Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0382081 Helianthus annuus HOM05D005807 ORTHO05D007121 5.2e-40 167.2 78 100.0
Psat5g159160 Pisum sativum HOM05D005807 ORTHO05D007121 1.7e-11 72.4 88 47.7
HanXRQChr08g0221811 Helianthus annuus HOM05D005807 ORTHO05D007121 2.9e-11 71.6 91 49.5
Actinidia29698 Actinidia chinensis HOM05D005807 ORTHO05D007121 1.1e-10 69.7 94 41.5
HanXRQChr07g0202931 Helianthus annuus HOM05D005807 ORTHO05D007121 1.1e-10 69.7 91 48.4
Aqoxy168s004 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 1.5e-10 69.3 95 44.2
Aqoxy2G00908 Aquilegia oxysepala HOM05D005807 ORTHO05D007121 1.5e-10 69.3 95 44.2
PGR102G0477 Punica granatum HOM05D005807 ORTHO05D007121 1.5e-10 69.3 95 44.2
Glyma.11G175500 Glycine max HOM05D005807 ORTHO05D007121 2.5e-10 68.6 88 45.5
Glyma.18G063100 Glycine max HOM05D005807 ORTHO05D007121 2.5e-10 68.6 91 46.2
Lj5g0019578 Lotus japonicus HOM05D005807 ORTHO05D007121 2.5e-10 68.6 88 45.5
Lj6g0006671 Lotus japonicus HOM05D005807 ORTHO05D007121 2.5e-10 68.6 88 45.5
Actinidia13933 Actinidia chinensis HOM05D005807 ORTHO05D007121 3.3e-10 68.2 88 46.6
GSVIVG01038735001 Vitis vinifera HOM05D005807 ORTHO05D007121 3.3e-10 68.2 88 44.3
MBI14_g11284_MAGBIO Magnolia biondii HOM05D005807 ORTHO05D007121 4.3e-10 67.8 95 42.1
Nitab4.5_0000010g0300 Nicotiana tabacum HOM05D005807 ORTHO05D007121 4.3e-10 67.8 95 42.1
EL10Ac7g16166 Beta vulgaris HOM05D005807 ORTHO05D007121 5.6e-10 67.4 88 43.2
Hma1.2p1_0703F.1_g206510 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 5.6e-10 67.4 95 41.1
Nitab4.5_0008156g0020 Nicotiana tabacum HOM05D005807 ORTHO05D007121 5.6e-10 67.4 95 42.1
Phvul.006G068000 Phaseolus vulgaris HOM05D005807 ORTHO05D007121 5.6e-10 67.4 88 44.3
vmacro10049 Vaccinium macrocarpon HOM05D005807 ORTHO05D007121 5.6e-10 67.4 91 46.2
Lsat_1_v5_gn_2_122940 Lactuca sativa HOM05D005807 ORTHO05D007121 7.3e-10 67.0 91 46.2
TWI36G1710 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 7.3e-10 67.0 88 44.3
arahy.Tifrunner.gnm1.ann1.8F6K17 Arachis hypogaea HOM05D005807 ORTHO05D007121 9.5e-10 66.6 91 45.1
arahy.Tifrunner.gnm1.ann1.B02C3Y Arachis hypogaea HOM05D005807 ORTHO05D007121 9.5e-10 66.6 91 45.1
CSS0007250 Camellia sinensis var. sinensis HOM05D005807 ORTHO05D007121 9.5e-10 66.6 95 42.1
Lalb_Chr18g0050921 Lupinus albus HOM05D005807 ORTHO05D007121 9.5e-10 66.6 88 44.3
SGA_v2.0_scaffold92G28310 Striga asiatica HOM05D005807 ORTHO05D007121 9.5e-10 66.6 93 44.1
TAR636G1782 Trochodendron aralioides HOM05D005807 ORTHO05D007121 9.5e-10 66.6 95 40.0
unitig_8.g3606 Utricularia gibba HOM05D000298 ORTHO05D001646 9.5e-10 66.6 88 45.5
VMungo0540G1230 Vigna mungo HOM05D005807 ORTHO05D007121 9.5e-10 66.6 88 44.3
TWI31G0235 Tripterygium wilfordii HOM05D005807 ORTHO05D007121 1.2e-09 66.2 88 44.3
Ah.15g099940 Amaranthus hybridus HOM05D005807 ORTHO05D007121 1.6e-09 65.9 88 43.2
PSO339G6415 Papaver somniferum HOM05D005807 ORTHO05D007121 1.6e-09 65.9 88 44.3
PSO801G0778 Papaver somniferum HOM05D005807 ORTHO05D007121 1.6e-09 65.9 88 44.3
Potri.001G251204 Populus trichocarpa HOM05D005807 ORTHO05D007121 1.6e-09 65.9 88 43.2
SalBow7G1665 Salvia bowleyana HOM05D005807 ORTHO05D007121 1.6e-09 65.9 95 40.0
THA.LOC104814913 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 1.6e-09 65.9 88 43.2
TAR633G0553 Trochodendron aralioides HOM05D005807 ORTHO05D007121 1.6e-09 65.9 93 41.9
CAN.G394.126 Capsicum annuum HOM05D005807 ORTHO05D007121 2.1e-09 65.5 91 46.2
Cc05_g09980 Coffea canephora HOM05D005807 ORTHO05D007121 2.1e-09 65.5 95 40.0
DCAR_013059 Daucus carota HOM05D000043 ORTHO05D000223 2.1e-09 65.5 88 46.6
Nn2g13704 Nelumbo nucifera HOM05D005807 ORTHO05D007121 2.1e-09 65.5 88 43.2
Sed0012142 Sechium edule HOM05D005807 ORTHO05D007121 2.1e-09 65.5 88 43.2
CANSAT25G1325 Cannabis sativa HOM05D005807 ORTHO05D007121 2.8e-09 65.1 88 43.2
CiPaw.14G059700 Carya illinoinensis HOM05D005807 ORTHO05D007121 2.8e-09 65.1 88 44.3
ClCG03G000770 Citrullus lanatus HOM05D005807 ORTHO05D007121 2.8e-09 65.1 88 43.2
MELO3C020551.2 Cucumis melo HOM05D005807 ORTHO05D007121 2.8e-09 65.1 88 43.2
CsaV3_1G036170 Cucumis sativus L. HOM05D005807 ORTHO05D007121 2.8e-09 65.1 88 43.2
Manes.02G119500 Manihot esculenta HOM05D005807 ORTHO05D007121 2.8e-09 65.1 91 44.0
Sabra16G0152900 Salix brachista HOM05D005807 ORTHO05D007121 2.8e-09 65.1 86 44.2
Atru.chr3.4221 Acer truncatum HOM05D005807 ORTHO05D007121 3.6e-09 64.7 88 43.2
Cpa.g.sc62.98 Carica papaya HOM05D005807 ORTHO05D007121 3.6e-09 64.7 88 43.2
Duzib150G0199 Durio zibethinus HOM05D005807 ORTHO05D007121 4.7e-09 64.3 88 43.2
Eucgr.B02255 Eucalyptus grandis HOM05D005807 ORTHO05D007121 4.7e-09 64.3 91 42.9
Gohir.A13G224500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 4.7e-09 64.3 88 43.2
Gorai.013G260200 Gossypium raimondii HOM05D005807 ORTHO05D007121 4.7e-09 64.3 88 43.2
Solyc06g076940.3 Solanum lycopersicum HOM05D005807 ORTHO05D007121 4.7e-09 64.3 91 45.1
Sopen06g033340 Solanum pennellii HOM05D005807 ORTHO05D007121 4.7e-09 64.3 91 45.1
PGSC0003DMG400030355 Solanum tuberosum HOM05D005807 ORTHO05D007121 4.7e-09 64.3 91 45.1
HPP92_000412 Vanilla planifolia HOM05D005807 ORTHO05D007121 4.7e-09 64.3 88 39.8
FAN16G0682 Fragaria x ananassa HOM05D005807 ORTHO05D007121 6.2e-09 63.9 87 43.7
Prupe.6G057600 Prunus persica HOM05D005807 ORTHO05D007121 6.2e-09 63.9 88 42.0
QL01p038261 Quercus lobata HOM05D005807 ORTHO05D007121 6.2e-09 63.9 114 36.8
Sc12g0000690 Simmondsia chinensis HOM05D005807 ORTHO05D007121 6.2e-09 63.9 88 43.2
AT5G58740 Arabidopsis thaliana HOM05D005807 ORTHO05D007121 8.0e-09 63.5 91 42.9
Duzib168G1045 Durio zibethinus HOM05D005807 ORTHO05D007121 8.0e-09 63.5 88 42.0
Migut.N02895 Erythranthe guttata HOM05D005807 ORTHO05D007121 8.0e-09 63.5 91 42.9
Gohir.D13G229500 Gossypium hirsutum HOM05D005807 ORTHO05D007121 8.0e-09 63.5 95 40.0
Oeu025375.1 Olea europaea HOM05D005807 ORTHO05D007121 8.0e-09 63.5 88 42.0
THA.LOC104810714 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 8.0e-09 63.5 88 42.0
THA.LOC104811269 Tarenaya hassleriana HOM05D005807 ORTHO05D007121 8.0e-09 63.5 88 42.0
MSTRG.22154 Avicennia marina HOM05D005807 ORTHO05D007121 1.4e-08 62.8 88 43.2
FAN21G1466 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.4e-08 62.8 88 42.0
RcHm_v2.0_Chr5g0069441 Rosa chinensis HOM05D005807 ORTHO05D007121 1.4e-08 62.8 88 42.0
Zm00001eb110600 Zea mays HOM05D005807 ORTHO05D007121 1.4e-08 62.8 92 40.2
AL8G35020 Arabidopsis lyrata HOM05D005807 ORTHO05D007121 1.8e-08 62.4 91 41.8
Carub.0008s1936 Capsella rubella HOM05D005807 ORTHO05D007121 1.8e-08 62.4 91 41.8
CARHR272650 Cardamine hirsuta HOM05D005807 ORTHO05D007121 1.8e-08 62.4 88 40.9
CDE06G1535 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 1.8e-08 62.4 88 40.9
Thhalv10014898m.g Eutrema salsugineum HOM05D005807 ORTHO05D007121 1.8e-08 62.4 91 41.8
FvH4_3g38540 Fragaria vesca HOM05D005807 ORTHO05D007121 1.8e-08 62.4 88 42.0
FAN11G3045 Fragaria x ananassa HOM05D005807 ORTHO05D007121 1.8e-08 62.4 88 42.0
Sp6g20430 Schrenkiella parvula HOM05D005807 ORTHO05D007121 1.8e-08 62.4 91 41.8
Thecc.09G301900 Theobroma cacao HOM05D005807 ORTHO05D007121 1.8e-08 62.4 91 42.9
MD11G1074800 Malus domestica HOM05D005807 ORTHO05D007121 2.3e-08 62.0 88 40.9
Os01g0668000 Oryza sativa ssp. japonica HOM05D005807 ORTHO05D007121 2.3e-08 62.0 94 37.2
Sabra09G0033100 Salix brachista HOM05D005807 ORTHO05D007121 3.1e-08 61.6 86 43.0
BcaB01g04495 Brassica carinata HOM05D005807 ORTHO05D007121 4.0e-08 61.2 91 40.7
Ciclev10029472m.g Citrus clementina HOM05D005807 ORTHO05D007121 4.0e-08 61.2 88 40.9
CDE06G1924 Ceratophyllum demersum HOM05D005807 ORTHO05D007121 5.2e-08 60.8 95 37.9
Hma1.2p1_0703F.1_g206500 Hydrangea macrophylla HOM05D005807 ORTHO05D007121 5.2e-08 60.8 122 32.8
SEGI_25973 Sequoiadendron giganteum HOM05D005807 ORTHO05D007121 6.8e-08 60.5 88 36.4
A10p15530 Brassica napus HOM05D005807 ORTHO05D007121 8.9e-08 60.1 91 40.7
BolC9t57942H Brassica oleracea HOM05D005807 ORTHO05D007121 8.9e-08 60.1 91 40.7
BraA10t43680Z Brassica rapa HOM05D005807 ORTHO05D007121 8.9e-08 60.1 91 40.7
MD03G1070800 Malus domestica HOM05D005807 ORTHO05D007121 8.9e-08 60.1 88 39.8
Sed0002691 Sechium edule HOM05D005807 ORTHO05D007121 8.9e-08 60.1 88 40.9
CiPaw.13G077700 Carya illinoinensis HOM05D005807 ORTHO05D007121 1.2e-07 59.7 88 43.2
Aa31LG11G500 Aethionema arabicum HOM05D005807 ORTHO05D007121 1.5e-07 59.3 89 41.6
BcaC04g19835 Brassica carinata HOM05D005807 ORTHO05D007121 2.0e-07 58.9 91 40.7
C09p50820 Brassica napus HOM05D005807 ORTHO05D007121 2.0e-07 58.9 91 40.7
Manes.01G161700 Manihot esculenta HOM05D005807 ORTHO05D007121 5.8e-07 57.4 91 39.6
COL.COLO4_19156 Corchorus olitorius HOM05D005807 ORTHO05D007121 2.9e-06 55.1 101 35.6
Lj8C68T13 Lonicera japonica HOM05D005807 ORTHO05D007121 2.9e-06 55.1 24 91.7
Mapoly0037s0041 Marchantia polymorpha HOM05D005807 ORTHO05D007121 6.4e-06 53.9 88 34.1
SMO116G0032 Selaginella moellendorffii HOM05D005807 ORTHO05D007121 6.4e-06 53.9 88 37.5


User provided reference genes

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