Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 2.6e-222 775.0 379 100.0
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.2e-196 688.3 379 87.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.3e-189 666.4 379 84.7
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 2.1e-171 605.9 381 75.6
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.7e-171 604.7 381 75.9
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.7e-171 604.7 381 75.9
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.8e-167 592.8 381 75.9
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 6.6e-165 584.3 400 72.2
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.1e-162 575.5 381 72.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 6.4e-160 567.8 381 71.7
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.1e-159 567.0 381 71.1
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.9e-159 566.2 381 71.1
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.9e-159 566.2 374 73.5
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 4.1e-159 565.1 373 72.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 8.6e-157 557.4 381 70.3
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.8e-155 552.4 381 70.6
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 8.9e-154 547.4 382 68.8
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.0e-153 546.2 374 70.9
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 6.4e-152 541.2 381 67.7
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.0e-149 533.9 381 68.5
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 2.8e-147 525.8 379 68.3
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.6e-147 525.4 381 66.7
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 6.2e-147 524.6 380 67.4
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.5e-145 520.0 381 65.6
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.0e-145 519.6 378 68.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.3e-144 516.9 380 66.1
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.8e-144 515.4 374 65.8
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 8.4e-144 514.2 381 64.3
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.1e-143 513.8 376 67.3
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.4e-143 512.7 380 65.8
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 4.1e-143 511.9 376 67.0
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 9.2e-143 510.8 376 67.0
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 4.6e-142 508.4 377 65.8
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 7.8e-142 507.7 377 65.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.7e-141 506.5 378 65.1
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 2.3e-141 506.1 378 65.6
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.0e-141 505.8 374 63.6
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 3.0e-141 505.8 380 65.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.9e-141 505.4 374 65.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 8.6e-141 504.2 381 64.3
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.1e-140 503.8 374 65.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.1e-140 503.8 380 64.7
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 3.3e-140 502.3 377 63.9
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 9.6e-140 500.7 375 63.7
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 8.1e-139 497.7 377 64.7
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 8.1e-139 497.7 381 64.6
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.1e-138 497.3 381 61.9
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.1e-138 497.3 375 63.7
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 1.1e-138 497.3 377 63.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 6.9e-138 494.6 355 64.2
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 9.0e-138 494.2 375 64.8
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.6e-137 492.7 381 61.2
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 9.9e-137 490.7 377 62.9
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.7e-136 490.0 408 60.3
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 6.4e-136 488.0 356 66.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.4e-135 486.1 381 64.0
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 4.2e-135 485.3 380 63.4
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 4.2e-135 485.3 374 62.3
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 7.1e-135 484.6 381 60.1
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 9.3e-135 484.2 379 62.3
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.1e-134 483.0 361 65.1
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.7e-134 482.6 378 60.6
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 4.6e-134 481.9 424 58.5
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 5.1e-133 478.4 383 59.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 5.1e-133 478.4 352 65.6
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.1e-132 477.2 374 60.7
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.9e-132 476.5 361 64.3
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 7.3e-132 474.6 404 61.1
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.3e-131 473.8 383 59.3
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.1e-130 470.7 373 61.9
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.4e-130 470.3 379 59.6
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.4e-130 470.3 381 61.2
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 4.0e-130 468.8 379 59.6
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 4.0e-130 468.8 302 76.8
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 5.3e-130 468.4 378 62.7
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.5e-129 466.8 379 59.1
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.5e-129 466.8 384 59.1
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 4.9e-128 461.8 379 59.1
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 7.1e-127 458.0 381 58.3
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.2e-126 457.2 380 58.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.2e-126 457.2 380 58.9
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 8.7e-125 451.1 374 56.4
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.5e-124 449.5 326 66.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 7.4e-124 448.0 375 59.7
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.3e-123 447.2 379 55.9
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 2.1e-123 446.4 374 58.6
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.8e-121 438.3 374 57.0
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 7.6e-121 438.0 374 57.0
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 2.2e-120 436.4 321 64.8
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 2.9e-120 436.0 354 57.9
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.4e-120 434.5 374 57.2
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 7.1e-119 431.4 381 55.6
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 9.3e-119 431.0 379 59.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.2e-118 430.6 379 57.0
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 3.9e-117 425.6 357 60.5
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.5e-116 422.9 379 59.4
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 4.3e-116 422.2 275 73.8
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 5.6e-116 421.8 383 54.6
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 4.8e-115 418.7 304 68.1
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.1e-114 417.5 378 55.0
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 2.3e-109 399.8 253 74.3
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.5e-105 387.1 276 68.1
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 2.2e-104 383.3 287 65.5
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.9e-104 382.9 283 66.8
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.9e-100 370.2 261 67.4
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 5.1e-93 345.5 385 44.7
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 6.7e-93 345.1 364 48.1
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 6.3e-91 338.6 375 46.1
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 4.1e-90 335.9 398 47.7
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.5e-87 326.6 341 50.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.3e-85 320.1 372 44.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 3.0e-85 319.7 227 67.4
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.4e-77 294.3 219 63.0
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.4e-77 294.3 188 73.4
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 2.6e-76 290.0 191 72.3
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 2.2e-72 276.9 388 35.8
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 7.0e-50 202.2 167 58.7
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.7e-48 197.6 146 63.7
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.3e-35 154.8 198 46.5
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.1e-29 135.2 86 74.4
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 4.0e-29 133.3 108 56.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.5e-28 131.3 114 57.0
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 3.1e-13 80.5 78 52.6
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.7e-11 74.7 144 33.3
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 7.1e-10 69.3 43 62.8
Lsat_1_v5_gn_3_108601 Lactuca sativa HOM05D032460 ORTHO05D233467 5.1e-08 63.2 58 62.1


User provided reference genes

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