Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0382351 Helianthus annuus HOM05D000053 ORTHO05D223277 5.8e-92 340.9 175 100.0
HanXRQChr12g0385831 Helianthus annuus HOM05D000015 ORTHO05D000270 7.1e-13 78.2 59 64.4
ECA236G0561 Erigeron canadensis HOM05D000015 ORTHO05D000270 2.5e-10 69.7 60 51.7
SalBow2G0545 Salvia bowleyana HOM05D000015 ORTHO05D000270 6.2e-09 65.1 59 42.4
SalBow2G1885 Salvia bowleyana HOM05D000015 ORTHO05D000270 6.2e-09 65.1 59 42.4
ECA234G2417 Erigeron canadensis HOM05D000015 ORTHO05D000270 1.1e-08 64.3 55 49.1
Ciclev10029849m.g Citrus clementina HOM05D000015 ORTHO05D000270 8.9e-08 61.2 50 50.0
ECA234G3336 Erigeron canadensis HOM05D000015 ORTHO05D000270 8.9e-08 61.2 54 46.3
ECA247G1429 Erigeron canadensis HOM05D000015 ORTHO05D000270 8.9e-08 61.2 53 49.1
COL.COLO4_30416 Corchorus olitorius HOM05D000015 ORTHO05D000270 3.4e-07 59.3 57 45.6
Lsat_1_v5_gn_4_12580 Lactuca sativa HOM05D000015 ORTHO05D000270 3.4e-07 59.3 54 48.1
Aqoxy1G00799 Aquilegia oxysepala HOM05D000015 ORTHO05D000270 5.8e-07 58.5 114 31.6
HanXRQChr12g0382631 Helianthus annuus HOM05D000053 ORTHO05D000035 5.8e-07 58.5 29 93.1
Lj3A1042T85 Lonicera japonica HOM05D000015 ORTHO05D000270 5.8e-07 58.5 57 38.6
Potri.009G037900 Populus trichocarpa HOM05D000015 ORTHO05D000270 5.8e-07 58.5 56 41.1
Sabra10G0151200 Salix brachista HOM05D000015 ORTHO05D349655 5.8e-07 58.5 55 41.8
Aa31LG9G2310 Aethionema arabicum HOM05D003092 ORTHO05D003977 9.9e-07 57.8 53 43.4
Aqoxy195s002 Aquilegia oxysepala HOM05D000015 ORTHO05D000270 9.9e-07 57.8 53 49.1
Aqoxy1G01081 Aquilegia oxysepala HOM05D000015 ORTHO05D000270 9.9e-07 57.8 53 49.1
C07p31900 Brassica napus HOM05D000015 ORTHO05D000270 9.9e-07 57.8 57 42.1
Manes.01G167604 Manihot esculenta HOM05D000015 ORTHO05D000270 1.3e-06 57.4 57 42.1
BraA06t27315Z Brassica rapa HOM05D000015 ORTHO05D000270 1.7e-06 57.0 57 40.4
BcaC06g34174 Brassica carinata HOM05D000015 ORTHO05D000270 2.2e-06 56.6 57 40.4
A06p44410 Brassica napus HOM05D000015 ORTHO05D000270 2.2e-06 56.6 57 40.4
BolC7t43736H Brassica oleracea HOM05D000015 ORTHO05D000270 2.2e-06 56.6 57 40.4
BraA01t02165Z Brassica rapa HOM05D000015 ORTHO05D000270 2.9e-06 56.2 57 38.6
Ciclev10030060m.g Citrus clementina HOM05D000015 ORTHO05D000270 2.9e-06 56.2 50 42.0
MD07G1037400 Malus domestica HOM05D000015 ORTHO05D000270 2.9e-06 56.2 56 42.9
TWI79G0554 Tripterygium wilfordii HOM05D000015 ORTHO05D000270 2.9e-06 56.2 53 39.6
A01p22500 Brassica napus HOM05D000015 ORTHO05D000270 3.8e-06 55.8 57 38.6
ClCG07G003710 Citrullus lanatus HOM05D000015 ORTHO05D000270 3.8e-06 55.8 57 42.1
Lsat_1_v5_gn_4_7680 Lactuca sativa HOM05D000015 ORTHO05D000270 3.8e-06 55.8 56 44.6
MD11G1092000 Malus domestica HOM05D000015 ORTHO05D000270 3.8e-06 55.8 85 34.1
Ciclev10027939m.g Citrus clementina HOM05D000015 ORTHO05D000270 4.9e-06 55.5 50 46.0
Migut.L01340 Erythranthe guttata HOM05D000015 ORTHO05D000270 4.9e-06 55.5 99 32.3
FvH4_7g02840 Fragaria vesca HOM05D000015 ORTHO05D000270 4.9e-06 55.5 56 41.1
FAN03G3473 Fragaria x ananassa HOM05D000015 ORTHO05D000270 4.9e-06 55.5 56 41.1
FAN06G3318 Fragaria x ananassa HOM05D000015 ORTHO05D000270 4.9e-06 55.5 56 41.1
C01p28030 Brassica napus HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 38.6
Ciclev10000577m.g Citrus clementina HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 42.1
COL.COLO4_30411 Corchorus olitorius HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 42.1
Gohir.A08G000109 Gossypium hirsutum HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 43.9
Gohir.D08G009300 Gossypium hirsutum HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 43.9
Gorai.004G002500 Gossypium raimondii HOM05D000015 ORTHO05D000270 6.4e-06 55.1 57 43.9
BolC1t02737H Brassica oleracea HOM05D000015 ORTHO05D000270 8.4e-06 54.7 57 38.6
Cpa.g.sc81.79 Carica papaya HOM05D000015 ORTHO05D000270 8.4e-06 54.7 57 42.1
DCAR_002209 Daucus carota HOM05D000015 ORTHO05D000270 8.4e-06 54.7 56 39.3
ECA234G3551 Erigeron canadensis HOM05D000015 ORTHO05D000270 8.4e-06 54.7 45 48.9
Prupe.2G032800 Prunus persica HOM05D000015 ORTHO05D000270 8.4e-06 54.7 56 41.1
THA.LOC104808548 Tarenaya hassleriana HOM05D000015 ORTHO05D000270 8.4e-06 54.7 57 40.4


User provided reference genes

Program Settings