Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0387221 Helianthus annuus HOM05D002903 ORTHO05D003066 6.9e-108 394.0 206 100.0
HanXRQChr11g0322701 Helianthus annuus HOM05D002903 ORTHO05D003066 6.2e-16 88.6 225 35.1
Lsat_1_v5_gn_0_33040 Lactuca sativa HOM05D002903 ORTHO05D003066 1.5e-14 84.0 212 34.0
ECA232G2707 Erigeron canadensis HOM05D002903 ORTHO05D003066 1.1e-12 77.8 163 35.6
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 4.6e-11 72.4 191 30.9
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 1.3e-10 70.9 191 30.4
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 1.3e-10 70.9 191 30.4
Cfa002912 Carpinus fangiana HOM05D002903 ORTHO05D003066 1.7e-10 70.5 168 33.3
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 2.3e-10 70.1 165 32.1
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 3.9e-10 69.3 133 34.6
Lsat_1_v5_gn_0_1360 Lactuca sativa HOM05D000094 ORTHO05D001056 6.6e-10 68.6 96 46.9
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.5e-09 67.4 157 32.5
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 7.3e-09 65.1 112 38.4
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 9.5e-09 64.7 109 40.4
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 1.2e-08 64.3 122 36.9
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.6e-08 63.9 165 30.9
Sopen05g034770 Solanum pennellii HOM05D002903 ORTHO05D003066 2.1e-08 63.5 105 43.8
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 2.8e-08 63.2 99 40.4
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 3.6e-08 62.8 100 43.0
Oeu004513.1 Olea europaea HOM05D002903 ORTHO05D003066 4.7e-08 62.4 132 35.6
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 6.2e-08 62.0 129 32.6
PGSC0003DMG400023449 Solanum tuberosum HOM05D002903 ORTHO05D003066 6.2e-08 62.0 99 46.5
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 8.1e-08 61.6 146 33.6
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 8.1e-08 61.6 134 35.1
Solyc05g056380.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 8.1e-08 61.6 105 44.8
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 1.1e-07 61.2 174 33.3
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.4e-07 60.8 182 30.8
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 1.4e-07 60.8 170 30.0
Prupe.4G272900 Prunus persica HOM05D002903 ORTHO05D003066 1.4e-07 60.8 242 26.9
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.8e-07 60.5 119 37.0
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.8e-07 60.5 119 37.0
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 3.1e-07 59.7 153 33.3
Aqoxy6G00279 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 4.0e-07 59.3 106 38.7
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 5.2e-07 58.9 111 39.6
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 5.2e-07 58.9 97 37.1
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 6.8e-07 58.5 107 39.3
RcHm_v2.0_Chr2g0121941 Rosa chinensis HOM05D002903 ORTHO05D003066 6.8e-07 58.5 157 29.9
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 6.8e-07 58.5 132 33.3
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 8.9e-07 58.2 127 33.1
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 8.9e-07 58.2 149 30.2
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 8.9e-07 58.2 126 33.3
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 1.2e-06 57.8 136 32.4
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.2e-06 57.8 127 32.3
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 1.5e-06 57.4 127 32.3
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 2.0e-06 57.0 123 31.7
CAN.G1156.31 Capsicum annuum HOM05D013549 ORTHO05D003066 3.4e-06 56.2 120 37.5
CiPaw.04G081400 Carya illinoinensis HOM05D002903 ORTHO05D003066 4.4e-06 55.8 179 29.6
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 4.4e-06 55.8 180 30.0
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 5.8e-06 55.5 125 32.8
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 5.8e-06 55.5 98 36.7
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 5.8e-06 55.5 144 31.2
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 5.8e-06 55.5 129 35.7
Psat6g040160 Pisum sativum HOM05D002903 ORTHO05D003066 5.8e-06 55.5 206 27.7
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 7.5e-06 55.1 195 30.8
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 7.5e-06 55.1 110 37.3
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 7.5e-06 55.1 106 33.0
Duzib187G0480 Durio zibethinus HOM05D002903 ORTHO05D003066 7.5e-06 55.1 131 32.1
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 7.5e-06 55.1 130 30.8
Gohir.D05G241400 Gossypium hirsutum HOM05D002903 ORTHO05D003066 9.9e-06 54.7 122 34.4
Gorai.009G250800 Gossypium raimondii HOM05D002903 ORTHO05D003066 9.9e-06 54.7 122 34.4
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 9.9e-06 54.7 102 41.2
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 9.9e-06 54.7 168 26.8


User provided reference genes

Program Settings