Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 3.7e-42 174.5 89 100.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.7e-34 147.9 84 83.3
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.4e-33 146.0 83 83.1
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 2.4e-33 145.2 86 77.9
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 3.1e-33 144.8 85 81.2
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 3.1e-33 144.8 90 78.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 4.1e-33 144.4 88 77.3
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 7.0e-33 143.7 81 84.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 7.0e-33 143.7 83 81.9
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 9.1e-33 143.3 82 80.5
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 9.1e-33 143.3 83 80.7
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.2e-32 142.9 86 77.9
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.2e-32 142.9 85 81.2
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.2e-32 142.9 82 78.0
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.6e-32 142.5 81 81.5
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.6e-32 142.5 81 81.5
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.6e-32 142.5 81 81.5
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.6e-32 141.7 85 77.6
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.6e-32 141.7 80 81.2
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 3.5e-32 141.4 81 80.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 3.5e-32 141.4 85 78.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 4.5e-32 141.0 81 80.2
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 4.5e-32 141.0 85 77.6
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 4.5e-32 141.0 81 81.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.9e-32 140.6 82 79.3
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.9e-32 140.6 82 79.3
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 5.9e-32 140.6 82 79.3
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 5.9e-32 140.6 82 79.3
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 5.9e-32 140.6 82 79.3
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 7.7e-32 140.2 85 77.6
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 7.7e-32 140.2 81 79.0
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 7.7e-32 140.2 82 79.3
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.3e-31 139.4 89 71.9
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.3e-31 139.4 82 80.5
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.7e-31 139.0 80 81.2
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.7e-31 139.0 82 78.0
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.7e-31 139.0 81 80.2
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.7e-31 139.0 81 80.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.7e-31 139.0 81 81.5
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.2e-31 138.7 81 86.4
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-31 138.7 85 77.6
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.9e-31 138.3 83 75.9
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.9e-31 138.3 83 75.9
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.9e-31 138.3 86 75.6
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 3.8e-31 137.9 81 77.8
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 5.0e-31 137.5 80 77.5
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 8.5e-31 136.7 82 76.8
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 8.5e-31 136.7 77 81.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 8.5e-31 136.7 83 77.1
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.1e-30 136.3 77 81.8
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 1.1e-30 136.3 83 79.5
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.1e-30 136.3 82 75.6
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.1e-30 136.3 84 76.2
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.5e-30 136.0 82 76.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.5e-30 136.0 82 76.8
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.9e-30 135.6 83 75.9
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.9e-30 135.6 85 72.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.5e-30 135.2 85 72.9
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.5e-30 135.2 80 77.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 2.5e-30 135.2 83 74.7
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 3.2e-30 134.8 77 80.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 4.2e-30 134.4 82 80.5
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.5e-30 134.0 83 73.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 7.2e-30 133.7 83 73.5
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 7.2e-30 133.7 77 80.5
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 7.2e-30 133.7 82 76.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.2e-29 132.9 80 76.2
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.1e-29 132.1 81 72.8
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.1e-29 132.1 81 72.8
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.1e-29 132.1 81 72.8
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.7e-29 131.7 81 72.8
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 2.7e-29 131.7 81 72.8
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.7e-29 131.7 103 67.0
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.7e-29 131.7 83 73.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 4.7e-29 131.0 81 71.6
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 6.1e-29 130.6 83 73.5
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 6.1e-29 130.6 81 71.6
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 6.1e-29 130.6 81 71.6
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 6.1e-29 130.6 81 71.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.4e-28 129.4 81 71.6
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.4e-28 129.4 80 75.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.4e-28 129.4 80 75.0
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 4.0e-28 127.9 111 60.4
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 4.0e-28 127.9 77 77.9
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 5.2e-28 127.5 81 70.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 5.2e-28 127.5 77 76.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 6.7e-28 127.1 81 69.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 8.8e-28 126.7 78 75.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.2e-27 126.3 97 63.9
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.5e-27 125.9 97 66.0
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 4.4e-27 124.4 81 67.9
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 5.7e-27 124.0 75 74.7
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 5.7e-27 124.0 75 81.3
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.7e-27 124.0 80 72.5
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 9.7e-27 123.2 80 68.8
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.3e-26 122.9 80 68.8
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.3e-26 120.6 76 71.1
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 8.3e-26 120.2 67 85.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.3e-26 120.2 88 67.0
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-25 119.4 81 66.7
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.4e-25 119.4 70 82.9
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.4e-25 118.6 70 80.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 3.1e-25 118.2 70 81.4
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 5.3e-25 117.5 67 82.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 5.3e-25 117.5 71 77.5
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 7.0e-25 117.1 66 83.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.6e-24 115.9 66 83.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 2.0e-24 115.5 71 78.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.0e-24 115.5 84 67.9
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.5e-24 114.8 76 68.4
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 5.9e-24 114.0 64 84.4
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.6e-21 105.9 64 73.4
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.2e-19 99.8 69 68.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 6.3e-18 94.0 76 56.6
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 5.4e-17 90.9 78 59.0
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.0e-16 89.0 77 59.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 5.0e-15 84.3 57 73.7
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.1e-14 83.2 65 56.9
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 9.5e-14 80.1 44 81.8
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 9.5e-14 80.1 69 52.2
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.6e-11 72.0 52 61.5
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 9.8e-11 70.1 62 58.1
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.7e-10 69.3 64 51.6
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 7.8e-08 60.5 48 58.3
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 7.8e-08 60.5 48 58.3
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 7.8e-08 60.5 48 58.3


User provided reference genes

Program Settings