Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 1.3e-76 290.0 198 100.0
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 4.2e-46 188.7 205 67.8
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 1.2e-45 187.2 190 76.8
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 1.3e-31 140.6 190 62.6
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 6.5e-31 138.3 187 60.4
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 8.5e-31 137.9 196 60.7
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 4.2e-30 135.6 199 48.2
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 5.5e-30 135.2 195 49.2
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.5e-30 135.2 195 49.2
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.5e-30 135.2 195 50.8
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.2e-29 134.0 193 61.7
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 2.1e-29 133.3 188 48.9
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 2.1e-29 133.3 197 60.4
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 2.7e-29 132.9 185 61.6
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 3.6e-29 132.5 200 60.5
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 3.6e-29 132.5 191 58.1
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.7e-29 132.1 192 57.8
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 6.1e-29 131.7 195 57.4
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.0e-28 131.0 195 61.0
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.0e-28 131.0 192 58.9
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.0e-28 131.0 192 58.9
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 1.0e-28 131.0 198 57.1
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 1.8e-28 130.2 194 59.8
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.8e-28 130.2 193 58.0
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 3.0e-28 129.4 195 48.2
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 4.0e-28 129.0 193 60.6
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 6.7e-28 128.3 195 57.4
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 6.7e-28 128.3 194 50.5
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 1.5e-27 127.1 162 56.2
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.6e-27 126.3 195 53.8
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 3.3e-27 125.9 190 45.8
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 3.3e-27 125.9 190 60.0
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 7.5e-27 124.8 190 45.8
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 7.5e-27 124.8 192 58.3
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 1.3e-26 124.0 192 46.9
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 1.7e-26 123.6 191 56.0
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 2.2e-26 123.2 190 56.3
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 4.8e-26 122.1 197 58.4
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 1.4e-25 120.6 198 42.4
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 1.8e-25 120.2 204 45.1
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 2.4e-25 119.8 126 74.6
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 3.1e-25 119.4 198 44.4
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 7.0e-25 118.2 192 57.8
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.6e-24 117.1 136 68.4
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 1.6e-24 117.1 190 58.4
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 2.0e-24 116.7 193 54.4
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 2.7e-24 116.3 195 44.1
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 4.5e-24 115.5 146 70.5
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 5.9e-24 115.2 194 49.5
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 1.3e-23 114.0 193 53.9
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 1.7e-23 113.6 194 44.3
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.7e-23 113.6 196 47.4
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 2.9e-23 112.8 130 58.5
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 5.0e-23 112.1 193 51.8
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 5.0e-23 112.1 213 41.8
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 6.5e-23 111.7 114 56.1
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 8.5e-23 111.3 190 55.3
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.1e-22 110.9 199 41.7
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 1.5e-22 110.5 193 43.0
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 1.5e-22 110.5 195 47.7
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 3.2e-22 109.4 181 56.9
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 4.2e-22 109.0 189 56.6
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 4.2e-22 109.0 136 69.1
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 5.5e-22 108.6 189 57.7
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 9.4e-22 107.8 202 49.0
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 2.7e-21 106.3 169 59.8
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 3.6e-21 105.9 210 45.7
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 4.7e-21 105.5 198 56.6
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 4.7e-21 105.5 148 66.2
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 8.0e-21 104.8 168 58.9
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.0e-20 104.4 195 42.6
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.0e-20 104.4 181 47.5
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.8e-20 103.6 171 57.9
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 4.0e-20 102.4 160 48.8
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 4.0e-20 102.4 189 55.6
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 5.2e-20 102.1 163 61.3
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 8.8e-20 101.3 194 42.8
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.2e-19 100.9 196 36.7
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 7.5e-19 98.2 191 38.2
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 1.3e-18 97.4 194 41.2
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 2.8e-18 96.3 201 46.8
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 6.3e-18 95.1 189 44.4
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 1.8e-17 93.6 198 51.0
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 9.1e-17 91.3 131 51.9
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 9.1e-17 91.3 131 51.9
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 9.1e-17 91.3 187 38.5
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 2.0e-16 90.1 128 49.2
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 7.7e-16 88.2 189 38.6
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 1.3e-15 87.4 189 52.9
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 1.7e-15 87.0 188 37.8
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 2.2e-15 86.7 197 39.1
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.9e-15 86.3 194 42.3
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 8.5e-15 84.7 154 37.7
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 2.5e-14 83.2 125 47.2
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 9.4e-14 81.3 196 39.8
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 1.6e-13 80.5 147 41.5
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 1.8e-12 77.0 189 48.7
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 1.5e-11 73.9 189 56.1
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 5.7e-11 72.0 99 49.5
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 3.1e-09 66.2 145 37.9
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 4.1e-09 65.9 110 47.3
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 2.3e-07 60.1 83 75.9


User provided reference genes

Program Settings