL01p023462 Quercus lobata HOM05D004274 ORTHO05D004980 9.3e-09 64.7 38 76.3
HPP92_015443 Vanilla planifolia HOM05D004274 ORTHO05D004980 2.7e-08 63.2 44 63.6
MD03G1046400 Malus domestica HOM05D004274 ORTHO05D004980 3.5e-08 62.8 41 73.2
ClCG10G000760 Citrullus lanatus HOM05D004274 ORTHO05D004980 1.3e-07 60.8 41 65.9
RcHm_v2.0_Chr1g0353171 Rosa chinensis HOM05D004274 ORTHO05D004980 1.3e-07 60.8 98 38.8
HanXRQChr08g0231131 Helianthus annuus HOM05D004274 ORTHO05D004980 1.8e-07 60.5 40 72.5
CDE08G1045 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 2.3e-07 60.1 41 63.4
RcHm_v2.0_Chr5g0074021 Rosa chinensis HOM05D004274 ORTHO05D004980 2.3e-07 60.1 75 48.0
RcHm_v2.0_Chr4g0402251 Rosa chinensis HOM05D005483 ORTHO05D006924 9.7e-06 54.7 40 62.5


User provided reference genes

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