Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 3.3e-164 581.6 292 100.0
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.4e-143 512.3 290 86.9
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 4.8e-139 498.0 293 83.3
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 6.9e-138 494.2 293 83.3
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 6.7e-133 477.6 292 81.8
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.4e-127 459.9 292 79.1
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.9e-127 459.5 292 78.4
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.6e-126 456.4 294 80.3
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.5e-124 449.1 290 79.3
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.7e-123 445.3 290 76.9
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 8.2e-123 444.1 293 76.1
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 2.4e-122 442.6 291 76.6
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 4.1e-122 441.8 291 75.6
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 1.2e-121 440.3 277 79.4
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.2e-121 440.3 291 74.6
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.2e-121 440.3 291 74.6
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.5e-121 438.3 292 74.7
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 6.5e-120 434.5 290 75.2
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 8.5e-120 434.1 294 74.1
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.4e-119 433.3 291 74.9
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 2.5e-119 432.6 298 73.8
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.5e-119 432.6 290 75.5
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.5e-119 432.6 291 74.6
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 3.2e-119 432.2 288 75.0
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 3.2e-119 432.2 291 73.9
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.1e-118 429.5 282 75.2
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.8e-115 419.1 290 75.9
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 2.8e-115 419.1 283 74.2
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 8.2e-115 417.5 283 75.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 2.4e-114 416.0 298 70.5
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 6.9e-114 414.5 297 70.0
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 9.1e-114 414.1 285 74.4
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 1.5e-113 413.3 287 73.9
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 1.5e-113 413.3 290 72.8
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.6e-113 412.5 283 74.2
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.6e-113 412.5 283 74.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 2.6e-113 412.5 289 71.6
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 5.9e-113 411.4 298 69.5
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 5.9e-113 411.4 290 72.4
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 5.9e-113 411.4 283 74.2
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 1.0e-112 410.6 283 74.2
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 1.3e-112 410.2 297 69.4
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.3e-112 410.2 286 73.1
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.7e-112 409.8 284 73.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.7e-112 409.8 286 73.1
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.7e-112 409.8 284 73.9
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 5.0e-112 408.3 277 75.8
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.1e-111 407.1 276 74.6
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.4e-111 406.8 282 72.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 2.5e-111 406.0 288 71.2
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 3.2e-111 405.6 283 73.1
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 5.5e-111 404.8 282 72.0
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 7.2e-111 404.4 282 71.6
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 7.2e-111 404.4 282 72.0
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 9.4e-111 404.1 282 72.3
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 9.4e-111 404.1 282 72.3
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.2e-110 403.7 282 72.3
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 2.7e-110 402.5 282 73.0
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 2.7e-110 402.5 297 67.3
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 3.6e-110 402.1 283 72.8
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 4.7e-110 401.7 282 72.0
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 6.1e-110 401.4 291 72.2
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 7.9e-110 401.0 285 72.6
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 7.9e-110 401.0 291 71.5
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.4e-109 400.2 282 71.6
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.8e-109 399.8 290 71.0
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.8e-109 399.8 282 70.9
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.3e-109 399.4 283 72.4
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.3e-109 399.4 283 72.8
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 2.3e-109 399.4 289 72.3
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 3.9e-109 398.7 283 72.1
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 8.8e-109 397.5 283 72.1
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.5e-108 396.7 288 71.5
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.5e-108 396.7 283 72.1
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.0e-108 396.4 292 70.5
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.6e-108 396.0 287 71.1
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 3.3e-108 395.6 296 69.9
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 7.4e-108 394.4 282 72.0
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 9.7e-108 394.0 283 72.1
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 9.7e-108 394.0 287 71.4
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 2.2e-107 392.9 285 70.9
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 2.8e-107 392.5 282 70.6
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 4.8e-107 391.7 282 72.0
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 4.8e-107 391.7 285 70.9
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 4.8e-107 391.7 282 72.0
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 4.8e-107 391.7 282 69.5
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 6.3e-107 391.3 285 70.9
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 6.3e-107 391.3 285 70.5
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 8.2e-107 391.0 282 71.6
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.1e-106 390.6 282 71.6
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.1e-106 390.6 282 72.0
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.1e-106 390.6 282 71.6
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 1.1e-106 390.6 284 72.2
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 1.4e-106 390.2 285 70.9
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 1.4e-106 390.2 283 70.0
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 1.4e-106 390.2 298 67.8
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.1e-106 389.0 282 71.3
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 3.1e-106 389.0 295 65.1
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 5.3e-106 388.3 282 70.6
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 5.3e-106 388.3 288 69.8
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 5.3e-106 388.3 282 70.9
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 7.0e-106 387.9 282 70.6
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 7.0e-106 387.9 289 70.9
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.0e-106 387.9 288 69.8
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 9.1e-106 387.5 282 70.9
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 9.1e-106 387.5 282 71.6
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 9.1e-106 387.5 289 70.9
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 1.6e-105 386.7 288 69.4
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.6e-105 386.7 283 71.0
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.0e-105 386.3 288 69.4
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 3.5e-105 385.6 282 70.2
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 3.5e-105 385.6 282 70.2
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 3.5e-105 385.6 282 70.2
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.5e-105 385.6 283 71.7
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.5e-105 385.2 282 70.2
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 5.9e-105 384.8 283 70.3
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.0e-104 384.0 288 69.4
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.7e-104 383.3 293 69.3
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.7e-104 383.3 288 69.4
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 2.2e-104 382.9 288 70.8
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 6.5e-104 381.3 288 70.5
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 6.5e-104 381.3 244 77.5
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 6.5e-104 381.3 283 68.9
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 3.2e-103 379.0 280 70.0
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 9.4e-103 377.5 276 71.4
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 2.1e-102 376.3 276 71.4
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 3.6e-102 375.6 276 71.0
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 4.7e-102 375.2 285 69.8
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 1.0e-101 374.0 289 67.1
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.8e-101 373.2 288 70.1
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 6.3e-99 364.8 283 68.6
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 8.2e-99 364.4 293 62.8
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 5.3e-98 361.7 282 66.3
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 5.9e-97 358.2 289 66.1
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.1e-95 354.0 295 64.7
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 1.5e-95 353.6 305 62.6
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 8.0e-94 347.8 296 64.2
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 5.2e-93 345.1 306 61.1
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.6e-92 342.8 306 61.1
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.7e-91 339.0 308 60.1
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 4.5e-89 332.0 295 60.0
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 1.3e-88 330.5 285 62.8
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-88 330.5 261 66.7
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.0e-85 319.3 290 59.3
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.9e-79 300.1 279 58.1
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 8.3e-75 284.6 195 76.4
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-72 277.3 278 56.1
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 3.6e-70 269.2 278 54.0
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 4.7e-70 268.9 207 69.1
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 4.6e-65 252.3 276 52.2
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 4.6e-65 252.3 163 75.5
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 9.2e-58 228.0 281 45.9
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 3.5e-57 226.1 143 79.7
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-56 224.2 265 52.8
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 4.3e-55 219.2 131 80.9
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 2.4e-50 203.4 142 70.4
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 6.2e-46 188.7 152 65.1
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 2.1e-25 120.6 283 30.7
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 6.7e-24 115.5 97 58.8
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 2.5e-18 97.1 105 52.4
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 5.5e-18 95.9 69 69.6
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-16 91.3 105 48.6
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 3.7e-14 83.2 91 49.5
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 3.7e-14 83.2 71 59.2
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-07 61.6 85 45.9
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 2.8e-06 57.0 67 47.8
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 8.2e-06 55.5 152 29.6
PSO478G3396 Papaver somniferum HOM05D005748 ORTHO05D007123 8.2e-06 55.5 130 33.8


User provided reference genes

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