Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0388401 Helianthus annuus HOM05D008711 ORTHO05D010134 2.6e-232 808.5 463 100.0
HanXRQChr04g0112501 Helianthus annuus HOM05D008711 ORTHO05D010134 4.2e-222 774.6 475 95.4
HanXRQChr13g0411941 Helianthus annuus HOM05D008711 ORTHO05D010134 9.3e-222 773.5 463 96.8
HanXRQChr02g0051481 Helianthus annuus HOM05D008711 ORTHO05D010134 1.3e-90 337.8 208 80.8
HanXRQChr09g0267211 Helianthus annuus HOM05D008711 ORTHO05D010134 5.5e-89 332.4 208 79.8
HanXRQChr05g0153861 Helianthus annuus HOM05D008711 ORTHO05D010134 2.8e-85 320.1 174 87.9
HanXRQChr09g0269311 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-84 318.2 169 91.7
HanXRQChr03g0084961 Helianthus annuus HOM05D008711 ORTHO05D225718 1.3e-74 284.6 142 99.3
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 2.3e-47 194.1 262 42.4
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 1.2e-46 191.8 262 42.0
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 7.5e-46 189.1 262 42.0
Lsat_1_v5_gn_1_118581 Lactuca sativa HOM05D008975 ORTHO05D010134 1.7e-29 134.8 239 35.1
HanXRQChr05g0155991 Helianthus annuus HOM05D008711 ORTHO05D010134 2.4e-28 131.0 230 33.0
Lsat_1_v5_gn_7_49700 Lactuca sativa HOM05D008711 ORTHO05D010134 5.4e-28 129.8 256 31.2
HanXRQChr17g0570621 Helianthus annuus HOM05D008711 ORTHO05D010134 3.9e-26 123.6 204 39.2
Lsat_1_v5_gn_4_120840 Lactuca sativa HOM05D008711 ORTHO05D010134 6.2e-24 116.3 257 31.1
Lsat_1_v5_gn_9_114661 Lactuca sativa HOM05D008975 ORTHO05D010134 2.0e-22 111.3 241 28.6
HanXRQChr16g0506111 Helianthus annuus HOM05D008711 ORTHO05D223891 4.4e-22 110.2 145 42.1
Lsat_1_v5_gn_3_67000 Lactuca sativa HOM05D008711 ORTHO05D010134 1.7e-21 108.2 205 30.7
Lsat_1_v5_gn_7_35221 Lactuca sativa HOM05D008975 ORTHO05D010134 1.7e-21 108.2 236 31.4
Lsat_1_v5_gn_1_87921 Lactuca sativa HOM05D008711 ORTHO05D010134 6.4e-21 106.3 206 32.0
Lsat_1_v5_gn_5_68461 Lactuca sativa HOM05D008975 ORTHO05D010134 6.4e-21 106.3 208 33.2
HanXRQChr16g0506101 Helianthus annuus HOM05D008711 ORTHO05D010134 8.4e-21 105.9 126 46.8
Lsat_1_v5_gn_6_40041 Lactuca sativa HOM05D008711 ORTHO05D010134 8.4e-21 105.9 205 32.2
Lsat_1_v5_gn_5_46440 Lactuca sativa HOM05D008975 ORTHO05D010134 1.1e-20 105.5 236 30.1
Lsat_1_v5_gn_8_156001 Lactuca sativa HOM05D008975 ORTHO05D010134 4.2e-20 103.6 236 29.7
Lsat_1_v5_gn_6_66280 Lactuca sativa HOM05D008975 ORTHO05D010134 1.2e-19 102.1 246 30.1
Lsat_1_v5_gn_4_33981 Lactuca sativa HOM05D008975 ORTHO05D010134 6.0e-19 99.8 214 28.0
HanXRQChr11g0328781 Helianthus annuus HOM05D008711 ORTHO05D010134 1.7e-18 98.2 176 35.8
HanXRQChr11g0350941 Helianthus annuus HOM05D008711 ORTHO05D010134 7.3e-17 92.8 60 58.3
HanXRQChr08g0219021 Helianthus annuus HOM05D008711 ORTHO05D010134 1.6e-16 91.7 111 46.8
Lsat_1_v5_gn_6_48940 Lactuca sativa HOM05D008975 ORTHO05D010134 2.8e-16 90.9 116 39.7
Lsat_1_v5_gn_3_59061 Lactuca sativa HOM05D008975 ORTHO05D010134 4.8e-16 90.1 194 30.9
HanXRQChr10g0309221 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-15 89.0 153 39.2
Lsat_1_v5_gn_7_107900 Lactuca sativa HOM05D008975 ORTHO05D010134 1.1e-15 89.0 104 41.3
ECA247G2380 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.0e-15 87.0 262 26.3
HanXRQChr02g0057461 Helianthus annuus HOM05D008711 ORTHO05D010134 3.4e-14 84.0 128 36.7
Lsat_1_v5_gn_5_49621 Lactuca sativa HOM05D008975 ORTHO05D010134 7.6e-14 82.8 92 42.4
Lsat_1_v5_gn_6_4521 Lactuca sativa HOM05D008975 ORTHO05D010134 7.6e-14 82.8 90 42.2
Lsat_1_v5_gn_5_60441 Lactuca sativa HOM05D008711 ORTHO05D010134 1.4e-12 78.6 141 35.5
ECA238G0956 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.9e-12 78.2 245 27.3
Lsat_1_v5_gn_1_81260 Lactuca sativa HOM05D008975 ORTHO05D010134 3.2e-12 77.4 133 33.8
Sc11g0006580 Simmondsia chinensis HOM05D000420 ORTHO05D000110 4.2e-12 77.0 187 26.7
Lsat_1_v5_gn_4_114181 Lactuca sativa HOM05D008975 ORTHO05D010134 4.6e-11 73.6 129 33.3
Lsat_1_v5_gn_1_82100 Lactuca sativa HOM05D008975 ORTHO05D010134 1.0e-10 72.4 196 29.1
Lsat_1_v5_gn_1_46460 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-10 72.0 129 34.9
Lsat_1_v5_gn_7_51421 Lactuca sativa HOM05D008975 ORTHO05D010134 1.8e-10 71.6 110 39.1
Lsat_1_v5_gn_1_118781 Lactuca sativa HOM05D008975 ORTHO05D010134 3.9e-10 70.5 92 39.1
ECA247G0117 Erigeron canadensis HOM05D000420 ORTHO05D000110 2.5e-09 67.8 193 26.9
HanXRQChr05g0161201 Helianthus annuus HOM05D015005 ORTHO05D000110 7.4e-09 66.2 248 23.0
HanXRQChr14g0443171 Helianthus annuus HOM05D015005 ORTHO05D000110 7.4e-09 66.2 248 23.0
Lsat_1_v5_gn_8_17220 Lactuca sativa HOM05D008711 ORTHO05D010134 7.4e-09 66.2 140 33.6
ECA247G3410 Erigeron canadensis HOM05D008959 ORTHO05D000110 1.6e-08 65.1 170 25.9
HanXRQChr06g0173991 Helianthus annuus HOM05D008711 ORTHO05D010134 1.8e-07 61.6 82 34.1
HanXRQChr08g0228301 Helianthus annuus HOM05D008711 ORTHO05D010134 1.8e-07 61.6 82 34.1
HanXRQChr02g0040951 Helianthus annuus HOM05D008711 ORTHO05D221315 4.0e-07 60.5 42 61.9
Lsat_1_v5_gn_7_74920 Lactuca sativa HOM05D008975 ORTHO05D010134 4.0e-07 60.5 236 24.2
TWI73G1084 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 4.0e-07 60.5 167 28.7
TWI73G0935 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 2.6e-06 57.8 189 24.9
HanXRQChr03g0064601 Helianthus annuus HOM05D015005 ORTHO05D000110 3.4e-06 57.4 228 21.1
Lsat_1_v5_gn_6_73561 Lactuca sativa HOM05D008975 ORTHO05D010134 4.5e-06 57.0 111 33.3
HanXRQChr05g0146391 Helianthus annuus HOM05D008711 ORTHO05D010134 9.9e-06 55.8 64 39.1
HanXRQChr12g0356521 Helianthus annuus HOM05D008711 ORTHO05D010134 9.9e-06 55.8 64 39.1


User provided reference genes

Program Settings