Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 3.0e-100 368.6 202 100.0
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 1.4e-49 200.3 217 57.6
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.9e-42 176.0 230 48.7
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 8.4e-42 174.5 241 45.2
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 1.2e-40 170.6 203 48.8
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 4.6e-40 168.7 257 43.2
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 6.0e-40 168.3 232 45.7
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.3e-39 167.2 243 44.9
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 6.6e-39 164.9 246 44.7
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 6.6e-39 164.9 232 44.8
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.5e-38 163.7 190 52.6
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 1.5e-38 163.7 203 47.3
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 2.5e-38 162.9 226 45.1
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 5.6e-38 161.8 204 49.0
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 5.6e-38 161.8 195 50.3
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 7.3e-38 161.4 243 44.9
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.6e-37 160.2 240 44.2
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.6e-37 160.2 248 41.9
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.6e-37 160.2 248 41.9
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.6e-37 160.2 219 46.1
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.6e-37 160.2 238 43.3
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 2.1e-37 159.8 248 41.5
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 2.8e-37 159.5 192 49.5
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 2.8e-37 159.5 245 42.9
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 3.6e-37 159.1 187 50.3
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 4.8e-37 158.7 186 51.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 6.2e-37 158.3 245 42.9
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 6.2e-37 158.3 206 46.1
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 6.2e-37 158.3 238 45.0
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 8.1e-37 157.9 171 53.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.1e-36 157.5 251 41.4
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.4e-36 157.1 226 44.2
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.8e-36 156.8 234 43.6
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 3.1e-36 156.0 199 48.2
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 4.0e-36 155.6 177 51.4
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 4.0e-36 155.6 177 51.4
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.2e-35 154.1 228 43.0
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 1.2e-35 154.1 217 46.5
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 4.4e-35 152.1 254 40.9
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 4.4e-35 152.1 178 50.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 5.8e-35 151.8 232 45.3
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 7.6e-35 151.4 250 41.2
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 9.9e-35 151.0 135 63.0
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 9.9e-35 151.0 135 63.0
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.7e-34 150.2 185 51.9
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 2.2e-34 149.8 177 51.4
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.9e-34 149.4 188 50.0
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 2.9e-34 149.4 203 46.3
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 3.8e-34 149.1 201 47.3
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 3.8e-34 149.1 189 48.1
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 8.4e-34 147.9 214 43.9
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 8.4e-34 147.9 191 52.4
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.1e-33 147.5 201 44.8
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.1e-33 147.5 233 42.9
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.1e-33 147.5 240 39.6
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.4e-33 147.1 203 46.3
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.9e-33 146.7 257 40.5
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 2.4e-33 146.4 232 40.1
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 2.4e-33 146.4 234 39.3
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 4.2e-33 145.6 151 53.6
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 7.1e-33 144.8 173 49.7
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.6e-32 143.7 247 40.9
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 3.5e-32 142.5 237 40.5
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 4.6e-32 142.1 247 41.3
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.0e-31 141.0 248 40.3
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.7e-31 140.2 237 38.8
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 2.3e-31 139.8 239 38.9
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.3e-31 139.8 215 42.8
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 8.7e-31 137.9 210 43.8
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 8.7e-31 137.9 211 43.6
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 8.7e-31 137.9 211 43.6
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 8.7e-31 137.9 210 43.8
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 8.7e-31 137.9 303 35.3
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.5e-30 137.1 172 47.7
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.5e-30 136.3 203 43.8
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 2.5e-30 136.3 233 39.5
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 2.5e-30 136.3 261 38.7
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.3e-30 136.0 231 40.7
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.6e-30 135.2 232 40.5
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.3e-29 134.0 222 43.7
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.6e-29 133.7 227 41.0
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 1.6e-29 133.7 178 46.1
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 4.8e-29 132.1 227 42.3
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 6.2e-29 131.7 232 40.1
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.4e-28 130.6 222 42.8
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.8e-28 130.2 190 44.7
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.8e-28 130.2 217 41.0
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 4.0e-28 129.0 289 34.3
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 5.3e-28 128.6 187 44.4
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 7.6e-27 124.8 206 42.2
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 9.9e-27 124.4 195 40.5
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.3e-26 124.0 199 43.2
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.7e-26 123.6 210 43.3
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 4.6e-24 115.5 191 42.4
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 5.1e-23 112.1 218 39.4
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 3.7e-21 105.9 164 41.5
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 3.7e-21 105.9 227 35.2
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.2e-19 100.9 262 32.8
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 4.6e-16 89.0 156 37.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 8.7e-15 84.7 102 47.1
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 6.2e-13 78.6 104 48.1
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 1.1e-06 57.8 126 34.9
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 9.7e-06 54.7 89 40.4


User provided reference genes

Program Settings