Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.9e-37 158.7 82 100.0
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.5e-26 122.5 75 84.0
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.7e-25 119.0 82 74.4
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 2.9e-25 118.2 82 74.4
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.8e-25 117.9 79 74.7
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 4.9e-25 117.5 82 74.4
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 4.9e-25 117.5 79 75.9
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 6.4e-25 117.1 72 81.9
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.1e-24 116.3 79 74.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 3.2e-24 114.8 79 73.4
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 3.2e-24 114.8 82 73.2
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.2e-23 112.8 76 75.0
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.6e-23 112.5 82 69.5
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 2.1e-23 112.1 83 69.9
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 4.6e-23 110.9 77 72.7
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 6.0e-23 110.5 79 72.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 7.9e-23 110.2 76 73.7
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 7.9e-23 110.2 78 70.5
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 7.9e-23 110.2 78 70.5
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.0e-22 109.8 79 68.4
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.0e-22 109.8 76 71.1
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-22 109.4 79 69.6
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-22 109.4 79 69.6
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 1.3e-22 109.4 76 71.1
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 1.3e-22 109.4 77 71.4
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 76 71.1
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.8e-22 109.0 76 71.1
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.8e-22 109.0 76 71.1
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.8e-22 109.0 69 78.3
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.8e-22 109.0 79 69.6
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 2.3e-22 108.6 76 71.1
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 3.0e-22 108.2 79 70.9
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 3.9e-22 107.8 69 76.8
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.9e-22 107.8 75 69.3
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 3.9e-22 107.8 86 65.1
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 5.1e-22 107.5 76 72.4
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 5.1e-22 107.5 76 71.1
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 6.7e-22 107.1 76 71.1
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 6.7e-22 107.1 76 68.4
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 8.7e-22 106.7 69 78.3
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.1e-21 106.3 76 69.7
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.1e-21 106.3 68 77.9
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.5e-21 105.9 74 77.0
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.5e-21 105.9 69 75.4
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 2.5e-21 105.1 63 84.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.5e-21 105.1 76 67.1
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 2.5e-21 105.1 79 68.4
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 2.5e-21 105.1 76 67.1
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.5e-21 105.1 63 84.1
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 3.3e-21 104.8 76 68.4
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 3.3e-21 104.8 69 76.8
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.3e-21 104.8 76 69.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.3e-21 104.8 79 64.6
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.3e-21 104.8 79 64.6
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.3e-21 104.8 102 59.8
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 4.3e-21 104.4 76 68.4
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.3e-21 104.4 76 69.7
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 4.3e-21 104.4 76 69.7
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 4.3e-21 104.4 63 84.1
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 4.3e-21 104.4 76 69.7
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 5.6e-21 104.0 69 76.8
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 7.4e-21 103.6 76 69.7
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 7.4e-21 103.6 76 69.7
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 7.4e-21 103.6 76 65.8
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 7.4e-21 103.6 72 72.2
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 9.6e-21 103.2 65 78.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.6e-21 103.2 79 65.8
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 9.6e-21 103.2 63 81.0
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.3e-20 102.8 61 83.6
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.6e-20 102.4 76 65.8
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.6e-20 102.4 76 69.7
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.6e-20 102.4 74 70.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 2.1e-20 102.1 76 65.8
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 8.1e-20 100.1 76 65.8
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 1.4e-19 99.4 76 67.1
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 2.4e-19 98.6 63 76.2
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 3.1e-19 98.2 76 63.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.1e-19 98.2 79 63.3
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 3.1e-19 98.2 63 76.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 4.0e-19 97.8 61 78.7
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.0e-19 96.7 62 75.8
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.0e-19 96.7 62 75.8
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.2e-18 96.3 88 60.2
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 2.0e-18 95.5 78 59.0
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.0e-18 95.5 67 73.1
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 2.0e-18 95.5 68 69.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 7.6e-18 93.6 61 77.0
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 6.5e-17 90.5 95 55.8
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 8.4e-17 90.1 67 67.2
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.4e-16 89.4 69 63.8
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 5.5e-16 87.4 63 66.7
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 9.3e-16 86.7 60 71.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 9.3e-16 86.7 55 80.0
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 9.3e-16 86.7 64 64.1
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 4.6e-15 84.3 51 84.3
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 6.0e-15 84.0 79 51.9
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.0e-14 83.2 76 59.2
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.3e-14 82.8 53 81.1
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 3.0e-14 81.6 50 82.0
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.1e-13 79.7 69 62.3
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.1e-13 79.7 51 78.4
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 3.3e-13 78.2 51 74.5
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 4.3e-13 77.8 52 76.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.4e-11 72.0 71 56.3
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 4.0e-11 71.2 74 54.1
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 9.0e-11 70.1 61 59.0
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.5e-10 69.3 50 74.0
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.7e-09 65.9 69 52.2
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.7e-09 65.9 58 53.4
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.4e-09 63.5 64 56.2
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.6e-07 59.3 38 78.9
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.0e-06 56.6 37 75.7
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 5.1e-06 54.3 57 45.6


User provided reference genes

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