Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 4.7e-100 367.9 185 100.0
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.1e-69 266.9 185 75.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.6e-68 263.1 185 72.4
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 1.2e-50 203.8 129 76.0
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.2e-49 199.5 132 73.5
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.9e-48 196.4 133 72.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 3.2e-48 195.7 172 59.9
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.2e-47 193.7 151 65.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.1e-47 193.0 133 71.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.7e-47 192.6 127 72.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 3.6e-47 192.2 126 72.2
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.6e-47 191.8 140 68.6
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 7.9e-47 191.0 127 71.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 7.9e-47 191.0 127 72.4
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.0e-46 190.7 124 75.8
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.8e-46 189.9 149 65.1
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 73.2
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 73.2
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 73.2
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 73.2
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.8e-46 189.9 127 73.2
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 2.3e-46 189.5 127 71.7
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 2.3e-46 189.5 123 75.6
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 2.3e-46 189.5 140 67.9
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 3.0e-46 189.1 124 75.8
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 3.0e-46 189.1 123 73.2
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.0e-46 189.1 150 63.3
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 3.0e-46 189.1 138 66.7
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 3.9e-46 188.7 127 73.2
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 3.9e-46 188.7 129 72.9
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 5.1e-46 188.3 158 62.7
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 6.7e-46 188.0 143 63.6
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 8.7e-46 187.6 179 58.7
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.1e-45 187.2 149 65.1
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.1e-45 187.2 127 70.9
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 2.5e-45 186.0 142 63.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 2.5e-45 186.0 127 70.1
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 3.3e-45 185.7 139 68.3
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 3.3e-45 185.7 124 73.4
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 3.3e-45 185.7 152 61.2
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 3.3e-45 185.7 124 73.4
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 4.3e-45 185.3 183 55.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 5.7e-45 184.9 160 61.2
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 7.4e-45 184.5 120 74.2
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 7.4e-45 184.5 120 74.2
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 7.4e-45 184.5 127 72.4
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 7.4e-45 184.5 149 62.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 9.7e-45 184.1 142 65.5
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 9.7e-45 184.1 123 71.5
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 9.7e-45 184.1 149 61.7
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.3e-44 183.7 127 69.3
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 1.6e-44 183.3 127 70.9
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.6e-44 183.3 142 64.1
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.6e-44 183.3 129 66.7
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.2e-44 183.0 152 59.9
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 3.7e-44 182.2 129 66.7
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.7e-44 182.2 109 79.8
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 3.7e-44 182.2 128 68.0
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 4.8e-44 181.8 187 58.3
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 4.8e-44 181.8 159 60.4
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 6.3e-44 181.4 128 69.5
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 6.3e-44 181.4 186 57.5
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 6.3e-44 181.4 129 70.5
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 8.2e-44 181.0 188 55.9
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.1e-43 180.6 123 70.7
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.8e-43 179.9 150 62.7
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.8e-43 179.9 155 58.1
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 3.1e-43 179.1 124 67.7
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 4.1e-43 178.7 127 66.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 5.3e-43 178.3 184 53.8
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 6.9e-43 177.9 124 68.5
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 6.9e-43 177.9 128 66.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 6.9e-43 177.9 126 71.4
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 9.1e-43 177.6 120 68.3
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.1e-43 177.6 192 53.6
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 9.1e-43 177.6 155 61.3
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.2e-42 177.2 142 63.4
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.0e-42 176.4 123 68.3
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 2.6e-42 176.0 145 63.4
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.4e-42 175.6 146 61.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 5.9e-42 174.9 124 66.9
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 7.7e-42 174.5 151 59.6
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 7.7e-42 174.5 121 71.9
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 7.7e-42 174.5 192 52.6
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.2e-41 172.9 151 58.3
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.2e-41 172.9 151 58.3
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.2e-41 172.9 172 55.2
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.9e-41 172.6 143 62.2
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.9e-41 172.6 151 58.3
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.9e-41 172.6 120 70.0
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 5.0e-41 171.8 111 75.7
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.5e-41 171.4 123 65.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.2e-40 169.1 118 66.9
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 2.1e-39 166.4 119 65.5
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.4e-38 163.7 125 64.8
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.7e-38 161.4 118 65.3
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 6.7e-38 161.4 125 62.4
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 8.8e-38 161.0 100 74.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 2.6e-34 149.4 120 60.0
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 5.0e-33 145.2 96 74.0
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 5.0e-33 145.2 96 74.0
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 5.0e-33 145.2 96 74.0
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.6e-31 139.0 96 67.7
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.1e-27 127.5 128 55.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.5e-26 122.1 81 75.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.5e-24 117.1 121 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.9e-24 116.7 121 51.2
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.4e-22 110.5 95 55.8
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 8.8e-22 107.8 157 42.7
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.8e-19 100.1 121 44.6
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 3.5e-18 95.9 118 42.4
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 5.0e-17 92.0 70 65.7
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.1e-11 71.2 50 60.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 3.5e-10 69.3 126 39.7
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 8.0e-07 58.2 42 59.5


User provided reference genes

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