Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 6.1e-100 367.5 184 100.0
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.0e-58 229.6 182 69.8
Sopen03g010810 Solanum pennellii HOM05D009000 ORTHO05D010659 3.3e-45 185.7 189 56.6
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 1.6e-44 183.3 175 59.4
Nitab4.5_0001152g0700 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.4e-43 180.3 150 67.3
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 1.8e-43 179.9 185 57.8
Nitab4.5_0008916g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.4e-40 170.2 155 62.6
Nitab4.5_0010223g0020 Nicotiana tabacum HOM05D009000 ORTHO05D010659 8.7e-38 161.0 124 72.6
Nitab4.5_0000886g0140 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.8e-35 153.3 130 67.7
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 6.9e-35 151.4 143 53.8
Nitab4.5_0001788g0060 Nicotiana tabacum HOM05D000743 ORTHO05D000580 5.0e-33 145.2 118 68.6
Nitab4.5_0002418g0170 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.1e-31 138.3 184 47.3
Nitab4.5_0000172g0650 Nicotiana tabacum HOM05D009000 ORTHO05D010659 7.4e-29 131.3 149 51.0
Nitab4.5_0002326g0080 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.6e-26 122.9 152 52.0
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 4.2e-24 115.5 143 51.7
Nitab4.5_0007293g0090 Nicotiana tabacum HOM05D009000 ORTHO05D010659 3.9e-22 109.0 114 60.5
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 5.7e-21 105.1 192 39.1
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 4.1e-19 99.0 120 53.3
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 6.9e-19 98.2 168 41.1
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 5.9e-18 95.1 169 39.1
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 3.8e-17 92.4 169 38.5
Psat4g185640 Pisum sativum HOM05D000743 ORTHO05D000580 1.1e-16 90.9 114 50.0
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 9.4e-16 87.8 127 40.2
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 9.4e-16 87.8 155 36.1
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 1.2e-15 87.4 135 36.3
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 6.1e-15 85.1 128 35.9
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 1.1e-13 80.9 119 41.2
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 2.0e-13 80.1 119 42.0
Nitab4.5_0000844g0080 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.6e-13 79.7 67 70.1
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 3.3e-13 79.3 144 36.1
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 3.3e-13 79.3 179 36.9
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 5.7e-13 78.6 139 36.7
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 7.4e-13 78.2 139 36.7
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 1.7e-12 77.0 92 56.5
Nitab4.5_0007373g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 4.8e-12 75.5 79 51.9
arahy.Tifrunner.gnm1.ann1.LV33NP Arachis hypogaea HOM05D009000 ORTHO05D010659 1.8e-11 73.6 156 34.6
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 2.4e-11 73.2 108 39.8
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 2.4e-11 73.2 155 34.2
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 3.1e-11 72.8 111 38.7
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 4.1e-11 72.4 124 36.3
Solyc12g021320.1 Solanum lycopersicum HOM05D009000 ORTHO05D010659 4.1e-11 72.4 56 58.9
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.0e-10 70.1 118 34.7
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.0e-10 70.1 118 34.7
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.0e-10 70.1 118 34.7
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 2.0e-10 70.1 118 34.7
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 3.5e-10 69.3 85 42.4
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 4.5e-10 68.9 152 33.6
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 5.9e-10 68.6 153 39.2
Glyma.05G092200 Glycine max HOM05D009000 ORTHO05D010659 1.0e-09 67.8 100 41.0
Ca_25385_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013491 5.0e-09 65.5 114 35.1
Nitab4.5_0000681g0260 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.5e-09 65.1 96 50.0
Peaxi162Scf01967g00002 Petunia axillaris HOM05D015862 ORTHO05D010659 1.5e-08 63.9 103 38.8
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 4.2e-08 62.4 87 40.2
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 7.2e-08 61.6 135 33.3
Peaxi162Scf02507g00003 Petunia axillaris HOM05D015862 ORTHO05D010659 1.2e-07 60.8 129 34.9
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 2.7e-07 59.7 132 34.8
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 3.6e-07 59.3 118 34.7
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 3.0e-06 56.2 74 39.2


User provided reference genes

Program Settings