Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0379281 Helianthus annuus HOM05D008552 ORTHO05D010745 1.3e-153 546.6 312 100.0
Lsat_1_v5_gn_3_91661 Lactuca sativa HOM05D008552 ORTHO05D010745 4.7e-100 368.6 310 68.4
ECA246G1147 Erigeron canadensis HOM05D008552 ORTHO05D010745 7.5e-98 361.3 317 67.5
Potri.005G135700 Populus trichocarpa HOM05D008552 ORTHO05D010745 1.2e-50 204.5 342 42.7
Hma1.2p1_0047F.1_g027720 Hydrangea macrophylla HOM05D008552 ORTHO05D010745 1.6e-44 184.1 331 41.4
COL.COLO4_11369 Corchorus olitorius HOM05D008552 ORTHO05D010745 8.9e-43 178.3 336 41.7
Actinidia12231 Actinidia chinensis HOM05D008552 ORTHO05D010745 4.4e-42 176.0 300 43.0
DCAR_010919 Daucus carota HOM05D008552 ORTHO05D010745 8.4e-41 171.8 326 38.7
Manes.13G125700 Manihot esculenta HOM05D008552 ORTHO05D010745 8.4e-41 171.8 292 40.4
Cc11_g02380 Coffea canephora HOM05D008552 ORTHO05D010745 4.2e-40 169.5 251 44.6
Prupe.7G137300 Prunus persica HOM05D008552 ORTHO05D010745 5.1e-38 162.5 322 37.3
Thecc.01G051600 Theobroma cacao HOM05D008552 ORTHO05D010745 1.6e-36 157.5 302 40.4
MBI06_g07361_MAGBIO Magnolia biondii HOM05D008552 ORTHO05D010745 9.0e-35 151.8 319 36.7
Manes.13G125400 Manihot esculenta HOM05D008552 ORTHO05D010745 5.8e-34 149.1 325 36.3
PGR102G2623 Punica granatum HOM05D008552 ORTHO05D010745 5.8e-34 149.1 319 37.6
TPR.G19004 Trifolium pratense HOM05D008552 ORTHO05D010745 1.1e-32 144.8 309 35.6
FAN26G2968 Fragaria x ananassa HOM05D008552 ORTHO05D010745 5.4e-32 142.5 215 42.3
FAN23G0622 Fragaria x ananassa HOM05D008552 ORTHO05D010745 2.7e-31 140.2 215 42.3
FAN28G1904 Fragaria x ananassa HOM05D008552 ORTHO05D010745 3.5e-31 139.8 215 41.9
Lj4g0011398 Lotus japonicus HOM05D008552 ORTHO05D010745 3.5e-31 139.8 292 37.7
Psat0s3507g0040 Pisum sativum HOM05D008552 ORTHO05D010745 3.5e-31 139.8 326 34.4
FAN19G2593 Fragaria x ananassa HOM05D008552 ORTHO05D010745 4.6e-31 139.4 299 34.8
FvH4_1g15570 Fragaria vesca HOM05D008552 ORTHO05D010745 6.0e-31 139.0 299 34.8
VMungo0251G1275 Vigna mungo HOM05D008552 ORTHO05D010745 6.7e-30 135.6 279 37.6
Gohir.D12G089000 Gossypium hirsutum HOM05D008552 ORTHO05D010745 8.7e-30 135.2 306 37.3
Gorai.008G074000 Gossypium raimondii HOM05D008552 ORTHO05D010745 1.1e-29 134.8 289 38.8
Actinidia16511 Actinidia chinensis HOM05D008552 ORTHO05D010745 4.3e-29 132.9 245 43.7
Phvul.003G246300 Phaseolus vulgaris HOM05D008552 ORTHO05D010745 5.6e-29 132.5 305 34.8
Oeu050753.1 Olea europaea HOM05D008552 ORTHO05D010745 2.8e-28 130.2 236 37.3
Ca_22194_v3 Cicer arietinum L. HOM05D008552 ORTHO05D010745 8.1e-28 128.6 238 39.9
DCAR_010918 Daucus carota HOM05D008552 ORTHO05D010745 1.1e-27 128.3 236 38.6
DCAR_025711 Daucus carota HOM05D000369 ORTHO05D000253 3.1e-27 126.7 233 39.1
Gohir.A12G082600 Gossypium hirsutum HOM05D008552 ORTHO05D010745 1.5e-26 124.4 300 37.0
Atru.chr3.410 Acer truncatum HOM05D008552 ORTHO05D010745 2.9e-25 120.2 322 35.4
Migut.H00461 Erythranthe guttata HOM05D008552 ORTHO05D010745 2.4e-24 117.1 286 32.5
Aqoxy5G01300 Aquilegia oxysepala HOM05D008552 ORTHO05D010745 9.3e-24 115.2 319 34.5
Eucgr.H01996 Eucalyptus grandis HOM05D008552 ORTHO05D010745 1.8e-22 110.9 325 33.5
Dinv36925 Davidia involucrata HOM05D008552 ORTHO05D010745 1.1e-21 108.2 135 51.9
Haze_15435 Corylus avellana HOM05D008552 ORTHO05D010745 3.3e-21 106.7 265 37.0
Cpa.g.sc6.385 Carica papaya HOM05D008552 ORTHO05D010745 2.1e-20 104.0 293 32.8
Cfa003989 Carpinus fangiana HOM05D008552 ORTHO05D010745 6.2e-20 102.4 253 35.6
Dinv29960 Davidia involucrata HOM05D008552 ORTHO05D010745 5.3e-19 99.4 134 49.3
Medtr8g079700 Medicago truncatula HOM05D008552 ORTHO05D010745 9.0e-19 98.6 284 34.9
CiPaw.01G022400 Carya illinoinensis HOM05D008552 ORTHO05D010745 4.6e-15 86.3 331 30.2
Dinv24942 Davidia involucrata HOM05D008552 ORTHO05D000073 1.6e-12 77.8 192 35.4
Ciclev10027149m.g Citrus clementina HOM05D008552 ORTHO05D010745 8.2e-12 75.5 313 30.7
Glyma.05G080700 Glycine max HOM05D008552 ORTHO05D010745 3.1e-11 73.6 311 27.7
Dinv39883 Davidia involucrata HOM05D008552 ORTHO05D010745 5.3e-11 72.8 275 30.9
arahy.Tifrunner.gnm1.ann1.A84CEX Arachis hypogaea HOM05D008552 ORTHO05D010745 6.1e-07 59.3 312 26.9
QL03p002405 Quercus lobata HOM05D008552 ORTHO05D010745 3.9e-06 56.6 246 27.6


User provided reference genes

Program Settings