Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 1.1e-66 256.5 127 100.0
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 3.4e-57 224.9 131 86.3
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.2e-17 93.6 87 55.2
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 1.3e-16 90.1 92 54.3
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.7e-16 89.7 91 54.9
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 8.5e-16 87.4 98 51.0
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 5.5e-15 84.7 100 49.0
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 1.6e-14 83.2 95 45.3
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 2.7e-14 82.4 94 48.9
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 4.6e-14 81.6 114 43.9
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 6.1e-14 81.3 94 47.9
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 6.1e-14 81.3 90 51.1
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 6.1e-14 81.3 111 40.5
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 7.9e-14 80.9 102 43.1
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.0e-13 80.5 98 48.0
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.0e-13 80.5 98 48.0
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 1.4e-13 80.1 108 44.4
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.4e-13 80.1 95 45.3
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.4e-13 80.1 98 48.0
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 1.8e-13 79.7 106 47.2
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 2.3e-13 79.3 97 48.5
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 2.3e-13 79.3 109 42.2
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 3.9e-13 78.6 100 45.0
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 3.9e-13 78.6 87 47.1
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.9e-13 78.6 87 47.1
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 3.9e-13 78.6 109 45.0
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 3.9e-13 78.6 100 47.0
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 5.1e-13 78.2 101 45.5
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 5.1e-13 78.2 89 47.2
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 6.7e-13 77.8 106 41.5
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 6.7e-13 77.8 104 43.3
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 6.7e-13 77.8 111 39.6
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 8.8e-13 77.4 97 47.4
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 8.8e-13 77.4 97 47.4
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 8.8e-13 77.4 116 41.4
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 8.8e-13 77.4 86 50.0
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.1e-12 77.0 94 45.7
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 1.1e-12 77.0 87 48.3
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 1.5e-12 76.6 91 48.4
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 1.9e-12 76.3 101 42.6
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 1.9e-12 76.3 93 45.2
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 1.9e-12 76.3 97 46.4
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 2.5e-12 75.9 107 44.9
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.5e-12 75.9 101 47.5
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 4.3e-12 75.1 97 46.4
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.3e-12 75.1 87 44.8
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 4.3e-12 75.1 101 41.6
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 4.3e-12 75.1 105 42.9
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 5.7e-12 74.7 91 47.3
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 7.4e-12 74.3 95 44.2
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 9.7e-12 73.9 95 45.3
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 1.3e-11 73.6 94 43.6
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 1.3e-11 73.6 101 44.6
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 1.7e-11 73.2 86 44.2
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.7e-11 73.2 104 40.4
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 2.2e-11 72.8 98 42.9
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 2.8e-11 72.4 88 47.7
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 4.8e-11 71.6 110 42.7
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 6.3e-11 71.2 87 46.0
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 6.3e-11 71.2 100 42.0
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 6.3e-11 71.2 85 44.7
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 8.2e-11 70.9 100 44.0
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 8.2e-11 70.9 102 43.1
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.1e-10 70.5 90 45.6
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 1.1e-10 70.5 96 44.8
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.8e-10 69.7 91 44.0
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 1.8e-10 69.7 102 43.1
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 1.8e-10 69.7 102 43.1
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.4e-10 69.3 96 43.8
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.4e-10 69.3 89 43.8
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 2.4e-10 69.3 89 43.8
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 3.1e-10 68.9 99 44.4
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 3.1e-10 68.9 111 41.4
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 3.1e-10 68.9 115 40.0
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 4.1e-10 68.6 111 41.4
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 5.3e-10 68.2 97 45.4
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 1.2e-09 67.0 94 42.6
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 2.0e-09 66.2 91 41.8
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 3.4e-09 65.5 96 39.6
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 3.4e-09 65.5 124 32.3
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 3.4e-09 65.5 115 38.3
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 3.4e-09 65.5 89 43.8
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 4.5e-09 65.1 91 46.2
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 4.5e-09 65.1 95 43.2
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 7.7e-09 64.3 86 45.3
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 7.7e-09 64.3 97 43.3
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 2.2e-08 62.8 89 41.6
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 3.8e-08 62.0 108 38.0
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 2.5e-07 59.3 86 41.9
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 1.2e-06 57.0 103 37.9
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.6e-06 56.6 72 44.4
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 7.9e-06 54.3 74 41.9
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 7.9e-06 54.3 74 41.9


User provided reference genes

Program Settings