Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0388431 Helianthus annuus HOM05D005101 ORTHO05D001271 0.0e+00 1181.0 810 100.0
ECA233G5568 Erigeron canadensis HOM05D005101 ORTHO05D001271 2.0e-49 201.8 592 34.5
SalBow7G2128 Salvia bowleyana HOM05D005101 ORTHO05D001271 2.8e-48 198.0 430 34.9
HanXRQChr07g0204251 Helianthus annuus HOM05D005101 ORTHO05D001271 1.0e-45 189.5 534 35.2
HanXRQChr08g0216541 Helianthus annuus HOM05D005101 ORTHO05D001271 2.5e-44 184.9 552 31.5
ECA232G4886 Erigeron canadensis HOM05D005101 ORTHO05D001271 3.6e-43 181.0 418 35.4
Lj4C813T13 Lonicera japonica HOM05D005101 ORTHO05D001271 4.7e-43 180.6 261 42.1
Dinv23351 Davidia involucrata HOM05D005101 ORTHO05D001271 1.0e-42 179.5 461 32.5
Lsat_1_v5_gn_8_25240 Lactuca sativa HOM05D005101 ORTHO05D001271 6.8e-42 176.8 444 34.0
MD06G1001600 Malus domestica HOM05D005101 ORTHO05D001271 2.8e-40 171.4 454 30.0
CiPaw.07G130900 Carya illinoinensis HOM05D005101 ORTHO05D001271 8.3e-40 169.9 478 32.2
MSTRG.24898 Avicennia marina HOM05D005101 ORTHO05D001271 2.4e-39 168.3 468 31.4
Cc10_g00130 Coffea canephora HOM05D005101 ORTHO05D001271 2.4e-39 168.3 458 31.2
QL02p016087 Quercus lobata HOM05D005101 ORTHO05D001271 2.4e-39 168.3 481 31.0
FAN08G1478 Fragaria x ananassa HOM05D005101 ORTHO05D001271 5.4e-39 167.2 459 32.5
Prupe.5G002400 Prunus persica HOM05D005101 ORTHO05D001271 7.0e-39 166.8 466 31.3
FAN13G2092 Fragaria x ananassa HOM05D005101 ORTHO05D001271 3.5e-38 164.5 463 32.2
THA.LOC104812021 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 3.5e-38 164.5 285 36.5
Atru.chr13.27 Acer truncatum HOM05D005101 ORTHO05D001271 4.5e-38 164.1 503 30.8
TAR628G1111 Trochodendron aralioides HOM05D005101 ORTHO05D001271 4.5e-38 164.1 428 31.3
Oeu064738.2 Olea europaea HOM05D005101 ORTHO05D001271 5.9e-38 163.7 461 31.5
FAN18G2527 Fragaria x ananassa HOM05D005101 ORTHO05D001271 7.7e-38 163.3 463 32.0
FAN04G0351 Fragaria x ananassa HOM05D005101 ORTHO05D001271 1.0e-37 162.9 459 32.0
Oeu059862.1 Olea europaea HOM05D005101 ORTHO05D001271 1.3e-37 162.5 249 41.0
CSS0024940 Camellia sinensis var. sinensis HOM05D005101 ORTHO05D001271 1.7e-37 162.2 477 32.5
ECA232G4517 Erigeron canadensis HOM05D005101 ORTHO05D001271 2.9e-37 161.4 229 42.8
TAR376G0758 Trochodendron aralioides HOM05D005101 ORTHO05D001271 2.9e-37 161.4 455 29.2
TAR381G0675 Trochodendron aralioides HOM05D005101 ORTHO05D001271 2.9e-37 161.4 284 35.6
GSVIVG01013451001 Vitis vinifera HOM05D005101 ORTHO05D001271 3.8e-37 161.0 474 30.4
Migut.C00341 Erythranthe guttata HOM05D005101 ORTHO05D001271 1.5e-36 159.1 470 30.4
Haze_22881 Corylus avellana HOM05D005101 ORTHO05D001271 2.5e-36 158.3 446 31.8
Migut.C00640 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.5e-36 158.3 486 31.5
CiPaw.08G078400 Carya illinoinensis HOM05D005101 ORTHO05D001271 3.2e-36 157.9 465 31.6
Ciclev10000062m.g Citrus clementina HOM05D005101 ORTHO05D001271 4.2e-36 157.5 464 33.0
Hma1.2p1_0914F.1_g236180 Hydrangea macrophylla HOM05D005101 ORTHO05D001271 4.2e-36 157.5 225 41.3
Cpa.g.sc36.107 Carica papaya HOM05D005101 ORTHO05D001271 9.5e-36 156.4 464 30.4
Cfa014159 Carpinus fangiana HOM05D005101 ORTHO05D001271 1.2e-35 156.0 446 31.6
SGA_v2.0_scaffold26G11270 Striga asiatica HOM05D005101 ORTHO05D001271 1.2e-35 156.0 534 31.8
THA.LOC104813728 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 2.1e-35 155.2 322 32.9
BcaB07g32090 Brassica carinata HOM05D005101 ORTHO05D001271 3.6e-35 154.5 285 34.0
A06p17010 Brassica napus HOM05D005101 ORTHO05D001271 4.7e-35 154.1 323 32.2
BraA06t24808Z Brassica rapa HOM05D005101 ORTHO05D001271 4.7e-35 154.1 323 32.2
BcaC05g26005 Brassica carinata HOM05D005101 ORTHO05D001271 6.1e-35 153.7 323 32.2
C05p19640 Brassica napus HOM05D005101 ORTHO05D001271 6.1e-35 153.7 323 32.2
BolC5t30665H Brassica oleracea HOM05D005101 ORTHO05D001271 6.1e-35 153.7 323 32.2
Sabra06G0146700 Salix brachista HOM05D005101 ORTHO05D001271 6.1e-35 153.7 355 32.7
Sp1g18670 Schrenkiella parvula HOM05D005101 ORTHO05D001271 8.0e-35 153.3 327 32.1
Sed0027880 Sechium edule HOM05D005101 ORTHO05D001271 1.4e-34 152.5 280 36.1
Carub.0001s2044 Capsella rubella HOM05D005101 ORTHO05D001271 1.8e-34 152.1 294 33.7
FvH4_5g26490 Fragaria vesca HOM05D005101 ORTHO05D001271 2.3e-34 151.8 463 30.9
CARHR021430 Cardamine hirsuta HOM05D005101 ORTHO05D001271 4.0e-34 151.0 333 32.1
CsaV3_4G037750 Cucumis sativus L. HOM05D005101 ORTHO05D001271 2.0e-33 148.7 461 32.1
Potri.006G191500 Populus trichocarpa HOM05D005101 ORTHO05D001271 2.0e-33 148.7 470 28.3
AL1G34040 Arabidopsis lyrata HOM05D005101 ORTHO05D001271 2.6e-33 148.3 322 32.0
Thhalv10006715m.g Eutrema salsugineum HOM05D005101 ORTHO05D001271 2.6e-33 148.3 260 35.4
Sopen05g004540 Solanum pennellii HOM05D005101 ORTHO05D001271 3.4e-33 147.9 274 35.4
CANSAT64G2160 Cannabis sativa HOM05D005101 ORTHO05D001271 4.4e-33 147.5 237 37.6
Peaxi162Scf00205g01431 Petunia axillaris HOM05D005101 ORTHO05D001271 9.8e-33 146.4 457 29.8
AT1G20970 Arabidopsis thaliana HOM05D005101 ORTHO05D001271 1.3e-32 146.0 322 32.0
Duzib268G0010 Durio zibethinus HOM05D005101 ORTHO05D001271 2.8e-32 144.8 474 29.3
MELO3C017068.2 Cucumis melo HOM05D005101 ORTHO05D001271 1.4e-31 142.5 461 31.7
Hund14431 Selenicereus undatus HOM05D005101 ORTHO05D001271 1.4e-31 142.5 230 37.4
CAN.G610.9 Capsicum annuum HOM05D005101 ORTHO05D001271 2.4e-31 141.7 473 30.0
Aa31LG7G5150 Aethionema arabicum HOM05D005101 ORTHO05D001271 3.1e-31 141.4 458 29.0
Sc22g0001420 Simmondsia chinensis HOM05D005101 ORTHO05D001271 9.2e-31 139.8 293 32.8
Thecc.07G035700 Theobroma cacao HOM05D005101 ORTHO05D001271 4.5e-30 137.5 475 29.1
Nn5g31073 Nelumbo nucifera HOM05D005101 ORTHO05D001271 7.8e-30 136.7 399 29.8
Oeu030369.3 Olea europaea HOM05D005101 ORTHO05D001271 7.8e-30 136.7 447 30.2
Actinidia37901 Actinidia chinensis HOM05D005101 ORTHO05D001271 1.7e-29 135.6 450 29.8
Glyma.07G159600 Glycine max HOM05D005101 ORTHO05D001271 1.7e-29 135.6 287 33.4
EL10Ac5g12200 Beta vulgaris HOM05D005101 ORTHO05D001271 2.9e-29 134.8 482 29.0
Actinidia33602 Actinidia chinensis HOM05D005101 ORTHO05D001271 1.5e-28 132.5 233 37.8
vmacro04431 Vaccinium macrocarpon HOM05D005101 ORTHO05D001271 3.3e-28 131.3 461 30.2
Lj2g0011718 Lotus japonicus HOM05D005101 ORTHO05D001271 7.3e-28 130.2 495 30.1
Psat6g132160 Pisum sativum HOM05D005101 ORTHO05D001271 7.3e-28 130.2 237 36.7
TPR.G22374 Trifolium pratense HOM05D005101 ORTHO05D001271 9.5e-28 129.8 237 35.4
unitig_32.g11138 Utricularia gibba HOM05D005101 ORTHO05D001271 9.5e-28 129.8 444 29.3
Nitab4.5_0000694g0200 Nicotiana tabacum HOM05D005101 ORTHO05D001271 1.6e-27 129.0 454 27.3
PGR031G3180 Punica granatum HOM05D005101 ORTHO05D001271 1.6e-27 129.0 239 36.0
Nitab4.5_0002112g0140 Nicotiana tabacum HOM05D005101 ORTHO05D001271 2.1e-27 128.6 471 27.4
AUR62018772 Chenopodium quinoa HOM05D005101 ORTHO05D001271 3.6e-27 127.9 293 31.1
Glyma.20G006500 Glycine max HOM05D005101 ORTHO05D001271 6.1e-27 127.1 242 37.2
RcHm_v2.0_Chr7g0217401 Rosa chinensis HOM05D005101 ORTHO05D001271 1.8e-26 125.6 470 27.2
DCAR_013950 Daucus carota HOM05D005101 ORTHO05D001271 3.0e-26 124.8 449 28.3
Dinv05511 Davidia involucrata HOM05D005101 ORTHO05D001271 4.0e-26 124.4 397 32.0
Phvul.003G008900 Phaseolus vulgaris HOM05D005101 ORTHO05D001271 4.0e-26 124.4 482 27.2
AUR62007227 Chenopodium quinoa HOM05D005101 ORTHO05D001271 5.2e-26 124.0 293 30.4
Gohir.A01G080000 Gossypium hirsutum HOM05D005101 ORTHO05D001271 5.2e-26 124.0 470 31.1
Gohir.D01G067200 Gossypium hirsutum HOM05D005101 ORTHO05D001271 8.9e-26 123.2 475 30.1
PSO675G4128 Papaver somniferum HOM05D005101 ORTHO05D001271 4.4e-25 120.9 233 31.3
TWI56G0322 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 7.5e-25 120.2 467 31.5
TWI36G1399 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 9.8e-25 119.8 492 27.4
unitig_8.g4908 Utricularia gibba HOM05D005101 ORTHO05D001271 1.7e-24 119.0 318 27.7
Lalb_Chr04g0258871 Lupinus albus HOM05D005101 ORTHO05D001271 2.2e-24 118.6 289 30.8
Lalb_Chr17g0338131 Lupinus albus HOM05D005101 ORTHO05D001271 8.3e-24 116.7 472 27.5
Ah.07g200000 Amaranthus hybridus HOM05D005101 ORTHO05D001271 4.1e-23 114.4 315 29.8
Gorai.002G089100 Gossypium raimondii HOM05D005101 ORTHO05D001271 1.6e-22 112.5 471 29.9
Ca_25723_v3 Cicer arietinum L. HOM05D005101 ORTHO05D001271 2.0e-22 112.1 178 39.3
Medtr1g035040 Medicago truncatula HOM05D005101 ORTHO05D001271 3.5e-22 111.3 237 32.9
Gohir.A04G015650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 3.0e-21 108.2 272 29.8
Rhsim07G0258200 Rhododendron simsii HOM05D005101 ORTHO05D001271 5.0e-21 107.5 465 28.4
Gohir.D05G370650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 6.6e-21 107.1 272 29.0
Gorai.009G438800 Gossypium raimondii HOM05D005101 ORTHO05D001271 6.6e-21 107.1 272 28.7
ECA232G0026 Erigeron canadensis HOM05D005101 ORTHO05D023322 1.9e-20 105.5 244 32.0
MBI04_g11526_MAGBIO Magnolia biondii HOM05D005101 ORTHO05D001271 2.5e-20 105.1 461 26.7
Gorai.009G439100 Gossypium raimondii HOM05D005101 ORTHO05D001271 4.3e-20 104.4 275 29.1
Lalb_Chr10g0095281 Lupinus albus HOM05D005101 ORTHO05D001271 7.3e-20 103.6 461 26.9
PSO541G3235 Papaver somniferum HOM05D005101 ORTHO05D001271 1.2e-19 102.8 233 29.2
DCAR_017623 Daucus carota HOM05D005101 ORTHO05D001271 2.8e-19 101.7 467 25.5
Lsat_1_v5_gn_9_48100 Lactuca sativa HOM05D005101 ORTHO05D001271 1.5e-17 95.9 385 28.6
Ah.12g053660 Amaranthus hybridus HOM05D005101 ORTHO05D001271 9.8e-17 93.2 426 25.6
Sc07g0008820 Simmondsia chinensis HOM05D005101 ORTHO05D001271 2.2e-16 92.0 453 24.7
Aqoxy6G03044 Aquilegia oxysepala HOM05D005101 ORTHO05D001271 1.4e-15 89.4 466 24.7
arahy.Tifrunner.gnm1.ann1.DXQU4L Arachis hypogaea HOM05D005101 ORTHO05D001271 1.2e-14 86.3 319 25.1
arahy.Tifrunner.gnm1.ann1.CZE161 Arachis hypogaea HOM05D005101 ORTHO05D001271 4.6e-14 84.3 319 25.1
Aqoxy5G00948 Aquilegia oxysepala HOM05D000015 ORTHO05D003512 6.0e-14 84.0 244 27.0
CDE10G1108 Ceratophyllum demersum HOM05D041590 ORTHO05D043859 7.8e-14 83.6 123 38.2
CDE10G1114 Ceratophyllum demersum HOM05D005101 ORTHO05D001271 1.0e-13 83.2 231 31.6
Eucgr.F03616 Eucalyptus grandis HOM05D005101 ORTHO05D001271 5.0e-13 80.9 254 28.7
Gohir.D05G370550 Gossypium hirsutum HOM05D005101 ORTHO05D001271 2.5e-12 78.6 272 25.4
Zm00001eb102050 Zea mays HOM05D005101 ORTHO05D001271 1.6e-11 75.9 308 26.3
Manes.05G129900 Manihot esculenta HOM05D005101 ORTHO05D001271 2.8e-11 75.1 449 25.6
VMungo1215G2445 Vigna mungo HOM05D005101 ORTHO05D001271 1.1e-10 73.2 474 23.2
HPP92_015728 Vanilla planifolia HOM05D005101 ORTHO05D001271 1.8e-10 72.4 442 25.1
ATR0605G356 Amborella trichopoda HOM05D005101 ORTHO05D001271 4.0e-10 71.2 272 24.3
Zm00001eb316990 Zea mays HOM05D005101 ORTHO05D001271 6.8e-10 70.5 228 26.8
Migut.A00256 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.9e-08 65.1 275 28.0
Migut.O00735 Erythranthe guttata HOM05D005101 ORTHO05D001271 6.4e-08 63.9 253 26.1
Lsat_1_v5_gn_6_56301 Lactuca sativa HOM05D001292 ORTHO05D001202 3.2e-07 61.6 85 44.7
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 1.6e-06 59.3 286 21.7
CBR_g45701 Chara braunii HOM05D002105 ORTHO05D001271 6.0e-06 57.4 292 25.3


User provided reference genes

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